BGIOSGA003008

From RiceWiki
Revision as of 18:21, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003008, complete gene.

LocusTag

P0665D10.9

Ensembl Transcript ID

BGIOSGA003008-TA

Ensembl Protein ID

BGIOSGA003008-PA

Length

5121

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6870653..6875773

Sequence Coding Region

6870653..6870685,6870755..6870964,6871056..6871205,6872541..6872723,6875256..6875330
,6875510..6875773

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6870653..6875773 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6870653..6875773 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCAGGCGTCTCCTCCAACGAAGAAGGTGTTGGTGCCGATCGTCGCCGGCACGGAGCCGGTGGAGGCGGCGGTGCCCATCGACGTCCTCCGCCGCGCCGGCGCGGACGTCACCGTGGCTTCCGCCGATGATGGCGAGCTGGTCGTCGAGGTCATGTACGGCGTCAGGATCGTCGCGGACGCGCTCGTCGCCGGCGGCGACTGCGCCGCCGCTCACTTCGACCTCATCGTCCTCCCGGGAGGGGTTCCAGGCGCGGCGAACCTCGGCGGCTGCGCGGCGCTGGAAGCCATGGTGAGGAGGCACGCGGCGACCGGAGGTCTCTACGCCGCCATCTGCGCCGCGCCGCCGCTGGCGCTGGCGTCCTGGGGCATGCTCAACGGCCTCAAGGCAACTGCTCATCCGCTGTTCGTGGACAAGTTCCCACCGGAGGTGGCCGCCGTGGATGCGAGCGTGGTGGTGGACGCGAGCGCCGTCACGAGCCGTGGCCCGGCGACGTCGACGGAGTTCGCTCTCGCTCTGGTAGAGCAACTCTACAGCAAGAACAAGGCCGAGCAGATCGCAAAAGAAATGCTTGTCAGATACGATGCTGGGTATACCATCGATGAAGTCAACTCGGTTCAATGGAAATGTAACGGCACGCCCAAGGTCCTTGTTCCAGTAGCCAATGGCACCGAGGAGATGGAGCTGATAACAATCATCGACGTCCTGCGCAGAGCCGACGCGGACGTCGTCGTTGCGTCGGCGGAAAACGCCGGCGTCGAGATCGTCGCGCGCCACGGGATGAGGATCGTGGCTGACACGACGCTGGACGAGGCGGCTGCCGATGATCAGACGAGCAGCTTCGACCTGATCATCCTACCGGCAAGCAGCATACACGAACTCTCGCTGTCCAAACCCATTTTGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAQASPPTKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIVADALVAGGDCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLALASWGMLNGLKATAHPLFVDKFPPEVAAVDASVVVDASAVTSRGPATSTEFALALVEQLYSKNKAEQIAKEMLVRYDAGYTIDEVNSVQWKCNGTPKVLVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIVADTTLDEAAADDQTSSFDLIILPASSIHELSLSKPILI</aaseq>

Gene Sequence

<dnaseqindica>1..33#103..312#404..553#1889..2071#4604..4678#4858..5121#ATGGCGGCGCAGGCGTCTCCTCCAACGAAGAAGGTAACATATGATGATTATAGTGTGTGCATGTTCGCGCGGAGTGTTTGATTCGATCGTACGCGTGTGCAGGTGTTGGTGCCGATCGTCGCCGGCACGGAGCCGGTGGAGGCGGCGGTGCCCATCGACGTCCTCCGCCGCGCCGGCGCGGACGTCACCGTGGCTTCCGCCGATGATGGCGAGCTGGTCGTCGAGGTCATGTACGGCGTCAGGATCGTCGCGGACGCGCTCGTCGCCGGCGGCGACTGCGCCGCCGCTCACTTCGACCTCATCGTCCTCCCGGTACGTACAATATATTGCGGCCAATGGCGACACCGATGGATGCGGCATGGAAGAAGCTCATCTTGAATTCTGCGAGATATGCCGCGCGCAGGGAGGGGTTCCAGGCGCGGCGAACCTCGGCGGCTGCGCGGCGCTGGAAGCCATGGTGAGGAGGCACGCGGCGACCGGAGGTCTCTACGCCGCCATCTGCGCCGCGCCGCCGCTGGCGCTGGCGTCCTGGGGCATGCTCAACGGCCTCAAGGTTGCTAAAGCTAGCAAGTGGTCACTCCAGTCCACTGCTCACTATTGCTATTCTCCACTATCACAATTCACTGCTTAATTTCCAGCTGGTTTTTTTTTTCTAAAATTATACTCCCTCCATTTTAAAATGTTTGACACCGTTGACTTTTTAGTACGTGTTTGACCATTCGTCTTATTCAAAAAATTTAACTAATTATTTATTCTTTTCATATCATTCGATTTATTGTTAAATATACTTTTATGTACACATATAGTTTTACATATTTCACAAAAAAAAATTTGAATAAGACGAACGGTCAAACATATGTTAAAAAGTCAACGGTGTCAAACATTTTGAAACGGAGGGAGTACATAGGTACTTGAGATATACTCCATCCGTTTCAGGATATAAGACGTTTTAACTTTGGTCAAAGTCAATCTGCTTTAAGTTTGATCAAGTTTGTAGAAAAAAGTAGTAGCATTTTCAACCTAAGATAAATTTATTATGAAAATATATTCAATTATTGATTCAATGAAACTAATTTAATATTATAAATAGTATTATATTTATCTATAAGCTTAGTTAAATTTAAAACAGTTTAACTTTGATTAAAGTCAAAACGTCTTATAAACTGGAACGGAGGGATAAGTATTTACCACAAAACACATGTTTAACAGACGACCTCAAAGAAACGAAGGGTGTCGGTAAATACCTAATCTCACTAAATCATGTCCATAATTTAAAACACATGTGTACGTTTTGACATGGAGTATTTTTTAAGAAACCGTATACTTACATAAAATACTTCACCGATTGATTTACATGTATTCAATTAGATAAAAAATGGTTATGGAACCAAGTAACAAATTAATGTTTGTTCAAAAGATTAAAAATACCACATAGTGGAACATTTTGCCATTATCTAGAAAAATAGAACATTTTGCCATAAAAGGATTCCTCAAAATAAATTATAATAAACGGTGTTTGCGTTTTCCTCATTTTATATATGAAATTTACTCTACAGAGAGAGAAGGCACCAAAACTGTGGTGCAAAAAGGTTTGGGGCATTTGCAAATTTGCCACCGGTTTTTAATTTTGCAACGATGCCACTCGAATGATAGTTCTAGTGATATTTTTATAATTTTTTAGTGGCAGTCTTGCAATAACGATTCAAAACAGTGGTAAAACAGTGGTAAGTTTGCAATTGGCTCAAAGGTTTTAAAGTTGAGCTATGATGGTGTACGCACCTACACTCCCAGTAAGCTAATTTTGAAATACACAAAATTAACCACAAATCGTTAATTTATTAATCATGATTCATAACCGTCAAATATGATATGTCTTTGCATGATGAAGGCAACTGCTCATCCGCTGTTCGTGGACAAGTTCCCACCGGAGGTGGCCGCCGTGGATGCGAGCGTGGTGGTGGACGCGAGCGCCGTCACGAGCCGTGGCCCGGCGACGTCGACGGAGTTCGCTCTCGCTCTGGTAGAGCAACTCTACAGCAAGAACAAGGCCGAGCAGATCGCAAAAGAAATGGTAATTAATTATATATATGGTTCTACTAACTTTGGCACTTGATTAATAGCTACCTAACTCCGTCTTAGAGTATAGCACTTAAAGATCGGATGTCTCATCCAATTTTAAACTGTTAGATTGCTATATATTCTAGCACGGAGGTAGTAAAATTTCTCTCATTGGATCTTACCCATTGTTACTCTTGTTGATTTTTTTTTACCATGGCAAGACCTGTCCATTAATTGTAAAGATTTTGAAAAATGTTTTTGTTTGAATTTTTATTTTTAAAGTAAGATTGGTTAGGCTGCTAGCTACTTCCTTCATCTTGCAGTATCAGGCTTGTAAGCATCTTGATATTCAACTTTTAAAATTATTGACCAACAATAATCAGTCTAATAAAAGTCAAATTTTATTTGATGAGAATAATATAATTGGATTGACATTTAAATCCCCTTTCCTACTATAGTTGTAGAATATGATAAACTAAAAGTTAAAGATTAGTTTTATAAACCAAGCTAAATTTGACCGCGTATTATTTGGTGGGAAAATGGTGTGGTACCTCCTATTTTTAATATATGATACTATTTTCTTTTTTGAAAAAAAATTGACCAACAATATTTATTTATTTAGATCTCTGATCAAAAGTACTTTGAGCATGGCTAGTATGTTTGCCTATTTACATAAATATTTAAAAGAAAATAATAGCCAAACGAATTAGAATAATCATTTTAAAAGACAGGTATTTTTAGTTTACTATCAAATGGGTGCTAACATTTTCGACAAAGTTGTGTTTGGTATGTTACCTGAAGTAGTAAACGACCATGGTCCATGGACTATGCCAAACTTAACTAAATTACATAATCTGGTAATCTATATATTTATATAAGCAAGTATATATACTCTCTATATATAGGTGGACCAAATAGACTATAATTAAGCTTTTTTTTAAGAGTATATGGAGTACATCTGCCCATGTACGTCTATATTCATTATTAGTTTTTTTTAGAAGAAATGAACTCGAGAAATATAGGATACTCCCTTCTTGTAAAGGAGGTCGTTTTGGACAGCGACACGGTCTCCAAAACATAATTTTGACTTCTTATTTCTATAAAAATATTTATTGACAAGTGATATATATGTATACTTTTCAAGACAAATCTATTCATATAATTTTTACATTTTCAAACTTAACAACTTAAGAGTTATTCATGATTTATATTTCCAAGGTTTGACTTAAACATTATTCTAAACAACTTTTTTTACAAGTACGGAAGGAGTAATTAGGACACAGTTCCTCGTTTCCAGGAATGGGTGGCATAATTTATGAGGAAATGGACGGTACATTGCGGCGGTCTAATAATTGTCTAACGTTGTATTGAATGTTCACTTCACATGTGCCGTTGTCAGCTCAAAATCGGTTGTGGAAAGTCAGGGCAGGAATTTATTGTCTAGATAAGCCCCCATGGCCTCATGGTCATATGGGCCATATGCCGATAGCTGTTGATACTTGATAGTATGATGGTGTGTGTTGACTGCTGCTATGGTCATGGGGCCAAATGTTTCTGAAATGCAGTCAGAGAACTTCATGAGCACTAGAACGGAATATACTGAAAATAAATACTCCATATTTTCCCACCTACTCCATATAATACTTATTGGGTTGAAATAAAATTCTATATGGTCATACTTGGATAATATGTCATACTAATTTGTATAGTATTTGCGATTTCGTTGCTAAAAAAACCATAGGCGATCCCTGATGTGCTCTCTTTTTTTAAAAAAAAATCATTGCTAAAATAAGTGTGGTTAAATTTTAAATGTGAATATAGTAGTTGGATTATTTGAGATCTTCTTTTTTTTTTAGAAAATAGATTAAAACCTGGCCTCTATATCTAACACAGATGTACGCAGCTAAGGTGGATTATTTGTGAATGAAACATACATGACAAAGTTCTGCAATTGCTCTCTTCAAACCCTAAACTCGTGCTAATAGTTCATTAAGAAATGTACTCCCCCATCCCAAAATATAAGAATCTAGAACCGGATAAGACATTTTTTTTATATTTTGGGATGAAGATAGTATACATTAATCTTAAAAGTAGTCAGTGTACCAAGCCAGTCTACTTGATTTGACTATGATAGGACTTTTGGAGAGTGTAGTAGTACTTATATAAGAGAAATTTTACGGTCGTTGAGAAGGTACCGATAGTGTAAATTTTCATAAATTAATTAACATTGGAAAATGTTATTGTAATATATTGTGGAGCATTCTTTTAAACAAAGAAAGTCCATAATACAAGTGTTGACAAATAGGTGGACCAGAAATTAATCAACAAAGTTACCTTGTCCACGGTCCCACCCATCAACTACCTAGGACTAGGAAGCTGGCATTTGTAAGCATGGCAGATTTGAGCTCTGCTCCTTGACTCATCACTTTATGAACAGCAAATCATCCCCCCCCCCCCCCCCCCCCCCCCGCTTTTGTTGTTTTTACTGTCATAGCTTGATCAACATATGAGTTAACTCCCTATATCTTGTGCCTCAAATTGTCAGCTTGTCAGATACGATGCTGGGTATACCATCGATGAAGTCAACTCGGTTCAATGGAAATGTAACGGCACGCCCAAGGTACATATACAAGAGATGAAACCTAAACACTTATCTTAACACTAGCTAGCATTTCATACCTCATAAGTGATCGATGGAGCTCTTCCAAATCACCATGGAGAGAAAAAAAAAGGATAGCATTTCTTATACAATATAAAAGCCAGAACTTCTCTGAAAATTTGCCTCTGTCTCTGTGTCAGGTCCTTGTTCCAGTAGCCAATGGCACCGAGGAGATGGAGCTGATAACAATCATCGACGTCCTGCGCAGAGCCGACGCGGACGTCGTCGTTGCGTCGGCGGAAAACGCCGGCGTCGAGATCGTCGCGCGCCACGGGATGAGGATCGTGGCTGACACGACGCTGGACGAGGCGGCTGCCGATGATCAGACGAGCAGCTTCGACCTGATCATCCTACCGGCAAGCAGCATACACGAACTCTCGCTGTCCAAACCCATTTTGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003008