BGIOSGA003060

From RiceWiki
Revision as of 18:21, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003060, complete gene.

LocusTag

OS01G0229000

Ensembl Transcript ID

BGIOSGA003060-TA

Ensembl Protein ID

BGIOSGA003060-PA

Length

6317

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7630509..7636825

Sequence Coding Region

7630509..7630624,7630673..7630727,7632232..7632335,7632721..7632849,7633113..7634430
,7634692..7634901,7635117..7635322,7635952..7636036,7636276..7636485
,7636694..7636825

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7630509..7636825 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7630509..7636825 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGTCTTCTGGACCTCCGTTGGCTCCTCAAGAAGGAGAAATCAGCAACGAACCAAAAAGGCGACGACCTCTCAATGGGTAAAAGGCTAAAAGCTCTTTTGACTATTGTAATGAGGACCACCGGTCCGACACGGCGTTCCACCAAAGGAAATTGGACCCCTGAAGAGGAAGATGAAATCATTGTTCAGATGGTAAACAAACTTGGACCAAAGAAATGGTCAACCATTGCTCAAGCTTTGCCTGGACGTATAGGAAAGCAATGTCGAGAACGGTGGTACAACCATCTTAACCCTGGCATAAACAAGGAGGCATGGACACAAGAAGAGGAAATTACCCTCATACATGCTCATCGAATGTATGGAAATAAATGGGCCGAGCTGACAAAATTTTTACCAGGAAGGACGGACAATTCAATTAAAAATCACTGGAACAGTTCAGTAAAGAAGAAAGTCAACTCATACATGTCATCAGGTTTACTTACCCAAGTTTCGTGTCTCCCTCTAAATGAATATTCTGCAAATTGTAATTCCTCACCAGCGATGACCCAACAAAACAGTGAAGATAGTGGTTGTTTTGCTGTTCGAGAGGTTGAAAATTCATCAGGGTGTAGTCAATCATCACTTGCCAAGGTTTCTTGCTCCCAAGTGCATGATAACACTGTGCCATTGGGCTGTGATTTGCAAGTAAACACGAATTTTGACAAGAATGAAGCACATGATTCTCAATCTTCCATGGGTTCCGAAGCATGCTATACTTCTGCGGAGGCTGTTGCATCTGCTTTGCCTGCTGTGCATTGCCATGTTTCTTCCTCTAACTTGGATCCAGATCAACACTTGCAAGAGGACTTTGCTCAAGGACTGAATTTGGACATGACTATAGATGAAATGCCAACTGTTCCTAGTTTTGCAGACAACCAGACTGTTTGTAGTATAGAAAATCATGAAAGATCTCTGGAGCCATATGATGTAGCAATGGAGGTGCCTCTCTCTATGTTATCAAGTGATTCTGGAGCTGAGCAGAAACTACATTTCATGTCTGAGGCTGACTTCAACAGTCCTAATTGTCTGAAATCTGAACTCTGGCAGGATATTTCCTTACAGGGCCTTCTTTCTGGACCTGATGCAGTTGAAGCTGATTCATTTTCAAGATCAAATCACCAATCGGATGTATATTCCTCTGAAGCAGATACCCATTTTTTAGCACCACCCTACATGCCACAGGCATCAAATTCTTCAAGTGTGATGGGGGTTGCTGATGACCAGAGTCCACAGATGTCAGTACCTCCATCTCTTATCTGTTCAAATGTTATGACTGATGATGCACCTTTCGATAATAGACCAGGGCGGAAGGAAATGCCACTTTCTCAGGCAGAAGTGGTTACCCAATCTTCCAGTTCTTCTGGTGATGCTGAAATGTTTGCTAACCCTGGTTGTAGCAATGACAGACATGTTCCTTCTTCAACGATGGAAAGCATACCTGAATGCGGGGACCAACAGGTTACTAATGCAGAAGAACCTGAAGCCAGTCTAGAGAAAGAACCATCGCTTACACAGAGTGTGACTGCACCAGATGAACAGGACAAGGGAGCCCTCTTCTACGAACCTCCTCGTTTTCCAAGCCTGGATGTTCCATTTGTCAGTTGTGATCTTGTAACCTCTGGTGATCTCCAAGAGTTTAGTCCCCTTGGCATTCGGCAGTTAATGCATTCAACCATGAATTTTTGCGTATTGAGCGATCTGCTTCTTCTAAAGTCTCTGGAAAAGAAACTTGTTTTCTCTGATGAAAACAAGGAAAATTTGGGCTACACAACTGAACAGACAAAAGATGGACAGAGTGCTGGAAATGACGAACACATGGACGAGCAGACAACAGGGGAACGCAGTTCTGCAACAAATGTAGCTACTAATGATGACCTGTCAGGCAATTTACAACCTGCAGGTATTCTTATTGAACACAGCGGTGATGATCCCATTTCCCCAGATTATGGCAAAAATACCATGAATCAGAAGCTGAACACAAATGTGAAATCTTTATCAGTCTGTAAGGAGGGAGTGTGTGCTAAATCAAAGCCCACTGAACTCATCGTGGAGAAATCTTCACCATGCATAAATGTGGATTATGAATATGTGAACATATTGGCTGATACCCCAGGTATCAAAAGAGGACTAGAATCTCCTTCAGCATGGAAGTCCCCTTGGTTCGTCGATATGCATTTTCAGGGTTCATACTTCACCAGCCCAGCTGATAGTTACGACGCACTAGGATTGATGAAGCAGATAAATGTGCAGACTGCTGCTGCTTTGGTGGAAGCCCGTGAGGTACTGGCAAGCGGCGGCCAATGTGACAACATAAGCTCTGATAAGGAAAACACGGGGAATCCAGATGCCAAGAAGGAACCAGGGACAACCAAATTGCAAACAAAAATCATGGCAGAGGGGAGAGTCCTGGATTTCGAGTGTACCACACCTGTAAGATCATCAGATAAAAATGCTGGCAGCAGTCTGGGAAGATATCTGAGCTCACCTATTCCTTCGTCCCATCTCCTGAAAAGTTTTAGATAG</cdnaseq>

Protein Sequence

<aaseq>MESLLDLRWLLKKEKSATNQKGDDLSMGKRLKALLTIVMRTTGPTRRSTKGNWTPEEEDEIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWYNHLNPGINKEAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSSVKKKVNSYMSSGLLTQVSCLPLNEYSANCNSSPAMTQQNSEDSGCFAVREVENSSGCSQSSLAKVSCSQVHDNTVPLGCDLQVNTNFDKNEAHDSQSSMGSEACYTSAEAVASALPAVHCHVSSSNLDPDQHLQEDFAQGLNLDMTIDEMPTVPSFADNQTVCSIENHERSLEPYDVAMEVPLSMLSSDSGAEQKLHFMSEADFNSPNCLKSELWQDISLQGLLSGPDAVEADSFSRSNHQSDVYSSEADTHFLAPPYMPQASNSSSVMGVADDQSPQMSVPPSLICSNVMTDDAPFDNRPGRKEMPLSQAEVVTQSSSSSGDAEMFANPGCSNDRHVPSSTMESIPECGDQQVTNAEEPEASLEKEPSLTQSVTAPDEQDKGALFYEPPRFPSLDVPFVSCDLVTSGDLQEFSPLGIRQLMHSTMNFCVLSDLLLLKSLEKKLVFSDENKENLGYTTEQTKDGQSAGNDEHMDEQTTGERSSATNVATNDDLSGNLQPAGILIEHSGDDPISPDYGKNTMNQKLNTNVKSLSVCKEGVCAKSKPTELIVEKSSPCINVDYEYVNILADTPGIKRGLESPSAWKSPWFVDMHFQGSYFTSPADSYDALGLMKQINVQTAAALVEAREVLASGGQCDNISSDKENTGNPDAKKEPGTTKLQTKIMAEGRVLDFECTTPVRSSDKNAGSSLGRYLSSPIPSSHLLKSFR</aaseq>

Gene Sequence

<dnaseqindica>1..116#165..219#1724..1827#2213..2341#2605..3922#4184..4393#4609..4814#5444..5528#5768..5977#6186..6317#ATGGAGAGTCTTCTGGACCTCCGTTGGCTCCTCAAGAAGGAGAAATCAGCAACGAACCAAAAAGGCGACGACCTCTCAATGGGTAAAAGGCTAAAAGCTCTTTTGACTATTGTAATGTATATTGTACTAAATTTTGTTTTGTTTCTTTGTCCATGTAAATTTAGGAGGACCACCGGTCCGACACGGCGTTCCACCAAAGGAAATTGGACCCCTGAAGAGGTATACCACATGAATGTCATCTTGTGTTTCTGTTGACAAAGAGTCCTTTTCCTGTACGAATTATTAAATGGTGACCGAAAATCCTATTTTATGTATTGTTGAGAATGATTGACTGTAGACATCTAATGTGTTTAATGGCAAAGACCTAGAATTTTTTAATATGAAAAAGACATTTCAATTTAAATCCTGACTCTTGTGTGGAGGCTTGAGTTGCTTAATTTGGTGCTTTCTTCCTACAAACCAAGTTGAATATGATAATTTACTAATTGCTAAAATCCAAGGGAGCCATGGGCAACTTTAGGTCAACGAGTGGATTGCATGTACTCTGAGGCAAATCATAAACTTCACTCTTCTACCTTGGGGTTTCCTGCTTTTCTGTTTTTGTCATATACTCATGTGTGCAATTATATTCTGATTCTATGCTTTGTAAATTGTAATCAGCAGCATTTTGGTTCTATTTTGTATATGCCTTTTAATGCCTCACTGATATGTGAGCCTGGACCCATCTTATCAGCCTCTCATGCAACATTTAAAATTTCCATGTGTCTTATACATAAATTTTCTTGCTTACACGGTTTAACATTGTGCATATGTGATATTCAAATGTAGGACGCCATATTGTCCAGAGCTGTTCAGACATACAACGGGAAGAACTGGAAAAAAATAGGTATGCTCTTTCGATTGCTGCAATGATATGGAAAGTCATGCAATGATTCTTTGGCTATTTCCTTAGTCCTTACTCTTTATCATTGTATTTCTATTGTATCTTTTAGCTGACATACTTTTCTTTTTCTTGAATTCTTTATGGTTGTTTTTTGTATGTTGGAATATACAAACAAAATAAAATGGCCTTCTAAAATCCATTTGGTATCTACATAACACTGCATTTTATAGCCTATCATGCATATGTTAGACTCCCTTGGATTTTTTTCTTTTAATTTTTTTTTGCGCATTTGGTTTATGATTACATACTGTTGAATGGCAATTCATGTCAGGTTCTAACAGGAATAATATTTATATTTCACAATATTATACATAACATATAATGCATTTTTACCATATTGTTCTCCAGGCTTCCTTTTTCTAACCATTGTTTATATTAGTACTTTAGTGCACTAGATATCAATAAACCAATCAGCATATTTTATATTTTATTTTCGATGTTATGCTAACTCATTTACAGGAAAGCATTCTGCTGTTTCATTAACTCACACCCTAGACATGCTTTTCTGGCATTCTTTTTTCCTACCCTGTTGATGAGATTTCCAGTATATTGTTAAAAATCCAAGTTTTGACAGAGAACATTCTAATTTTCCAGCGGAATGCTTTCCGGATAGAACCGATGTACAATGCTTGCATAGGTGGCAAAAGGTTCTAAACCCTGAATTAGTCAAAGGGCCATGGTCCAAAGAAGTAAGCATGCTATTTGATTTATTTTCATCTCTTAAATAATACTGTATTGGTTACTCATCTTACGTTCACAATGACATGCTCCTTTTTTCAGGAAGATGAAATCATTGTTCAGATGGTAAACAAACTTGGACCAAAGAAATGGTCAACCATTGCTCAAGCTTTGCCTGGACGTATAGGAAAGCAATGTCGAGAACGGTAATGCCATGAAAATTACCTATTCCATTTAGCTTGCACCAAGGAAAAAAAAAGATAGAACAATATATTTTGTGGGTCTCAACAGGGTAGCTTCTTTGTGCTAGCAACTACTGCCTTTTCTTCTAGTCCTTTGTTCTGCAGATGAATGCAGGTTTTCTTTTGACATAGTTCTTCCATAGACCATATATGTTGTACAATGATGGCCGCCAAACCATGTGGTGGATTTAAACAATCCATATATGTTGTACAATTTATTTTAACAATGTAGTATTTTGTAAACTATCCTAACTTTGTTTCTTAATATGCATGGTAGTATTATTTTTAATTTGAGTATCATTACTATGTATTGGATGCCTTACAGATGTATCATCTAATCTGCATTTAGGTGGTACAACCATCTTAACCCTGGCATAAACAAGGAGGCATGGACACAAGAAGAGGAAATTACCCTCATACATGCTCATCGAATGTATGGAAATAAATGGGCCGAGCTGACAAAATTTTTACCAGGAAGGTAATGTTTCTTCCTTACCTAAGAGCTGCTTGAAATTAATCTATGTTCTTTTCCATGAAATGATGCATGCGAAATTCTTGTTTTACTGCCATTTTGACACATCTATTCAAGTTTAGCATTCTTGCCCTCTCTAGCTGTTTATGACCTAATGCACAATGATCTAGTACTTTTGTGCAATTAATTCTTCTTGTTATTTTTTTTAAAAAAACCTCTTTTAGACTATTGAAGTCATTGAATTTTTAATATTCTGTTTCCCCTATCAGGACGGACAATTCAATTAAAAATCACTGGAACAGTTCAGTAAAGAAGAAAGTCAACTCATACATGTCATCAGGTTTACTTACCCAAGTTTCGTGTCTCCCTCTAAATGAATATTCTGCAAATTGTAATTCCTCACCAGCGATGACCCAACAAAACAGTGAAGATAGTGGTTGTTTTGCTGTTCGAGAGGTTGAAAATTCATCAGGGTGTAGTCAATCATCACTTGCCAAGGTTTCTTGCTCCCAAGTGCATGATAACACTGTGCCATTGGGCTGTGATTTGCAAGTAAACACGAATTTTGACAAGAATGAAGCACATGATTCTCAATCTTCCATGGGTTCCGAAGCATGCTATACTTCTGCGGAGGCTGTTGCATCTGCTTTGCCTGCTGTGCATTGCCATGTTTCTTCCTCTAACTTGGATCCAGATCAACACTTGCAAGAGGACTTTGCTCAAGGACTGAATTTGGACATGACTATAGATGAAATGCCAACTGTTCCTAGTTTTGCAGACAACCAGACTGTTTGTAGTATAGAAAATCATGAAAGATCTCTGGAGCCATATGATGTAGCAATGGAGGTGCCTCTCTCTATGTTATCAAGTGATTCTGGAGCTGAGCAGAAACTACATTTCATGTCTGAGGCTGACTTCAACAGTCCTAATTGTCTGAAATCTGAACTCTGGCAGGATATTTCCTTACAGGGCCTTCTTTCTGGACCTGATGCAGTTGAAGCTGATTCATTTTCAAGATCAAATCACCAATCGGATGTATATTCCTCTGAAGCAGATACCCATTTTTTAGCACCACCCTACATGCCACAGGCATCAAATTCTTCAAGTGTGATGGGGGTTGCTGATGACCAGAGTCCACAGATGTCAGTACCTCCATCTCTTATCTGTTCAAATGTTATGACTGATGATGCACCTTTCGATAATAGACCAGGGCGGAAGGAAATGCCACTTTCTCAGGCAGAAGTGGTTACCCAATCTTCCAGTTCTTCTGGTGATGCTGAAATGTTTGCTAACCCTGGTTGTAGCAATGACAGACATGTTCCTTCTTCAACGATGGAAAGCATACCTGAATGCGGGGACCAACAGGTTACTAATGCAGAAGAACCTGAAGCCAGTCTAGAGAAAGAACCATCGCTTACACAGAGTGTGACTGCACCAGATGAACAGGACAAGGGAGCCCTCTTCTACGAACCTCCTCGTTTTCCAAGCCTGGATGTTCCATTTGTCAGTTGTGATCTTGTAACCTCTGGTGATCTCCAAGAGTTTAGTCCCCTTGGCATTCGGCAGTTAATGCATTCAACCATGAATGTCTGCACGCCAATGAGATTGTGGGGCTCCCCTACTCATGATGAAAGCACTGGCGTTTTGCTGAAGAGTGCTGCCAAAAGCTCATATGCACGCCATCAATACTGAAGAAACGTCACAGAGATCTCTTGTCTCCTATTCCAGATAAAAGAATCGAGAAGAAATATGGGACTGAAAAGGATCGTGGGGTATCAGACACATCCTCCACCGGCATTCAAACAAGTAGTATCAATGCCACTAAAGATGATGCACTTATAACTACAGTTTTGCGTATTGAGCGATCTGCTTCTTCTAAAGTCTCTGGAAAAGAAACTTGTTTTCTCTGATGAAAACAAGGAAAATTTGGGCTACACAACTGAACAGACAAAAGATGGACAGAGTGCTGGAAATGACGAACACATGGACGAGCAGACAACAGGGGAACGCAGTTCTGCAACAAATGTAGCTACTAATGATGACCTGTCAGGCAATTTAGTAAGTACTTCCAGTTTATGATGATATTTAGCTTGTCAGTAGTACCTTATTTCTTTGAGGAGGTGGACCAAGTTAATGCCCTGAATGACTGAGTGTAGCAAGTGCTTTTTAACCATGTTAGTAGTATGAAATATGGTTGCTGGGCAGACCCGGGCAAAATAGCAAATGAGTTTTGCTGATGATCTTGTTCTTATCTATATTGTTGTTTGATGCAGCAACCTGCAGGTATTCTTATTGAACACAGCGGTGATGATCCCATTTCCCCAGATTATGGCAAAAATACCATGAATCAGAAGCTGAACACAAATGTGAAATCTTTATCAGTCTGTAAGGAGGGAGTGTGTGCTAAATCAAAGCCCACTGAACTCATCGTGGAGAAATCTTCACCATGCATAAATGTGGATTATGAATATGTGAACATGTAAGACTTCACACCACTCACATGTTCCTTTGTTGTTTTCCATCAGATTCTTTTGTTTGGTTATCTTCTCAGATTATGTGAAAATCAAAGTTTTATGGAAACTGATCTCTAGTGAATGATGAGTTCCTCCTTTTCTTGATATTAGCAAGCATCAATGCATTGAACCCATACCCCTGCATGCTTCTGAATAGTTGTGAAGTCTGCTAAACCTAAACTTAAACTGGGTCTTGCAGGGTTTTCATGTTGAACTTAGTTCAGTGGTGTGGCATATTTCACTTTCCTGAGATCTACTTAGATACTTAATCCAGTACAAGATTTATGAAGTTGATGCTCATCCTTGTCTATGCAATCAGAATATCCCTTTAAGAGCTTCCATATTTAGACAGAAACTGAAAAATATTTTTGTATCAAATGAATTATCATGAGCCTTTTAGCCACCATCTTACTGGAATTGGCACGCTATTTCATCTGAAATGTGGTTTTAATTCCCTAATGCATTTAGAATGATACATTTAGAATAATACATTAGGGAATTAAACCCACTACTGAAGTCTGAAGAGATTGTTTTATGATCCTTGTTCCTTCAGTTAATTTGTCGTTCTGAAATTCTGAACTGTTGCTCTTATTAGATTGGCTGATACCCCAGGTATCAAAAGAGGACTAGAATCTCCTTCAGCATGGAAGTCCCCTTGGTTCGTCGATATGCATTTTCAGGTACATTTACCTCTTTTTTTAATTTTATTTCTCATGTTCATATGGTGTCATATAGAAATCCAGTATTTGGAAAAAGCATGGACTACTGGGTTAAGTACTTAAGTGGATGGAAATATATTGGAGGACTACTGGGTTGTGCCTGATAATAGTTTTTCATTAATCCTTCATGCTGTCACGCATTTGGTACTTTGTTTACTGTTATTTTCTTTGGTTAACTTCTGTCCATACGTTCCTCCCAGGGTTCATACTTCACCAGCCCAGCTGATAGTTACGACGCACTAGGATTGATGAAGCAGATAAATGTGCAGACTGCTGCTGCTTTGGTGGAAGCCCGTGAGGTACTGGCAAGCGGCGGCCAATGTGACAACATAAGCTCTGATAAGGAAAACACGGGGAATCCAGATGCCAAGAAGGAACCAGGGACAACCAAATTGCAAACAAAAATCATGGTACACGGCAGTGAACTGCCTTTGCGTTAATATTCTTAGCTTATAGCTCTTGCAAAATCTTGGTTTGTGAGTGCCAAAATGGTAGCAATTTGTTGAAAAATAGAAAATCTGTAATTGGTCACATTTGAGCATAAATTAAGATCCTCAGTAATGTCATTGTTTGGTTGTATTATCACTATTGATCGTAATTTTTATCGATATTTTTCAGGCAGAGGGGAGAGTCCTGGATTTCGAGTGTACCACACCTGTAAGATCATCAGATAAAAATGCTGGCAGCAGTCTGGGAAGATATCTGAGCTCACCTATTCCTTCGTCCCATCTCCTGAAAAGTTTTAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003060