Os08g0543050

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Revision as of 13:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0543050| Description = Disease resistance protein family protein| Version = NM_001188747.1 GI:297726624 GeneID:9271308| Length = 3633 bp| ...")
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Gene Name

Os08g0543050

Description

Disease resistance protein family protein

Version

NM_001188747.1 GI:297726624 GeneID:9271308

Length

3633 bp

Definition

Oryza sativa Japonica Group Os08g0543050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27263636..27267268

Sequence Coding Region

27263636..27267268

Expression

GEO Profiles:Os08g0543050

Genome Context

<gbrowseImage1> name=NC_008401:27263636..27267268 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27263636..27267268 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaatcgctaatcctccccatggtgcgcggggtggcggcgaaggccgccgatgcactcgtacagagagtcaccggcgcgtgcggcgccgtcgacgacgaccgccgcaagctgcaacgccagctgctggccgtccagcgcgcgctggccgacgccgaggcgaagagcgagaccaacctcgccgtcaggcgctggatgaaggacctcaacgccgccgcctacgaggccgacgacgtcctcgacgacttccgctacgaggcgctgcgccgcgacggcgacgccaccgccggcaaggtactcggctacttcaccccgcacaacccactcctgttccgcgtaaccatgagcaagaagctgagcaatgtcctcgagaagatgaacaagctggttgacaagatgaacgagcttggcttgtcagtggatcgcacagaatcaccacaagaactgaaacctccttatctccagatgcattctgctgcactggatgaatcaagtgacattgttggcagagacgacgacaaggaggtggtggttaagctgttgctggatcagcgatatgagcagagattgcaggttctccctgtcatcgggatcgggggttcaggcaagacgacgctcgccaagatggtgtacaacgacacgagggtacgtgaccatttccagctgaagatgtggcactgtgtttcagagaattttgaagctgttccccttctgaaatccatcgttgaattggctacaaatcgaagatgtcaagtgcctgacaaggacaccatcgagctcttgcgacggcagcttgagggagccattggtagcagaaggtttctgttagttcttgacgatgtatggaacgaggatgagaacaagtggaaggatgaactaaggccactcttgtgctctgctgctggtggtcatggaagtgttgtagtggtcacaactcggagccaacaagtagcatctatcatgggcaccatgagatcccatgaactagcatgtctgaatgatgatgattcatgggaattgttctcaaagaaagcattcagtgaagaagtacgagagacagcagaattggtcaccattggaagacttattgtcaagaaatgcaaggggcttcctcttgctctcaatgctatgggtggcctgatgagctcaaagcaacaactccatgaatggaaagccatcgcagacagtgccagagacaaagatgaaatactttccatgcttaaattaagctacagacacttaccatccgaaatgaagcaatgttttgccttctgttccatattcccaaggaaccatgagatggacaaggaagtcttgatccaactgtggatggcaaatggtttcatccaagaagatggaataatggatttggaacaaaaaggagaatacaccttccaatatttggtttggagatccttcctccaagatgtcaaagcaaagaaaactctggaccatttggcagagctccagccgtcgaccattctacaaaaggaaattatggacaaggcattaccatatgagtccattggttgcaaaatgcacgatttgatgcatgacctagcaaaagacgtggcagacgaatgtgtaacttcagaacatgtacttcagcacgatgcatctgtcagaaatgtccgtcacatgaatatatctagcacttttggtatgcaagaaactatggaaatgttacaagtaacatcatctctccgtacttggatagtgccatcacccttgtgcagggatctcaaggatttaagcctggcatcattaagaacccttgtaattgaaaagggaatcttccattaccattcggttatgtctaaccatgtgatcacttattcgaagcatctacgatatcttgacctatctatgtctcaaattgttatgttgccaagttcaatatgtgtgatgtataacttacaaacattgagactcaatggttgcagctttctaaaatatttaccggaaagtatgggaaaaatgaggaagctcctccatctttatcttctgggatgtgatagtttggtgcggatgccaccaaactttggtcttttgaacaatcttcgcactctaacaacatttgttttggacactaaagctggttgtggaattgacgagctcaagaacttgcgtcacattgccaacaggttggaactgtacaatttgagaaaaattaattgcaggaacaatggaatagaagccaatctccatcagaaggaaaatctaagtgaactactattgcactggggtcgtgataaaatttacacaccggaaaacagtgcctacaatgaggaagaagtgttggagtcacttacacctcatggtaagctcaaaattttagagctgcatggatatagtggcctgaagatcccacaatggatgagagacccacagatgttgcagtgcctaacaactctccgcatttccaactgtttaggatgcaaggatctatcaacactgtggttatcggtctcgcttgagcatctgcagttatcccgtatggataatctaaccacattgtgtaagaacgttggtgtgggagctgaaggatacaccatccctcagcaagttttcccaaagttaaagtctctgaaactagagttgttatttagcttggagaaatgggcagaaaatactgcaggtgaggctaagaatttggttacatttccagagctcgaaatgctacagatcattcgctgtagtaaacttgcaagtgtcccagactgtccggttctaaaagaactggacagatttggatcttatatgcttgcaatgaacgaactcacacatctgacatcattgtccaagctcaattacgttgcaaacagtctttgtgattgtgtgagcatgcctttgggctcatggccatctctcgtagaactagttcttagatcttcaacacacattccaaccactctgcaggtggaggcaaatcaaggccagctagaataccttcggagtttgagtctagtaaactgcttcacggctgcatccggctcatccgaaatgcgtcttgggctctggaaatgctttgcctttgtggaggtattgcatattcatatgtgcctcagtcttgtgtgctggccaactgaggagttgacgagcttgattcaccttcgacacctatatattgagcactgtcatagacttgagggaaaaggttcatcatccgaggaaaaattcatgtcactgtcccatctagagaggttacacatacaacactgctacaatctactggagatcccaatgctgcctgcatccctgcaggatctgcggttagaatcttgccgaagattggtggcattgccttcgaaccttggaaatctggccatgttaaggcatctttatttgatgaactgctatgtcctgaaagatcttcctgatgggatggatggcctcgtttcccttaaaattttggagattcaggcatgtgcagagatagaggaattcccacagggtctcctccagcgacttccaacactgaaagaactgtccatacaagggtgccctggattggaaacacggtgcagagaaggtggtgagtattttgatcttgtctcttccgttcaacgtatatgcattccagcagcagcgaaaacagaaatggaggaggaatcaaggtctggaatctaa</cdnaseq>

Protein Sequence

<aaseq>MAESLILPMVRGVAAKAADALVQRVTGACGAVDDDRRKLQRQLL AVQRALADAEAKSETNLAVRRWMKDLNAAAYEADDVLDDFRYEALRRDGDATAGKVLG YFTPHNPLLFRVTMSKKLSNVLEKMNKLVDKMNELGLSVDRTESPQELKPPYLQMHSA ALDESSDIVGRDDDKEVVVKLLLDQRYEQRLQVLPVIGIGGSGKTTLAKMVYNDTRVR DHFQLKMWHCVSENFEAVPLLKSIVELATNRRCQVPDKDTIELLRRQLEGAIGSRRFL LVLDDVWNEDENKWKDELRPLLCSAAGGHGSVVVVTTRSQQVASIMGTMRSHELACLN DDDSWELFSKKAFSEEVRETAELVTIGRLIVKKCKGLPLALNAMGGLMSSKQQLHEWK AIADSARDKDEILSMLKLSYRHLPSEMKQCFAFCSIFPRNHEMDKEVLIQLWMANGFI QEDGIMDLEQKGEYTFQYLVWRSFLQDVKAKKTLDHLAELQPSTILQKEIMDKALPYE SIGCKMHDLMHDLAKDVADECVTSEHVLQHDASVRNVRHMNISSTFGMQETMEMLQVT SSLRTWIVPSPLCRDLKDLSLASLRTLVIEKGIFHYHSVMSNHVITYSKHLRYLDLSM SQIVMLPSSICVMYNLQTLRLNGCSFLKYLPESMGKMRKLLHLYLLGCDSLVRMPPNF GLLNNLRTLTTFVLDTKAGCGIDELKNLRHIANRLELYNLRKINCRNNGIEANLHQKE NLSELLLHWGRDKIYTPENSAYNEEEVLESLTPHGKLKILELHGYSGLKIPQWMRDPQ MLQCLTTLRISNCLGCKDLSTLWLSVSLEHLQLSRMDNLTTLCKNVGVGAEGYTIPQQ VFPKLKSLKLELLFSLEKWAENTAGEAKNLVTFPELEMLQIIRCSKLASVPDCPVLKE LDRFGSYMLAMNELTHLTSLSKLNYVANSLCDCVSMPLGSWPSLVELVLRSSTHIPTT LQVEANQGQLEYLRSLSLVNCFTAASGSSEMRLGLWKCFAFVEVLHIHMCLSLVCWPT EELTSLIHLRHLYIEHCHRLEGKGSSSEEKFMSLSHLERLHIQHCYNLLEIPMLPASL QDLRLESCRRLVALPSNLGNLAMLRHLYLMNCYVLKDLPDGMDGLVSLKILEIQACAE IEEFPQGLLQRLPTLKELSIQGCPGLETRCREGGEYFDLVSSVQRICIPAAAKTEMEE ESRSGI</aaseq>

Gene Sequence

<dnaseqindica>1..3633#atggcggaatcgctaatcctccccatggtgcgcggggtggcggcgaaggccgccgatgcactcgtacagagagtcaccggcgcgtgcggcgccgtcgacgacgaccgccgcaagctgcaacgccagctgctggccgtccagcgcgcgctggccgacgccgaggcgaagagcgagaccaacctcgccgtcaggcgctggatgaaggacctcaacgccgccgcctacgaggccgacgacgtcctcgacgacttccgctacgaggcgctgcgccgcgacggcgacgccaccgccggcaaggtactcggctacttcaccccgcacaacccactcctgttccgcgtaaccatgagcaagaagctgagcaatgtcctcgagaagatgaacaagctggttgacaagatgaacgagcttggcttgtcagtggatcgcacagaatcaccacaagaactgaaacctccttatctccagatgcattctgctgcactggatgaatcaagtgacattgttggcagagacgacgacaaggaggtggtggttaagctgttgctggatcagcgatatgagcagagattgcaggttctccctgtcatcgggatcgggggttcaggcaagacgacgctcgccaagatggtgtacaacgacacgagggtacgtgaccatttccagctgaagatgtggcactgtgtttcagagaattttgaagctgttccccttctgaaatccatcgttgaattggctacaaatcgaagatgtcaagtgcctgacaaggacaccatcgagctcttgcgacggcagcttgagggagccattggtagcagaaggtttctgttagttcttgacgatgtatggaacgaggatgagaacaagtggaaggatgaactaaggccactcttgtgctctgctgctggtggtcatggaagtgttgtagtggtcacaactcggagccaacaagtagcatctatcatgggcaccatgagatcccatgaactagcatgtctgaatgatgatgattcatgggaattgttctcaaagaaagcattcagtgaagaagtacgagagacagcagaattggtcaccattggaagacttattgtcaagaaatgcaaggggcttcctcttgctctcaatgctatgggtggcctgatgagctcaaagcaacaactccatgaatggaaagccatcgcagacagtgccagagacaaagatgaaatactttccatgcttaaattaagctacagacacttaccatccgaaatgaagcaatgttttgccttctgttccatattcccaaggaaccatgagatggacaaggaagtcttgatccaactgtggatggcaaatggtttcatccaagaagatggaataatggatttggaacaaaaaggagaatacaccttccaatatttggtttggagatccttcctccaagatgtcaaagcaaagaaaactctggaccatttggcagagctccagccgtcgaccattctacaaaaggaaattatggacaaggcattaccatatgagtccattggttgcaaaatgcacgatttgatgcatgacctagcaaaagacgtggcagacgaatgtgtaacttcagaacatgtacttcagcacgatgcatctgtcagaaatgtccgtcacatgaatatatctagcacttttggtatgcaagaaactatggaaatgttacaagtaacatcatctctccgtacttggatagtgccatcacccttgtgcagggatctcaaggatttaagcctggcatcattaagaacccttgtaattgaaaagggaatcttccattaccattcggttatgtctaaccatgtgatcacttattcgaagcatctacgatatcttgacctatctatgtctcaaattgttatgttgccaagttcaatatgtgtgatgtataacttacaaacattgagactcaatggttgcagctttctaaaatatttaccggaaagtatgggaaaaatgaggaagctcctccatctttatcttctgggatgtgatagtttggtgcggatgccaccaaactttggtcttttgaacaatcttcgcactctaacaacatttgttttggacactaaagctggttgtggaattgacgagctcaagaacttgcgtcacattgccaacaggttggaactgtacaatttgagaaaaattaattgcaggaacaatggaatagaagccaatctccatcagaaggaaaatctaagtgaactactattgcactggggtcgtgataaaatttacacaccggaaaacagtgcctacaatgaggaagaagtgttggagtcacttacacctcatggtaagctcaaaattttagagctgcatggatatagtggcctgaagatcccacaatggatgagagacccacagatgttgcagtgcctaacaactctccgcatttccaactgtttaggatgcaaggatctatcaacactgtggttatcggtctcgcttgagcatctgcagttatcccgtatggataatctaaccacattgtgtaagaacgttggtgtgggagctgaaggatacaccatccctcagcaagttttcccaaagttaaagtctctgaaactagagttgttatttagcttggagaaatgggcagaaaatactgcaggtgaggctaagaatttggttacatttccagagctcgaaatgctacagatcattcgctgtagtaaacttgcaagtgtcccagactgtccggttctaaaagaactggacagatttggatcttatatgcttgcaatgaacgaactcacacatctgacatcattgtccaagctcaattacgttgcaaacagtctttgtgattgtgtgagcatgcctttgggctcatggccatctctcgtagaactagttcttagatcttcaacacacattccaaccactctgcaggtggaggcaaatcaaggccagctagaataccttcggagtttgagtctagtaaactgcttcacggctgcatccggctcatccgaaatgcgtcttgggctctggaaatgctttgcctttgtggaggtattgcatattcatatgtgcctcagtcttgtgtgctggccaactgaggagttgacgagcttgattcaccttcgacacctatatattgagcactgtcatagacttgagggaaaaggttcatcatccgaggaaaaattcatgtcactgtcccatctagagaggttacacatacaacactgctacaatctactggagatcccaatgctgcctgcatccctgcaggatctgcggttagaatcttgccgaagattggtggcattgccttcgaaccttggaaatctggccatgttaaggcatctttatttgatgaactgctatgtcctgaaagatcttcctgatgggatggatggcctcgtttcccttaaaattttggagattcaggcatgtgcagagatagaggaattcccacagggtctcctccagcgacttccaacactgaaagaactgtccatacaagggtgccctggattggaaacacggtgcagagaaggtggtgagtattttgatcttgtctcttccgttcaacgtatatgcattccagcagcagcgaaaacagaaatggaggaggaatcaaggtctggaatctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0543050, RefSeq:Os08g0543050