Os08g0543400

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Revision as of 13:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0543400| Description = Transferase family protein| Version = NM_001068935.1 GI:115477608 GeneID:4346205| Length = 2638 bp| Definition = Or...")
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Gene Name

Os08g0543400

Description

Transferase family protein

Version

NM_001068935.1 GI:115477608 GeneID:4346205

Length

2638 bp

Definition

Oryza sativa Japonica Group Os08g0543400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27290279..27292916

Sequence Coding Region

27291308..27291766,27291878..27292747

Expression

GEO Profiles:Os08g0543400

Genome Context

<gbrowseImage1> name=NC_008401:27290279..27292916 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27290279..27292916 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcatgttttgtaacgccccacgaggacacgccagagacgatagaagaagaggtgaaagagatggagtcttgttttgtaacgccccacgaggacacgccaaggcaagggctctggctctctcccctcgacatagtcatggtcagcagaggccatacccctactgtgtacttctaccaacgtgacactgccactgttgctgccgattttttcgaggtaggcaggcttaaggaggctatggcaaaggccctagtggccttctaccccttggcaggccgtctcagtgtagatggtgatggtaggcctgaaattgactgcaatgccgagggtgcgctctttgttgtggctcagtcaaaactcaccgttgatgccttcagcgaccttaagccatcaccagagttgaggaggttgtttgccccccgtattgagccagcatccatcatgcttggagtacaggtgactttcttgagttgtggtggtgtggcattagggacggtgttgcaccatgtcgccatcgatgcccttagcgcgttccatttcttccagacatggtcttctttctgccgagatggtgaagccgccatgttggagctgccctgccatgaacgcaccctcctccgcacacgctccccacctatcgtccacccggatgtgcactcaatgttcagtctaaagctcaacttctgtgagccatcagaccctatatccaccaagatattcgtcatctccaagaaccagctcgatgcccttaaacaaatatgtggtggattgagcacattttgtgccatgagcgcccttgtatggcagtgcatgtgcattgctcggcaactccctctagacgccgagacacgcgtcatcttcccagtcaacattcggcgccgtgtgaagccacctctcccagatcgctacttcggcaatgcacttgtcgacttgaaagtagcctccacagttagggacattgtcttggggacactggatgtaactgctgcccagataaagaacgcattgggacgccttgacgatgagatgctgcagtcggcgatagactacaatgagatggcagggatgcccaacaagcataccaagggaaacctgccagatacagaattacgaatggtctcttggctaggcatgccagtttatgatgcggattttgggtgggggaagccggagatgatgtctcgtgcggagtctgtgcgtggcggatttgtttatatgatggatggcattgacaacgatgggggtggcgtgcgtgtgctcatgtgtatggaggcacgaaagatggaggagttcgagcgactgttttatgccaagtttgcacaatga</cdnaseq>

Protein Sequence

<aaseq>MESCFVTPHEDTPETIEEEVKEMESCFVTPHEDTPRQGLWLSPL DIVMVSRGHTPTVYFYQRDTATVAADFFEVGRLKEAMAKALVAFYPLAGRLSVDGDGR PEIDCNAEGALFVVAQSKLTVDAFSDLKPSPELRRLFAPRIEPASIMLGVQVTFLSCG GVALGTVLHHVAIDALSAFHFFQTWSSFCRDGEAAMLELPCHERTLLRTRSPPIVHPD VHSMFSLKLNFCEPSDPISTKIFVISKNQLDALKQICGGLSTFCAMSALVWQCMCIAR QLPLDAETRVIFPVNIRRRVKPPLPDRYFGNALVDLKVASTVRDIVLGTLDVTAAQIK NALGRLDDEMLQSAIDYNEMAGMPNKHTKGNLPDTELRMVSWLGMPVYDADFGWGKPE MMSRAESVRGGFVYMMDGIDNDGGGVRVLMCMEARKMEEFERLFYAKFAQ</aaseq>

Gene Sequence

<dnaseqindica>1030..1488#1600..2469#ctgctctccacccacacagccgcccgccagcatctgcatctgcatctccctctgcgccagcgacggccggcgcgccccatcgccgcctccgccgtcgacttgccccatcaccgccaacgaggcgttctgccgcctggcgccgctcgtcacgtacgaggacatcctccgcatcgccaacggcgacacctcaccatcctatccggcaagcctgtcagcgagttcctcaccaggtaagtgctcgatctactccctgcatgcgtacatggtcgaccacttcgggagggaagaggaatataactatgtactgtgactctgcgagtccatggttgtgtttagttcacgctaaaattaaaagtttggttgaaattgaaacgatgtgacagaaaagttataagtttatgtgtgtagaaaagtttttatgtgatggaaaagttaaaagtttgaagaaaaagttgggaactaaacaagggtatgactgctatgtgctaatgagtaatgacctgatgtgtgtgactatgtcagtgtgtgatactgtgatgtgtgtgagtcagtgagtgactatgttagtgtgtgcaagtttgtgctaatgacctaatgttaatctgtgtgactatgtcagccgtcagcgtgtgcaagtttgtggatgtttgtcgatatggtattattaatcgctaaaacttgaaaatgttgacattttctattagaaaaaataatgaagttatatttcttcgttgatttgtgatgcttagtttgaggggtttttatgttccgattaatatttgtcaccgcattcgtttcgtttcgtattcgctccgtatctgtattcgataatattcaatcctgttttcatatccggttctgattccaattttgaaaaaataatatgaaaacaaatatgatagagctagtttctgaccgtattcgatccgctttcatccctaatcccagcagtttagtatgcattgcagccaatattttctcatggacaaggcgctgaagtgagagacgacagacgaagaggtgaaaaaaatggagtcatgttttgtaacgccccacgaggacacgccagagacgatagaagaagaggtgaaagagatggagtcttgttttgtaacgccccacgaggacacgccaaggcaagggctctggctctctcccctcgacatagtcatggtcagcagaggccatacccctactgtgtacttctaccaacgtgacactgccactgttgctgccgattttttcgaggtaggcaggcttaaggaggctatggcaaaggccctagtggccttctaccccttggcaggccgtctcagtgtagatggtgatggtaggcctgaaattgactgcaatgccgagggtgcgctctttgttgtggctcagtcaaaactcaccgttgatgccttcagcgaccttaagccatcaccagagttgaggaggttgtttgccccccgtattgagccagcatccatcatgcttggagtacaggtcagtatatatctagtttgtgtgtgtatgtgtgtatattcaattgtatagagctagctttggactagtgtggtgatatgtacctaggtgcacattaattattccttgcaggtgactttcttgagttgtggtggtgtggcattagggacggtgttgcaccatgtcgccatcgatgcccttagcgcgttccatttcttccagacatggtcttctttctgccgagatggtgaagccgccatgttggagctgccctgccatgaacgcaccctcctccgcacacgctccccacctatcgtccacccggatgtgcactcaatgttcagtctaaagctcaacttctgtgagccatcagaccctatatccaccaagatattcgtcatctccaagaaccagctcgatgcccttaaacaaatatgtggtggattgagcacattttgtgccatgagcgcccttgtatggcagtgcatgtgcattgctcggcaactccctctagacgccgagacacgcgtcatcttcccagtcaacattcggcgccgtgtgaagccacctctcccagatcgctacttcggcaatgcacttgtcgacttgaaagtagcctccacagttagggacattgtcttggggacactggatgtaactgctgcccagataaagaacgcattgggacgccttgacgatgagatgctgcagtcggcgatagactacaatgagatggcagggatgcccaacaagcataccaagggaaacctgccagatacagaattacgaatggtctcttggctaggcatgccagtttatgatgcggattttgggtgggggaagccggagatgatgtctcgtgcggagtctgtgcgtggcggatttgtttatatgatggatggcattgacaacgatgggggtggcgtgcgtgtgctcatgtgtatggaggcacgaaagatggaggagttcgagcgactgttttatgccaagtttgcacaatgaagaaactacctagctagaacatgatgcatgttttctgttctattatcaataatggatgtttcatgtaataatataaccaaatacctccatatattttggtggcatggttgtttcagacatgacagggtgtggttgatttacgcggacaccacaaaaatgtggttgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0543400, RefSeq:Os08g0543400