Os08g0544300

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Gene Name

Os08g0544300

Description

Reverse transcriptase, RNA-dependent DNA polymerase family protein

Version

NM_001188749.1 GI:297726628 GeneID:9267548

Length

2841 bp

Definition

Oryza sativa Japonica Group Os08g0544300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27345180..27348020

Sequence Coding Region

27345354..27347819

Expression

GEO Profiles:Os08g0544300

Genome Context

<gbrowseImage1> name=NC_008401:27345180..27348020 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27345180..27348020 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaattaaattttgggacgaagctgttcttgctgcggcataccttattaaccgcactcctagcaaggttatcaactttgcatgtcctttagaacaattgttcaaggaaaaaccaaactatacagcattgagaatattcgggtgtgctgtttggcccaaccttcggccttacaataaacacaaattagctttccgttccaagagatgtgtttttctaggctatagtaacctacataaagggttcaagtgtctagaaattgccacaggcagagtctatgtctccagggatgtaacctttgatgaaagcatttttcctttctccgaactccactcaaatgccggcgcatgccttagagcggaaatatctctccttccaccatccttggttccgcatctttcttcattagggggagaacagaataaccatgtgcttaattatccgcctaatgttactgatcagtttggtgaagaaaatgcagaaatcggtgaagaaattgtagcaaacggtgaagaaaatgcagcagcagcagcagatgaaaatgcagcagcagcagcaaatggtggtgcacaggacgacgtgcatggtgtggcatatgatgcgtcgccggagcactcttcgcctgtgacagatgatgcgacggcgtcggcagctgagcagcatggcaatccaatccaggaggagcacctggtgcaggcgtccccacaaacagcgtcgtccacatcgccatctgttgcatcatcggctggcgtgcatgatgatgtgactactgatcagtctgatcaaactgatcaggccatgccagaagcagctgttgcaccgatcagaccaaaaacacgtctccaaagcgggatcaggaaagaaaaggtatatactgatggaactgttaaatggctaaattttacttcttctggtgaaccacagagtctggaagaagcagtgaataataaacactggaaggaggccatggatgctgaatacatggcactgatagaaaacaagacatggcatttggttcctcctcagaaaggaagaaatgtcatagattgtaaatgggtgtataaggtcaaaaggaaagcagatggcagtctagacaggtataaagcacggttggttgcaaaaggattcaagcaaaggtatggcattgattatgaggatacttttagtccggttgttaaagctgctactatcagaatagttttatctcttgctgtctctagaggttggagtcttagacaattggatgttaaaaatgccttcctacatggagtcctagaagaagaggtctatatggagcaaccaccagggtatgaaaagaagtctatgcctaactatgtctgtaaattagataaagctctttatggacttaaacaggcgcctcgagcttggtactccaggttaagtactaagttaagtgagttaggctttgtaccttcaaaggcagacacatcactgttcttctataagaaaggacaggtttctatatttcttctgatatatgttgatgatattattatggccagttctgtaccagatgcaacttcaacacttctgcaggaactaagcaaggactttgctcttaaggaccttggtgatctgcattacttcttgggaatcgaggtccataaagtgaaggatggtctcatgcttagtcaagagaagtatgcatcggatcttctacgacgggttggtatgtatgagtgtaaaccggtcagtactcctctgtcaacctcagaaaaattatcagtaaatgagggaacattgcttggacctcaggattctactcagtataggagtgtagttggtgctttacagtatttaactttgacaagaccagatatttctttttcgataaataaggtgtgtcagttcttacatgctccaactacaactcattgggcagctgtaaaaaggatcttaagatatgttaaatatacagttgatacaggtcttaagttctgtaggaatccctctctgcttgttagtggtttttcagatgcagattgggcaggatctccagatgacagaagatcaacaggaggttttgcagtgtttttaggcccaaatcttgtatcatggagtgctagaaaacaagctacagtatcaaggtctagtactgaagctgagtataaagctctggctaatgcaacagcagaaattatgtgggtacagactttgttgcaagaactgggagtagaatcgcctcgagcagccaagctatggtgtgataatcttggagctaagtatctttctgctaatccaatctttcatgctcgtacaaagcatatagaagttgactttcattttgtgagagaaagggtagctagaaagttgcttgaaattgcatatatatctactaaagatcaggttgcagatggttttacaaaagctataccagtaagacaaatggagatgttcaagaacaatcttaacttagaaagagttaggattgaggaggagtgttag</cdnaseq>

Protein Sequence

<aaseq>MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEKPNYTAL RIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDE SIFPFSELHSNAGACLRAEISLLPPSLVPHLSSLGGEQNNHVLNYPPNVTDQFGEENA EIGEEIVANGEENAAAAADENAAAAANGGAQDDVHGVAYDASPEHSSPVTDDATASAA EQHGNPIQEEHLVQASPQTASSTSPSVASSAGVHDDVTTDQSDQTDQAMPEAAVAPIR PKTRLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENK TWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV KAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLD KALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMAS SVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMY ECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQF LHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGF AVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKL WCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI PVRQMEMFKNNLNLERVRIEEEC</aaseq>

Gene Sequence

<dnaseqindica>175..2640#cttgctgttcaaacagattgggggggagagtatcaaaaactcaacaccttctttgctaagataggtatctctcatcatgtttcctgtccttatgctcaacaacagaacggttcagctgaacgaaaacatagacatctcattgaggttgcactcacattactagcacatgcatctatgccaattaaattttgggacgaagctgttcttgctgcggcataccttattaaccgcactcctagcaaggttatcaactttgcatgtcctttagaacaattgttcaaggaaaaaccaaactatacagcattgagaatattcgggtgtgctgtttggcccaaccttcggccttacaataaacacaaattagctttccgttccaagagatgtgtttttctaggctatagtaacctacataaagggttcaagtgtctagaaattgccacaggcagagtctatgtctccagggatgtaacctttgatgaaagcatttttcctttctccgaactccactcaaatgccggcgcatgccttagagcggaaatatctctccttccaccatccttggttccgcatctttcttcattagggggagaacagaataaccatgtgcttaattatccgcctaatgttactgatcagtttggtgaagaaaatgcagaaatcggtgaagaaattgtagcaaacggtgaagaaaatgcagcagcagcagcagatgaaaatgcagcagcagcagcaaatggtggtgcacaggacgacgtgcatggtgtggcatatgatgcgtcgccggagcactcttcgcctgtgacagatgatgcgacggcgtcggcagctgagcagcatggcaatccaatccaggaggagcacctggtgcaggcgtccccacaaacagcgtcgtccacatcgccatctgttgcatcatcggctggcgtgcatgatgatgtgactactgatcagtctgatcaaactgatcaggccatgccagaagcagctgttgcaccgatcagaccaaaaacacgtctccaaagcgggatcaggaaagaaaaggtatatactgatggaactgttaaatggctaaattttacttcttctggtgaaccacagagtctggaagaagcagtgaataataaacactggaaggaggccatggatgctgaatacatggcactgatagaaaacaagacatggcatttggttcctcctcagaaaggaagaaatgtcatagattgtaaatgggtgtataaggtcaaaaggaaagcagatggcagtctagacaggtataaagcacggttggttgcaaaaggattcaagcaaaggtatggcattgattatgaggatacttttagtccggttgttaaagctgctactatcagaatagttttatctcttgctgtctctagaggttggagtcttagacaattggatgttaaaaatgccttcctacatggagtcctagaagaagaggtctatatggagcaaccaccagggtatgaaaagaagtctatgcctaactatgtctgtaaattagataaagctctttatggacttaaacaggcgcctcgagcttggtactccaggttaagtactaagttaagtgagttaggctttgtaccttcaaaggcagacacatcactgttcttctataagaaaggacaggtttctatatttcttctgatatatgttgatgatattattatggccagttctgtaccagatgcaacttcaacacttctgcaggaactaagcaaggactttgctcttaaggaccttggtgatctgcattacttcttgggaatcgaggtccataaagtgaaggatggtctcatgcttagtcaagagaagtatgcatcggatcttctacgacgggttggtatgtatgagtgtaaaccggtcagtactcctctgtcaacctcagaaaaattatcagtaaatgagggaacattgcttggacctcaggattctactcagtataggagtgtagttggtgctttacagtatttaactttgacaagaccagatatttctttttcgataaataaggtgtgtcagttcttacatgctccaactacaactcattgggcagctgtaaaaaggatcttaagatatgttaaatatacagttgatacaggtcttaagttctgtaggaatccctctctgcttgttagtggtttttcagatgcagattgggcaggatctccagatgacagaagatcaacaggaggttttgcagtgtttttaggcccaaatcttgtatcatggagtgctagaaaacaagctacagtatcaaggtctagtactgaagctgagtataaagctctggctaatgcaacagcagaaattatgtgggtacagactttgttgcaagaactgggagtagaatcgcctcgagcagccaagctatggtgtgataatcttggagctaagtatctttctgctaatccaatctttcatgctcgtacaaagcatatagaagttgactttcattttgtgagagaaagggtagctagaaagttgcttgaaattgcatatatatctactaaagatcaggttgcagatggttttacaaaagctataccagtaagacaaatggagatgttcaagaacaatcttaacttagaaagagttaggattgaggaggagtgttagatcttatcatatcttatcattctctgtatggatatgcacggatgcatgttggttcggatagatagaggataggactctaatcccttgtaattaggatcaccgaaccaacacatctgcatgcatatatatctgtaaactcagcgcgtttttgtgtattgtgaatcaacacgaaaccctgcgtccaccgtgacgctttcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0544300, RefSeq:Os08g0544300

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