Os08g0544400

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Revision as of 13:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0544400| Description = The start codon is not identified.| Version = NM_001068940.1 GI:115477618 GeneID:4346210| Length = 2612 bp| Definit...")
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Gene Name

Os08g0544400

Description

The start codon is not identified.

Version

NM_001068940.1 GI:115477618 GeneID:4346210

Length

2612 bp

Definition

Oryza sativa Japonica Group Os08g0544400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27362893..27365504

Sequence Coding Region

27362893..27363177,27363523..27363606,27363677..27363810,27363912..27364139,27364240..27364411
,27364510..27364764,27365025..27365294

Expression

GEO Profiles:Os08g0544400

Genome Context

<gbrowseImage1> name=NC_008401:27362893..27365504 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27362893..27365504 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atagatgaagtcatggacctagttgagttaactggactgaagaatgccatggttggcctagcaggagcgacaggcctgtctgctgagcagcgaaaaagactaacaatagctgttgagttggtagctagtccttccattatatttatggatgagccaaccactggtttggatgctcgtgctgcagcaattgtcatgagaacagtaagaaagacagtagacactggacgaactgttgtctgcacaattcatcagccaagcatcgagatatttgaatcttttgacgagcttctacttatgaagagaggaggtcagctcatatacagtggttcattaggtcccctatctagcaatatgataaagtatttcgaggctatacctggtgttcctagaataaaagaggggcaaaacccagcagcgtggatgttagatatcagttcgcgcacagcagaatatgagattggagtggactatgcagaaatttatcagcgctcatccctatactgggagaacaggcaactaattgatgacctaggaaaaccagaaccaaacacagaggatctacattttccacccaaatattggcaagactttagggcacaatgcatggcatgcctgtggaagcaaaattgtgcttattggaaaaattcagaacacaacgttgtccgattcataaacacatttgctgtgtcaattatgtttggaattgtattctggaaaattggctcaaccattaaggatgagcaagatgtattcaacatactaggggttgtgtatgggtcagcactatttctgggtttcatgaactgcagcatcttacaaccagttgtaggaatggaaagagttgtcctctacagagagaaggcggcaggcatgtactccactatggcgtacgccattgctcaggtggcagttgaattgccttacatgtttgtccaagtattcatcttctcagcgattgtgtacccaatgattgggttccaaatgactgccacaaagttcttttggtttgccctctacatggtgttaagtttcctgtactacacgctctatgggatgatgacagtagcactaacacctaacattgagatagcagctgggttgtccttcctcatcttcatcttttggaatgtcttctctggattcatcattggaagacagatgatcccggtgtggtggagatgggtgtattgggcaaacccggcggcatggacggtgtacgggctcatgttctcgcagctgggagaccggacggagctgatccaggtgccagggcagccagagcagacggtgaaggagttcctggagggctacctcggactccaggaccgctacttcaacctcgtcaccagcctgcacgtcgccatcatcgcgctcttcaccttcctcttcttcctctccatcaagcacctcaagttccagaggcggtag</cdnaseq>

Protein Sequence

<aaseq>IDEVMDLVELTGLKNAMVGLAGATGLSAEQRKRLTIAVELVASP SIIFMDEPTTGLDARAAAIVMRTVRKTVDTGRTVVCTIHQPSIEIFESFDELLLMKRG GQLIYSGSLGPLSSNMIKYFEAIPGVPRIKEGQNPAAWMLDISSRTAEYEIGVDYAEI YQRSSLYWENRQLIDDLGKPEPNTEDLHFPPKYWQDFRAQCMACLWKQNCAYWKNSEH NVVRFINTFAVSIMFGIVFWKIGSTIKDEQDVFNILGVVYGSALFLGFMNCSILQPVV GMERVVLYREKAAGMYSTMAYAIAQVAVELPYMFVQVFIFSAIVYPMIGFQMTATKFF WFALYMVLSFLYYTLYGMMTVALTPNIEIAAGLSFLIFIFWNVFSGFIIGRQMIPVWW RWVYWANPAAWTVYGLMFSQLGDRTELIQVPGQPEQTVKEFLEGYLGLQDRYFNLVTS LHVAIIALFTFLFFLSIKHLKFQRR</aaseq>

Gene Sequence

<dnaseqindica>1..285#631..714#785..918#1020..1247#1348..1519#1618..1872#2133..2402#atagatgaagtcatggacctagttgagttaactggactgaagaatgccatggttggcctagcaggagcgacaggcctgtctgctgagcagcgaaaaagactaacaatagctgttgagttggtagctagtccttccattatatttatggatgagccaaccactggtttggatgctcgtgctgcagcaattgtcatgagaacagtaagaaagacagtagacactggacgaactgttgtctgcacaattcatcagccaagcatcgagatatttgaatcttttgacgaggtatgagtaagtcaataaatgagtcaaaaatattttccactacaaaatcaagaaagaatagtccagtagtggcaggtgaatgactgaacgataattgaaagcacagcaccaaaagtagtgctttttgtcaaatcaaacagcaaaactaattgacttcacatttatgctcccctttcttcaatagtagcacacattaaaatgttcttttaacacaagcaaccattaaagtgttaaagatagttgtgacaagtagaatatttcaggaaccacagctcaatttacctttcctatgaacaagtacataggtcgtccttctgaatttgagttcaatcttattgatcgcagcttctacttatgaagagaggaggtcagctcatatacagtggttcattaggtcccctatctagcaatatgataaagtatttcgaggtaagattacctaagattgggttcttgttccaaaatggagagaagaggtcttaaaattcttttgtcgcaggctatacctggtgttcctagaataaaagaggggcaaaacccagcagcgtggatgttagatatcagttcgcgcacagcagaatatgagattggagtggactatgcagaaatttatcagcgctcatccctatactggtaacgcaatacgatcataaagcaaaaattactattttgctaacttgtttgaacaagaaggaaaaggataaacatgatgaaatcacacatggtttcttcagggagaacaggcaactaattgatgacctaggaaaaccagaaccaaacacagaggatctacattttccacccaaatattggcaagactttagggcacaatgcatggcatgcctgtggaagcaaaattgtgcttattggaaaaattcagaacacaacgttgtccgattcataaacacatttgctgtgtcaattatgtttggaattgtattctggaaaattggctcaaccatgtaagtacgaatagctatccaaatatttttatttcatgagaacttgtagtgcttcaatattgttttggttaaatgctaactttgttctcctgtgcaacagtaaggatgagcaagatgtattcaacatactaggggttgtgtatgggtcagcactatttctgggtttcatgaactgcagcatcttacaaccagttgtaggaatggaaagagttgtcctctacagagagaaggcggcaggcatgtactccactatggcgtacgccattgctcaggtaattaatatatagatctgtataaaaaaaacaactattctgaaaaatagaggatttgaaatggactctaaacacaaatgctggattcttgtgtgcaggtggcagttgaattgccttacatgtttgtccaagtattcatcttctcagcgattgtgtacccaatgattgggttccaaatgactgccacaaagttcttttggtttgccctctacatggtgttaagtttcctgtactacacgctctatgggatgatgacagtagcactaacacctaacattgagatagcagctgggttgtccttcctcatcttcatcttttggaatgtcttctctggattcatcattggaagacaggtactactaccctgctactctgttgtttcaagtccccaatttttgtcaaaaccttaaatttaggttctactagggaggataaatctaaaattctcagacctcttcctaacaaaattgataaaaagtttacccttgataaccccacaacttcataatcagagatcgtgtcttagatttcgttttgaacatttgtgtgtgcttgcgaagaaaagaaaatttgtatgtttgactaacctgatgaacaacaacaaatgatgcagatgatcccggtgtggtggagatgggtgtattgggcaaacccggcggcatggacggtgtacgggctcatgttctcgcagctgggagaccggacggagctgatccaggtgccagggcagccagagcagacggtgaaggagttcctggagggctacctcggactccaggaccgctacttcaacctcgtcaccagcctgcacgtcgccatcatcgcgctcttcaccttcctcttcttcctctccatcaagcacctcaagttccagaggcggtagcacggaattgatgcgtgcaaactgcaaatatacactaataaccaatcacttaactgtacaaatgtaagagaacataacaaaaatgcacaacataaggatttgttactaaaatatgtaaaccgtaagggatttgcatgtgtaatagcagtatagaattgttgtagtaccatggtcgagaaatatacaaaagaaagcaagtgtatatgttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0544400, RefSeq:Os08g0544400