Os08g0544800

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0544800| Description = PCF2| Version = NM_001068944.1 GI:115477626 GeneID:4346214| Length = 1616 bp| Definition = Oryza sativa Japonica Gr...")
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Gene Name

Os08g0544800

Description

PCF2

Version

NM_001068944.1 GI:115477626 GeneID:4346214

Length

1616 bp

Definition

Oryza sativa Japonica Group Os08g0544800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27384224..27385839

Sequence Coding Region

27384566..27385687

Expression

GEO Profiles:Os08g0544800

Genome Context

<gbrowseImage1> name=NC_008401:27384224..27385839 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27384224..27385839 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgcaggcgcaggacaaggcggaggagggggaggaggagggcacgcggcagcaacacgcgcaggctgggccggtcggtgcggctggtggtggtggtggggggggcgcggcggctgtggcgatgagcgccatccccatgaacagctggctcgtgcccaagcccgaaccggtggagttcttcggcgggatggccatggtgcgcaagccgccgccgaggaaccgggaccggcacaccaaggtggaggggcgcgggaggcggatccgcatgccggcggcgtgcgcggccaggatcttccagctcacgcgggagctagggcacaagtccgacggcgagaccatccggtggttgctgcagcagtcggagccggcaatcatcgcggccaccggaaccggcaccgtcccggcgatcgcgaccaccgtcgatggcgtgctccgcatccccacccagtcgtcgtcgtcctctggcccggcgtcctccgcggtggtcgacggtgaggagtcctcggccaagcgacgccgcaagctgcagcccacgcgcgcggtggctggcgcgtctccgctggccacggcggcgcccgcggcgtactacccggtcatcgctgaccctctcctgcaaggtagcggcggcgcggcgatttcagtcccgagcggcctcgctcccatcaccgccaccggcgctccccaaggcctcgtgcccgtcttcgccgtcccggccactggcagccccgcggtcgccggcggcaaccgcatgatcccgcaagccaccgccgtatggatggtcccgcagcccgcaggcgccgcgggcgcgggcaaccaacccacgcaattctgggccatccaatccgcgccccagctcgtgaacttcgccggcgcgcagttcccgacggcgattaacgtcgccgacttccagcagcagcaacaacagcagccggtgtcaacaaccatcgtccagaacagcaactcgggcgagcacatgcacttctccggcgccgactcccacgagcagcagcggcgcgggcggaaggaaggcaacagcggcggcgtggtggaccacccggaggaggacgaagacgacgacgacgacgagccggtctccgactccagcccggaagagtag</cdnaseq>

Protein Sequence

<aaseq>MEAQAQDKAEEGEEEGTRQQHAQAGPVGAAGGGGGGGAAAVAMS AIPMNSWLVPKPEPVEFFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQL TRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSSSGPAS SAVVDGEESSAKRRRKLQPTRAVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPS GLAPITATGAPQGLVPVFAVPATGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPT QFWAIQSAPQLVNFAGAQFPTAINVADFQQQQQQQPVSTTIVQNSNSGEHMHFSGADS HEQQRRGRKEGNSGGVVDHPEEDEDDDDDEPVSDSSPEE</aaseq>

Gene Sequence

<dnaseqindica>153..1274#agcgaagcgaagcgagtgaacacacacctctccccccaccctttcccgcaacacgcgaaaagagaggcgaggcggaaacaagcccgggcttttccgtctcgtctcgtctccctcccaaaccgaaccaatccaatctcttctcatccatccccatggaggcgcaggcgcaggacaaggcggaggagggggaggaggagggcacgcggcagcaacacgcgcaggctgggccggtcggtgcggctggtggtggtggtggggggggcgcggcggctgtggcgatgagcgccatccccatgaacagctggctcgtgcccaagcccgaaccggtggagttcttcggcgggatggccatggtgcgcaagccgccgccgaggaaccgggaccggcacaccaaggtggaggggcgcgggaggcggatccgcatgccggcggcgtgcgcggccaggatcttccagctcacgcgggagctagggcacaagtccgacggcgagaccatccggtggttgctgcagcagtcggagccggcaatcatcgcggccaccggaaccggcaccgtcccggcgatcgcgaccaccgtcgatggcgtgctccgcatccccacccagtcgtcgtcgtcctctggcccggcgtcctccgcggtggtcgacggtgaggagtcctcggccaagcgacgccgcaagctgcagcccacgcgcgcggtggctggcgcgtctccgctggccacggcggcgcccgcggcgtactacccggtcatcgctgaccctctcctgcaaggtagcggcggcgcggcgatttcagtcccgagcggcctcgctcccatcaccgccaccggcgctccccaaggcctcgtgcccgtcttcgccgtcccggccactggcagccccgcggtcgccggcggcaaccgcatgatcccgcaagccaccgccgtatggatggtcccgcagcccgcaggcgccgcgggcgcgggcaaccaacccacgcaattctgggccatccaatccgcgccccagctcgtgaacttcgccggcgcgcagttcccgacggcgattaacgtcgccgacttccagcagcagcaacaacagcagccggtgtcaacaaccatcgtccagaacagcaactcgggcgagcacatgcacttctccggcgccgactcccacgagcagcagcggcgcgggcggaaggaaggcaacagcggcggcgtggtggaccacccggaggaggacgaagacgacgacgacgacgagccggtctccgactccagcccggaagagtagcaaacacacacagcacaacacaaaaaaagcaagcgaggcgagcactccactgcacgccaaaaagtccacaagtcccccccacacacaaagcttaggttcctttttgctccgattcaatttctcgatcgtttctttcccgcaatattcctcatccttgtcatgatgaactagtaattactcccgcgtgttgtgctgtgctgtgctggtactactccttactttcccgtccttagctcagtgtttagtcttagagaagaagaagatgatgatgatttagcatgcaaatgagcagttgacaatttgacataagattaagtctaatccagtactacttgctgtgac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0544800, RefSeq:Os08g0544800