BGIOSGA003265

From RiceWiki
Revision as of 18:22, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003265

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003265, complete gene.

LocusTag

B1085F09.3

Ensembl Transcript ID

BGIOSGA003265-TA

Ensembl Protein ID

BGIOSGA003265-PA

Length

4654

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10878153..10882806

Sequence Coding Region

10878153..10878338,10879067..10879141,10879222..10879281,10881270..10881347,10881429..10881480
,10881629..10881900,10882253..10882498,10882660..10882806

Genome Context

<gbrowseImage1> name=IndicaChromosome01:10878153..10882806 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:10878153..10882806 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCTTTGCTGCAGAGTTTGATATGTTGGCATTTAATAATCCAATTGAGCTACTGAGCAATGCATATGTGCTGTGCATGGGACCTACACATAGGTCTATCAAATTAGGGACTCCCAGAAAACAATATAAACAGTTGGGTTTCCCCATTAAGAAAGCTGGCAAAGTTTGCCTATGGCACGTTTTTCTTGAACCAGGTCAGCTTGCTCTTGCTGCTGCTTCTGACTCTGACAGATCCAAGGACAAACATGAAGATCAAAAGACATTGCGTCGGCTCGCCCAAAATCGCGAGGCTGCAAGGAAGAGTCGTTTGAGGAAAAAGGCATATGTTCAACAATTGGAGAATAGCAGGCTAAAGCTTACACAACTAGAACAAGAATTGCAACGAGCTCGTCAGCAGGGCATTTTTATATCCAGCTCAGTGGACCAGACTCATTCCATGAGTGGAAATGGGGCATTGGCTTTTGATATGGAGTATGCACGTTGGTTGGAAGAACACAATAGGCAAATTAATGAGCTAAGGTCTGCAGTCAATGCTCATGCAGGTGATAATGAGCTCCGTGGTGTTGTTGACAAGATCATGTCACACTATGAGGAGATTTTCAAGCAGAAAGGAAATGCGGCCAAAGCAGATGTCTTTCATGTGTTATCAGGCATGTGGAAGACACCAGCTGAGAGGTGTTTCTTGTGGCTAGGAGGATTCCGACCATCCGAGCTTTTAAAGCTTCTTTCGACACAGCTTGAACCTCTCACTGAGCAGCAGCTGTCAGGGATAGCCAACCTTCAGCAGTCTTCACAACAAGCTGAAGATGCTCTTTCACAAGGAATGGAGGCCCTTCAGCAGTCCTTGGCAGAAACATTGGCTGGGTCTCTTGGTTCTTCTGGATCAACGGGAAACGTGGCAAACTACATGGGCCAAATGGCAATGGCCATGGGGAAGCTTGGGACCCTTGAGAATTTCCTTCGCCAGGCTGACAACCTGCGGCAGCAGACTCTTCAACAGATGCAAAGGATACTGACCACTAGGCAGTCTGCCCGTGCGCTTCTTGTGATAAGCGATTACTCTTCGCGGCTTCGTGCCCTTAGTTCCCTCTGGCTTGCTCGGCCGAAAGAATAG</cdnaseq>

Protein Sequence

<aaseq>MPFAAEFDMLAFNNPIELLSNAYVLCMGPTHRSIKLGTPRKQYKQLGFPIKKAGKVCLWHVFLEPGQLALAAASDSDRSKDKHEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSVDQTHSMSGNGALAFDMEYARWLEEHNRQINELRSAVNAHAGDNELRGVVDKIMSHYEEIFKQKGNAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGIANLQQSSQQAEDALSQGMEALQQSLAETLAGSLGSSGSTGNVANYMGQMAMAMGKLGTLENFLRQADNLRQQTLQQMQRILTTRQSARALLVISDYSSRLRALSSLWLARPKE</aaseq>

Gene Sequence

<dnaseqindica>1..186#915..989#1070..1129#3118..3195#3277..3328#3477..3748#4101..4346#4508..4654#ATGCCCTTTGCTGCAGAGTTTGATATGTTGGCATTTAATAATCCAATTGAGCTACTGAGCAATGCATATGTGCTGTGCATGGGACCTACACATAGGTCTATCAAATTAGGGACTCCCAGAAAACAATATAAACAGTTGGGTTTCCCCATTAAGAAAGCTGGCAAAGTTTGCCTATGGCACGTTTTTGTGAGATTTGTGGAATTCGTTCATGCGATTTGGATCCTTATGCACCTTGAATTCGCTTGAGTTCCTTGAATACATTTTGTTTGATATTTTATCCCTTCCAATAGCTTGTGTAATTTAACTTTTGGTATATAGCATGATCAAAAGATATAGACACGTTTATTGAAAAATATGAAATGCAAATCGTAACAGGCCTATTTATAAGTTGCGTAATATGATAAAGATGTGGGCTTTTTTGCATTGAGAAATTTGTTATGGCAGAAAGTAATTTAATAGATACTAAGGCTGTGTTCTTTCCCTTAGGTGTTACGGAGATTTTCAGTGCATGCAAAACGAGAAACCATTATAAACTTGAAAAATAACAATTTATATATAGATTTTTTTTTTGCAAAAAAAGGCACCATCTAACAGTTTGAAAAGTGTTCTAATGGAAAATGAGGAAGCTAAAGTTTGGAGTTGTGCAAAAGAACGTGGCCTAAGTAATAGGATGCATAAACAAAAATTACATGCTAATGCCTGTTGGTTTACAAAATTAAAGCTAAGTGATCAAATTCATTTTTTTGAATATGTTTTAGTCCACAGACATTTCAAAACAAACTGATCTTTCTTTTTCATAAAAGTTGGAGTCTTATTCATTTTTTTATGTAAAACATCAGGAATCAAGAAGGTAAAATTCATTATTATATAAAATAGGAATATCGGGAGCTTGATAGTTATGTTGTCACCTGCAGCTTGAACCAGGTCAGCTTGCTCTTGCTGCTGCTTCTGACTCTGACAGATCCAAGGACAAACATGAAGATCAAAAGGTAAAATTTTGCAAGTAGCTCTCTCCTTTTTGTTTCATATTATCGTTGTTGCAACAAATATTTTCCTTATCACTTTGTAGACATTGCGTCGGCTCGCCCAAAATCGCGAGGCTGCAAGGAAGAGTCGTTTGAGGAAAAAGGTACTTGTGTTCTGCTGTAGCTTTTATACTAAAGAAGTTTATTCCTTTTCAAGTTTTGAAAATTGATGATTTATACCATGTTCTATTTTTTTCATTCTGTTACTAGGCATTATTAAACTGTATTCTTGTATTAGGATTCCACTATCATTTCTACTAGAAGATAGCATGCGTTGCATTGGGAACTTCTATATCACTTGCAGATTCATGGAAAATGGAAAAGTTTTGCCAAAATTCTATGGGGAATCACTTGCAAAAATCGGCTGGGTATGGGGGTAAATAGTTCAGACAGACATGTGCACACCTCAAAAATCAGAAAATTTGTTTGTTGGGCAACATGAGAAACGATATTCCCATCATAATATATAAGGCTGCACTAGATGTGTACATGTCTAGGATAATGAAATAATCAAGTTAGTAATAGTAATGAATTTTATTGAAAGGTAGAAGATACCTGGTTTTAACTTATCATCCATGCAATGGAGTCTAGTGGCTACTCATTATTTAAACACTTGCACAATTTGAGGGATGATTATTAAAACAAGTAGTACATTTACAGTCTTACACACTATATCAGGGTAAACCGTCAGTTGAGTTGGTCAGCTGGCTTCATCAATTTTTGGAAAAGTATGCTTGTTGCTCCAGCGGCTGAGCTAGCAAAATAATTTATTACCTGCAATTAGAAACACAAACGAGAATAAGGATGCCACAGATGTTCTCTTGCCTGTTCTGTAAGCTGATTCAGATTGATTGAGCTGACACCGGCCATGATTCTTATACTCAAATCTGTGGAACAATCCACACAACACAAATATACACGGTTCAATTTAATTAAGGCATGTAGCTTGGCAGTGAAAGGCCACGATGGTGATGGGTGATCATAGGCATCTACCATCAGGTTGGACCACCAGAGATGATCTCTCTGCTGATGACGTGTACTAATCTACAATCTATGAGAACTAAACATGTTTAAGAGGATGAAGTAACATATTTAAGGCATTATATGCGTGATTGCCTGTCCTTGCTGGAGAGATTGGATGCTGGTCGGGACATGGCAGAGAGCTCCAAGGGTATATAGGCATGCAAGACTTGCAGTCTCGCACAGTGCCCTCCAATTCTGGGCAGTTGCAGGTAAGAACCACGGCTGTCTCCGGTGGGATGATCCATTGCAGTGAACCATCATATTTCATTGACTTATTGAAGGAATGGAGAAGGATTGATTGTTGAGCTTAAGAGGAGATTAATTAAAAGGAATGAACAGTGCGCTCCTTTGGCTTCCCATCTTTTTATTGCATTTCTGATGGTTTCCGGCTGTGATACCCTGGGTGATCAAGGAGTGCCGATCTGAGCCACACATGGCTATCATACAATGCGAGCCTCTGGTAGTCAATCAGGTGTTTGTGTACTTGCGTGGGGAAAGAGGAGATAGGCAGCCTGGCTGGGCTGGGCCTCAAGTATGACCTTGATTAGTACTGCAAGTTTATCTAACGGCTGATAATCGAGAGACATGTTGATCCAATGGCTGAAACTTGTTGATGACGTGGCTAAACTTGGTGACTTCTTTATGGTAATTATTGCTGTCAGTGGGTTGTAACTGTATAGAAAGAAAGGATTTTGTGATGGCACAGTGCACACCATATATTGCTGGGGGCAAATAGAATGGTAAATTGATTTATGTAGGGGTTACTAAACTTCCATTTTTTATATCGTAGTAAGTATTTTGTGTATTTGTCTGGTGATTTTTACCAGTATTTTGCACAAAAGGTCTTTAGTGGGTCTGCTTGTTAAATCTTGGAAACAAAAGGAGGGAAAAATAATGGTCAGTGCGAGTTGGCTTACTGTTCAGATTTCAATGAATATACTTTTAAAGTTTCTGCTGATATTGTTACATTATGTAAAAAGGGAAAATGGTTGATGCAAGTTATTCTTTTCAGCTTTTGTACAAATTTTCATGGTCATGATGCAATATTGAATAACTTCATCTCTTTTAGGCATATGTTCAACAATTGGAGAATAGCAGGCTAAAGCTTACACAACTAGAACAAGAATTGCAACGAGCTCGTCAGCAGGTTTGCTTTTATTGTGTCTCGCTGTTTTGAGCTCTGGCTGCAAGAGTTCATTTCAAGTAGGCTTACGGGAATTTCTCACAGGGCATTTTTATATCCAGCTCAGTGGACCAGACTCATTCCATGAGTGGAAATGGTATATATCAAATCCTTCAATGTTTAATATATAATCACTCTTTTTTGCAGCAGCAACTGTTTGGTTGATCATTACAATGGGATATATGAAAGCAATACATAAACATTCTGCCTTGTTGACAGAGCAATTATACTGTATTTTCTTGCAGGGGCATTGGCTTTTGATATGGAGTATGCACGTTGGTTGGAAGAACACAATAGGCAAATTAATGAGCTAAGGTCTGCAGTCAATGCTCATGCAGGTGATAATGAGCTCCGTGGTGTTGTTGACAAGATCATGTCACACTATGAGGAGATTTTCAAGCAGAAAGGAAATGCGGCCAAAGCAGATGTCTTTCATGTGTTATCAGGCATGTGGAAGACACCAGCTGAGAGGTGTTTCTTGTGGCTAGGAGGATTCCGACCATCCGAGCTTTTAAAGGTCTGTAAAGTCTTACGATGTTCTTGTTGTTTATTTGAGCCATCCTTCTATTGCAAAGCCCCTCCTATTACCAAAACCAATGTTTCTACCATAATATTATTAGCATATCAAGAACAAATTATCAGTCTATACCTATTTTTCCTTCTATTTCATATACTCATATCACCAGGTCATTGTAAACTTGTGCTGTAATAGGCAGATTGTAGTTTTGATAAAACACTATCTTGCTTTGCATAACTCTTGCATACCTCATTTCTTGCCATTGGAGAGCATGTTAGTACTTCATATGGCCTTTCTTTATTTGCTTATGAATTTATTTGAGTAAGAGTTACTAAAAGTAAGAAAACTGCAGCTTCTTTCGACACAGCTTGAACCTCTCACTGAGCAGCAGCTGTCAGGGATAGCCAACCTTCAGCAGTCTTCACAACAAGCTGAAGATGCTCTTTCACAAGGAATGGAGGCCCTTCAGCAGTCCTTGGCAGAAACATTGGCTGGGTCTCTTGGTTCTTCTGGATCAACGGGAAACGTGGCAAACTACATGGGCCAAATGGCAATGGCCATGGGGAAGCTTGGGACCCTTGAGAATTTCCTTCGCCAGGTACCATGTTTTTTCTCTCTCTCTCTTTTCTAGTGTAAATTATGTATGTAAACCTTGGGTATAGTCTTATGATGTCCGTGGAGTATGTAGTATGCGGATTCGAGTAAGCTATAGTTCAAAATTGTGTACTAAATCCTCTTTATCTTTTCCACTATATGAAGGCTGACAACCTGCGGCAGCAGACTCTTCAACAGATGCAAAGGATACTGACCACTAGGCAGTCTGCCCGTGCGCTTCTTGTGATAAGCGATTACTCTTCGCGGCTTCGTGCCCTTAGTTCCCTCTGGCTTGCTCGGCCGAAAGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003265