Os08g0545200

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0545200| Description = Alcohol dehydrogenase superfamily, zinc-containing protein| Version = NM_001068947.1 GI:115477632 GeneID:4346217| Le...")
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Gene Name

Os08g0545200

Description

Alcohol dehydrogenase superfamily, zinc-containing protein

Version

NM_001068947.1 GI:115477632 GeneID:4346217

Length

2494 bp

Definition

Oryza sativa Japonica Group Os08g0545200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27403975..27406468

Sequence Coding Region

27404039..27404171,27404958..27405025,27405101..27405334,27405412..27406086

Expression

GEO Profiles:Os08g0545200

Genome Context

<gbrowseImage1> name=NC_008401:27403975..27406468 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27403975..27406468 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagggagggaaaggagccgaggcggcggcggcggcggtggccggagccggtgaggaggagaacatggcggcgtggctggtggcgaagaacaccctcaagatcatgcccttcaagctcccgccagttgggccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactacctcagggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcgccggcgtgatagaggaggtcggcagcggcgtgacgcacctcgccgtcggcgaccgcgtggcgctcgagcccggcatcagctgctggcgctgcaggcactgcaagggcggccgctacaacctctgcgaggacatgaagttcttcgccacccctcccgtccacggatccctcgccaaccagatcgtgcaccctggtgatctgtgcttcaagctgccggagaacgtgagcctggaggaaggcgccatgtgcgagccgctgagcgtgggcgtgcacgcgtgccgccgcgccgacgtcgggccggagacgggggtgctgatcatgggcgcggggccgatcggcctggtcaccctgctggcggcgcgcgcgttcggcgcgacgcgcgtcgtgatcgtggacgtggacgaacaccgcctctccgtggcccgatccctcggcgccgacgccgccgtgagggtgtcggcgcgcgcggaggacgtcggcgaggaggtggaacggatcagggcggcgatgggcggggacatcgacgtgagcctggactgcgccgggttcagcaagacggtggcgacggcgctggaggcgacgcgcggcggcgggaaggtgtgcctcgtcgggatggggcacaacgagatgacggtgccgctgacgtcggcggcgatcagggaggtggacgtggtggggatattccggtacaaggacacgtggccgctctgcatcgagttcctccgcagcggcaagatcgacgtgaagccgctcatcacccaccgattcgggttctcgcaggaggacgtggaggaggcgttcgaggtcagcgcccgtggccgcgacgccatcaaggtcatgttcaacctctag</cdnaseq>

Protein Sequence

<aaseq>MGKGGKGAEAAAAAVAGAGEEENMAAWLVAKNTLKIMPFKLPPV GPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAV GDRVALEPGISCWRCRHCKGGRYNLCEDMKFFATPPVHGSLANQIVHPGDLCFKLPEN VSLEEGAMCEPLSVGVHACRRADVGPETGVLIMGAGPIGLVTLLAARAFGATRVVIVD VDEHRLSVARSLGADAAVRVSARAEDVGEEVERIRAAMGGDIDVSLDCAGFSKTVATA LEATRGGGKVCLVGMGHNEMTVPLTSAAIREVDVVGIFRYKDTWPLCIEFLRSGKIDV KPLITHRFGFSQEDVEEAFEVSARGRDAIKVMFNL</aaseq>

Gene Sequence

<dnaseqindica>65..197#984..1051#1127..1360#1438..2112#atcacctgctctctgcaaacactgtgactttgggtgagtgagtgagtgagtgaagaggaggaagatggggaagggagggaaaggagccgaggcggcggcggcggcggtggccggagccggtgaggaggagaacatggcggcgtggctggtggcgaagaacaccctcaagatcatgcccttcaagctcccgccagttggttcgtgtgaaatcctctcctgtccctgaccttggttgttctttgataaacaaattcactttgctctgtgatgggagtgctactctcttcttgttgatatgttttctttcgtggagagataaaaaattggccggttgttgtgctaatttgattccttgggaatagttcagaatttttggtgtagcagtaactcagttcagaaatcccctgggtgtagtagtatactttcttttccaatctttttctgataatttcatcagttgttgtggtagtttattttcctgtccaataacccaggtagttctgactattcccttttttttttatattatcctgtcttggataatatataaagcatgttgagtaatagtagcacgtttccagtttcctgaaagatgattgctagtacttgctgagtgcatcgtgtaacaaaaactctattcttctaatatattgacgtgtaattcttttgcgtgttcgcgaaaaaagatgattgctagtacaaaactaaggttttggcacttagaaagaagaaatatccctttcctgtttatgaaatgctagtctgtttcatgtggacgcctactacttcactatgcaatcagctcatgctatgcctgagtctcaaaagctcagctcctgaattttgatatgttttttatgatatttgtttctttataagcgtcaagcatttgcattcgtctgctgtatatggctacaaatgtgagtgtgaaattcagtaaaaatgttggatgaaacaacactgagatagatgaccattttcagggccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactacctcagggtgatctgttgttcgctcacagaaagaatgaaagataatgtggcttatatatgtttgttgtttgagtgcgtgcaggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcgccggcgtgatagaggaggtcggcagcggcgtgacgcacctcgccgtcggcgaccgcgtggcgctcgagcccggcatcagctgctggcgctgcaggcactgcaagggcggccgctacaacctctgcgaggacatgaagttcttcgccacccctcccgtccacggatccctcgccaaccaggcaagcaagcaattcagctcgatttcgatttctctccaagaagaagatgcaattctgatcaatgtcgtggtactcagatcgtgcaccctggtgatctgtgcttcaagctgccggagaacgtgagcctggaggaaggcgccatgtgcgagccgctgagcgtgggcgtgcacgcgtgccgccgcgccgacgtcgggccggagacgggggtgctgatcatgggcgcggggccgatcggcctggtcaccctgctggcggcgcgcgcgttcggcgcgacgcgcgtcgtgatcgtggacgtggacgaacaccgcctctccgtggcccgatccctcggcgccgacgccgccgtgagggtgtcggcgcgcgcggaggacgtcggcgaggaggtggaacggatcagggcggcgatgggcggggacatcgacgtgagcctggactgcgccgggttcagcaagacggtggcgacggcgctggaggcgacgcgcggcggcgggaaggtgtgcctcgtcgggatggggcacaacgagatgacggtgccgctgacgtcggcggcgatcagggaggtggacgtggtggggatattccggtacaaggacacgtggccgctctgcatcgagttcctccgcagcggcaagatcgacgtgaagccgctcatcacccaccgattcgggttctcgcaggaggacgtggaggaggcgttcgaggtcagcgcccgtggccgcgacgccatcaaggtcatgttcaacctctagatcgatccatccatcgatcgatcgacagcaaaatatgtgacgggtttggaacgtatgtcgatcggacaaaaaaatgtgtgcttgctttgctggttgccgtgtctgtctgtctctacatgaataaaaggcggcaacgttctgtcctcatggactaagcgtgtgcattgtctgtttcaattcattcgatggttgttgaacactaggggtgggaggggggaaatcgaaactcgcagctcggatcggcttgtagcaagttcggcttggatcagcttggactcgtaatcttaatgagtcgagctgagctagccttttaactcatgagctgctcgtttaactcgttagtacaagatataaccaaaccttcgtaaacttggtgcttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0545200, RefSeq:Os08g0545200