Os08g0545600

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0545600| Description = Cyclin-like F-box domain containing protein| Version = NM_001068951.1 GI:115477640 GeneID:4346221| Length = 2072 bp|...")
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Gene Name

Os08g0545600

Description

Cyclin-like F-box domain containing protein

Version

NM_001068951.1 GI:115477640 GeneID:4346221

Length

2072 bp

Definition

Oryza sativa Japonica Group Os08g0545600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27414624..27416695

Sequence Coding Region

27414624..27414652,27415183..27415348,27415583..27415691,27416112..27416695

Expression

GEO Profiles:Os08g0545600

Genome Context

<gbrowseImage1> name=NC_008401:27414624..27416695 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27414624..27416695 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacctgccggacgacctgttgctggaagtcctccgccgcctcccgccgatcagcctcgccgcgtcgcgcgtcgtctgcagcgcatggcgcgccgccgtcgacgccaaccgcctcctgcgcgcggacctcctccccctctccgtcgccggcatcgtcgtcaaccccctctccctgggctcgcgcttcctctgccgccccaatgccgcggcgaccatcgccgacgacctcgacgacatccgcaacacgagcagaggcatcttcaaccgcttcgatttccgagtcagcgaccactgcaacggcctcttcttggtcgacgacgacgtccagcacgtggttaacccggacacgaggcagtgggcgccattgccgggctatccaccgccgcatccgtgctacccgcacaagctcttctcccccaccatctgcctcgtgttcgatcccgccgtatcgcctcacttcgaggtgttggtgattccgcggctccgctccgaattacgcaggccacgagaatggccgccgtcgccgttcgtcctgcgtgctttctcgtctaggacgggcggcgatcaatgggaggataggatatcactatcaaacgggacttaccgtgtgattcaatcggagcctagcatgtcgctgagatatagggagaaacatccagacctttatcttgggaaatcagaaaaggggagggactcttatgatgacgatgatgatcatcatgagagcaaccgccatgccaaacatgttactttcttaggattccatccttttgatgaagaggttgtgttcctcggtgaaactttcagaaggggatttgcctataatctgaacaactcagagatccaagacctgggattatatgatatctttcttaagcaataa</cdnaseq>

Protein Sequence

<aaseq>MEDLPDDLLLEVLRRLPPISLAASRVVCSAWRAAVDANRLLRAD LLPLSVAGIVVNPLSLGSRFLCRPNAAATIADDLDDIRNTSRGIFNRFDFRVSDHCNG LFLVDDDVQHVVNPDTRQWAPLPGYPPPHPCYPHKLFSPTICLVFDPAVSPHFEVLVI PRLRSELRRPREWPPSPFVLRAFSSRTGGDQWEDRISLSNGTYRVIQSEPSMSLRYRE KHPDLYLGKSEKGRDSYDDDDDHHESNRHAKHVTFLGFHPFDEEVVFLGETFRRGFAY NLNNSEIQDLGLYDIFLKQ</aaseq>

Gene Sequence

<dnaseqindica>2044..2072#1348..1513#1005..1113#1..584#atggaggacctgccggacgacctgttgctggaagtcctccgccgcctcccgccgatcagcctcgccgcgtcgcgcgtcgtctgcagcgcatggcgcgccgccgtcgacgccaaccgcctcctgcgcgcggacctcctccccctctccgtcgccggcatcgtcgtcaaccccctctccctgggctcgcgcttcctctgccgccccaatgccgcggcgaccatcgccgacgacctcgacgacatccgcaacacgagcagaggcatcttcaaccgcttcgatttccgagtcagcgaccactgcaacggcctcttcttggtcgacgacgacgtccagcacgtggttaacccggacacgaggcagtgggcgccattgccgggctatccaccgccgcatccgtgctacccgcacaagctcttctcccccaccatctgcctcgtgttcgatcccgccgtatcgcctcacttcgaggtgttggtgattccgcggctccgctccgaattacgcaggccacgagaatggccgccgtcgccgttcgtcctgcgtgctttctcgtctaggacgggcggcgatcaatgggaggataggtccttcgttcgggaaggcccccggcctacgtacaaaaggcagacttgagtttcggcggctactatcgcgtcaaacaacagcagtgttgtgtctattgcaaaggagcgctctatgtgaattttcaggctaacaatttcactatcaggtaactatctatatatctataacttcaattcttggctatctttatttactttggttattgttgttcgttgttgttgtacaattcacatagtgatttgctccggtctagcaaaaagtacatcgaggtaccggtacctcacggtatcaaatcatttccgatcgttggatctgtatctcgaggtactttttgatgaaccagagcaaatctcattcacatatatatatatatgcataatttactaatgtatgttatcctggcctttttttttccataggatatcactatcaaacgggacttaccgtgtgattcaatcggagcctagcatgtcgctgagatatagggagaaacatccagacctttatcttgggaaatcagaaaagggggtacattgtgcacgcgttagtttcgaccatcttatggtgttgttccttagtgaatcgcatggtcagatgaagtgggtgttgaagcatcgtagctgaattgcatccttgctacctcgtcgcaccacctacgaagaacagagtggcgaatcatggatcttacatggtgctaactatcaaggagattttcacgctgatgctgacgatgtatcatggatgtttaattgggaatggcagagggactcttatgatgacgatgatgatcatcatgagagcaaccgccatgccaaacatgttactttcttaggattccatccttttgatgaagaggttgtgttcctcggtgaaactttcagaaggggatttgcctataatctgaacaactcagagatccaagacctgggtaacttgtgcccaaaattctatgatctcacttatcaccaggcgttgatacaaacgtcttttgtgtacacgccttgctggattggattagagagagctctctctctctctctctctctctctctctctttctctctccctgtaaatagctagtactccctccgtttcaaaatatttgacaccgttgactttttagcacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttacatattttataaaattttttaaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtagtaatttagaatctcaccttgttgtagattattttgagtctgtgttttagtggcaagcagatgaagagagcagatgtactatttcatcccaatatatacttacattagttttagtagcatcaatctttgaaatttttaggattatatgatatctttcttaagcaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0545600, RefSeq:Os08g0545600