Os09g0443400

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0443400| Description = Conserved hypothetical protein| Version = NM_001188931.1 GI:297726992 GeneID:9267981| Length = 3947 bp| Definition ...")
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Gene Name

Os09g0443400

Description

Conserved hypothetical protein

Version

NM_001188931.1 GI:297726992 GeneID:9267981

Length

3947 bp

Definition

Oryza sativa Japonica Group Os09g0443400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17151351..17155297

Sequence Coding Region

17151351..17151808,17151910..17151943,17152136..17152652,17152946..17153499,17154361..17154672
,17154971..17155297

Expression

GEO Profiles:Os09g0443400

Genome Context

<gbrowseImage1> name=NC_008402:17151351..17155297 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17151351..17155297 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacgacagcgaagaagcggaagcgagagtgggatctattgtcgatccaagaggaggggacgatttcccactcccctcaaacaggggagatctctgtccgcggcgccgatctggagtccggcgaggactcctccgactctgtcacctccgacgctggcagcgccaaggctgctcccgacgacgtgcttcatatcgcgcatgccctctgcaaggtttgcgccaagtctcctagagccgtcatcgactttgttcgaagagtgagccctgccaccgtcggccgttcgattgattgggacgtcgtccgcgaggaagagtcatctaagatgggcgatggccgtagccggtggaccgatatggaggttcgtgtgtttcttgagagctgcttggaggagatggcagcgttcaccatcacctccaactcccccaagccgcaggcatggcagaacctaatacacaagatgtacaccaagtgcaagaagaaggtgaacaaggctcaattggagtacatttgggggcagtgtaagaagcggtacaacaggtgggtgtggctagaatcgcatgcaagcgggctgggtcgtgatccccatacatcagccattgttgccgatgatgagtggtgggaaagcaagaatgcgcaaaataaaggtgtcttaagcttcaggaatgatcctctgaagcacattgaccttcaccacgcggtattcagtgggcgcacagttgtcggaaaccactccgccgtcgcaggggcagccccacaggcaccgcaaggagcagttcagtggcagaccatcgacatggcgcagctcgctgctgcttatagaccaccacctccaactccacccccaacggcagcagaccggggcaagggaaagaggctagcagcaaacactactgcctcagggagttcttccaagaagtcccgaagcgactccgctggactggctttggagaggattgcggacatccgacagcagagctaccagagtcgtgttgctcagatggaagcagagaagtctatgggccttgatgcgtgcatggagttggtggaaaatgatggccatgaaattggaggaagtgtgtggtatgctgcttgtgcgctattccgtgacccattgacctgcaaatgctttgttcgactcaaggacgctgctaggcgcttggaatttatacgcactggtggtactggacagaaatcggcgatgagttacggcgcgggtggatcgagttggaatggaggcggtcacacaagcagcgaagaagaagatgccatcattgagtacatggctgctacccttgatttcaatgagagggcaccaaggagaataccggtgcaaaccggtgtcagttggatgatggacacgatggcaaatcgaagccaatgcagggcaatgttcaggcttactgcagaggagatacacaatttgcatgatctattggtcacttcttttggtcttgtaggaacagcaggggtctgttccatggaaaagcttggtattttcttgtacacgatgggtggaaatcgtccaatcagagacgcgaacaatcggtgggtccgctccaactcgacagtgtcggttcacttccaccatgttttgcaggctatgaatgatctcgctgggaaaatattgaaaccggttgatcccaacttcttagattacaaccctcagattctgcaagagaatcctttcaagcctttctaccaatcagcttacccctacgatttcccacgggtaccgttaggcaggtacctacttgtcgactccggatttcctaccaggatgggcttccttgcaccgtacccacatgtacggtaccacagggatcaacttgcggtcgagggagccccgccacccgtaggacgggaagagactttcaaccatcgacactccacgttgcgagggatcgtggaaagacaatttggcatcgcaaaaaagatgtggaaaatattgaaagaaatcccttattaccgagatgaggacatccctgcacgcatcattcatgcagctttcgctctacagaactttaggttggatagtaaagatccgacctatcggttcactaatgctctctacaacggcaatccagtgccgctgctgaacgattcattcgaccatatgtattacgcaacaaatagcgaggccgctatgagcatgttgcgtgactgtattgctgatgatgcgtacaataactaccattag</cdnaseq>

Protein Sequence

<aaseq>METTAKKRKREWDLLSIQEEGTISHSPQTGEISVRGADLESGED SSDSVTSDAGSAKAAPDDVLHIAHALCKVCAKSPRAVIDFVRRVSPATVGRSIDWDVV REEESSKMGDGRSRWTDMEVRVFLESCLEEMAAFTITSNSPKPQAWQNLIHKMYTKCK KKVNKAQLEYIWGQCKKRYNRWVWLESHASGLGRDPHTSAIVADDEWWESKNAQNKGV LSFRNDPLKHIDLHHAVFSGRTVVGNHSAVAGAAPQAPQGAVQWQTIDMAQLAAAYRP PPPTPPPTAADRGKGKRLAANTTASGSSSKKSRSDSAGLALERIADIRQQSYQSRVAQ MEAEKSMGLDACMELVENDGHEIGGSVWYAACALFRDPLTCKCFVRLKDAARRLEFIR TGGTGQKSAMSYGAGGSSWNGGGHTSSEEEDAIIEYMAATLDFNERAPRRIPVQTGVS WMMDTMANRSQCRAMFRLTAEEIHNLHDLLVTSFGLVGTAGVCSMEKLGIFLYTMGGN RPIRDANNRWVRSNSTVSVHFHHVLQAMNDLAGKILKPVDPNFLDYNPQILQENPFKP FYQSAYPYDFPRVPLGRYLLVDSGFPTRMGFLAPYPHVRYHRDQLAVEGAPPPVGREE TFNHRHSTLRGIVERQFGIAKKMWKILKEIPYYRDEDIPARIIHAAFALQNFRLDSKD PTYRFTNALYNGNPVPLLNDSFDHMYYATNSEAAMSMLRDCIADDAYNNYH</aaseq>

Gene Sequence

<dnaseqindica>3490..3947#3355..3388#2646..3162#1799..2352#626..937#1..327#atggagacgacagcgaagaagcggaagcgagagtgggatctattgtcgatccaagaggaggggacgatttcccactcccctcaaacaggggagatctctgtccgcggcgccgatctggagtccggcgaggactcctccgactctgtcacctccgacgctggcagcgccaaggctgctcccgacgacgtgcttcatatcgcgcatgccctctgcaaggtttgcgccaagtctcctagagccgtcatcgactttgttcgaagagtgagccctgccaccgtcggccgttcgattgattgggacgtcgtccgcgaggaagagtcatctaaggtattggtttgtattaatttgttcatttccgattcaattttactccctccgtttcgaaatgtttgacgccgttgactttttagcatatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttccctatcatttgattcattgttaaatatattttcatgtaggcatataattttacatattttataaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtatttgacttgcacggagtagatgggcgatggccgtagccggtggaccgatatggaggttcgtgtgtttcttgagagctgcttggaggagatggcagcgttcaccatcacctccaactcccccaagccgcaggcatggcagaacctaatacacaagatgtacaccaagtgcaagaagaaggtgaacaaggctcaattggagtacatttgggggcagtgtaagaagcggtacaacaggtgggtgtggctagaatcgcatgcaagcgggctgggtcgtgatccccatacatcagccattgttgccgatgatgagtggtgggaaagcaagaatgcggtacgtacacttgaccataaatattttgaaccaacaattttgcctacaattggtattatctgaaatttagtacatgcatgcaattataaatacagttttgtgaggtgtaataatttttttgttcaaattgtgtgtgccaacaaatgactagctgcagtaaaatggaaggattgtgctcacatatgtttcatagttgttactgtcatgtcgtttttagtaatgtgtgccattcccttgtatttaagttaacaaaatgatgtttacactgtctaccatgaactgattggcaatgattgcgagaagtaaatgatcttgtacatgtgacattcaaaagcattttaacagattcacatgtgtttaattgtgaaggatatagcttacacaatgtagcattttattagcttatgcaatgtagcagtcaatgtaacatggtaatgcttataggttttgttctctgcataaacaaaatctatatgtagtgtatcagtaaattaggaaagatcttgtacaagtcatttaggaacatgttaatacatattcaactagctgtacacaccttctttgtgatgtatatagagagaatgaacaaaaatgtgctcatctacaaagaatataacatatgcagtttatcttatgtttacaatgttcaaactatctttctttcattctgtcagatgtgtggcccattgtaacatgtactcctgattatatttgataacttggtaccaatgtgcacatttactgccagcattttagtagtaatgcacattggactgcacatattcattatgttcaatgtttgcacaagcctaatgcacttgccttgtactaacttatttttactgtctacttatgttgcagcaaaataaaggtgtcttaagcttcaggaatgatcctctgaagcacattgaccttcaccacgcggtattcagtgggcgcacagttgtcggaaaccactccgccgtcgcaggggcagccccacaggcaccgcaaggagcagttcagtggcagaccatcgacatggcgcagctcgctgctgcttatagaccaccacctccaactccacccccaacggcagcagaccggggcaagggaaagaggctagcagcaaacactactgcctcagggagttcttccaagaagtcccgaagcgactccgctggactggctttggagaggattgcggacatccgacagcagagctaccagagtcgtgttgctcagatggaagcagagaagtctatgggccttgatgcgtgcatggagttggtggaaaatgatggccatgaaattggaggaagtgtgtggtatgctgcttgtgcgctattccgtgacccattgacctgcaaatgctttgttcgactcaaggacgctgctaggcgcttggaatttatacgcactggtggtactggacagtcatctggtggcacctagtagtttgtgcactgtactttactttgagttgtgatgtgcgatgttttccaaataaaccattatttatgtttagaactcagtgtgctaacaatttttacattctgtgagtccctaaacatttgcggctttatatccaattcgagcaactacgtattccattgcattgcttttatatccaaataattcttcgattgcatagatcactgccattattaatttctatccttttgattatgacaaacattgcctattcttcggttctcatatgttaaaggaaatcggcgatgagttacggcgcgggtggatcgagttggaatggaggcggtcacacaagcagcgaagaagaagatgccatcattgagtacatggctgctacccttgatttcaatgagagggcaccaaggagaataccggtgcaaaccggtgtcagttggatgatggacacgatggcaaatcgaagccaatgcagggcaatgttcaggcttactgcagaggagatacacaatttgcatgatctattggtcacttcttttggtcttgtaggaacagcaggggtctgttccatggaaaagcttggtattttcttgtacacgatgggtggaaatcgtccaatcagagacgcgaacaatcggtgggtccgctccaactcgacagtgtcggttcacttccaccatgttttgcaggctatgaatgatctcgctgggaaaatattgaaaccggttgatcccaacttcttagattacaaccctcagattctgcaagagaatcctttcaagcctttctaccaatcagtgggagctgtcgatggcacacatattccagttctgcctaatgcagctagcgctatgcaacacaggaaccgtcaccacataacaaccagaaatgttctagtaatatgtgatcatgatgggagaattattttctgtgatgctggctggcctggatcagttcacgaccaaaggattctcaatgaggcagtgcaggcttacccctacgatttcccacgggtaccgttaggtgagttgtatcggtcaatacactttttttattgccaaatgtcttgattttatttaattttacacatgtgcactaatatttaattatgcgccgttaaccaggcaggtacctacttgtcgactccggatttcctaccaggatgggcttccttgcaccgtacccacatgtacggtaccacagggatcaacttgcggtcgagggagccccgccacccgtaggacgggaagagactttcaaccatcgacactccacgttgcgagggatcgtggaaagacaatttggcatcgcaaaaaagatgtggaaaatattgaaagaaatcccttattaccgagatgaggacatccctgcacgcatcattcatgcagctttcgctctacagaactttaggttggatagtaaagatccgacctatcggttcactaatgctctctacaacggcaatccagtgccgctgctgaacgattcattcgaccatatgtattacgcaacaaatagcgaggccgctatgagcatgttgcgtgactgtattgctgatgatgcgtacaataactaccattag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0443400, RefSeq:Os09g0443400