Os08g0546400

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Gene Name

Os08g0546400

Description

UBA-like domain containing protein

Version

NM_001068956.1 GI:115477650 GeneID:4346226

Length

5686 bp

Definition

Oryza sativa Japonica Group Os08g0546400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27453143..27458828

Sequence Coding Region

27453409..27453522,27454215..27454271,27454349..27454492,27455017..27455181,27455267..27455455
,27455551..27455782,27456073..27456179,27456267..27456350,27456432..27456942
,27457040..27457101,27458620..27458703

Expression

GEO Profiles:Os08g0546400

Genome Context

<gbrowseImage1> name=NC_008401:27453143..27458828 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27453143..27458828 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaggccgacgcaggacgcgatcgacaccttcgtcggcatcaccggcgccgatgaggccgtcgccgcccgcaagctcgaggaacatcatggtgacctaaatgaagctgtgaatgcctatttcaatgaaggagataggaccagcaccagagccaatgaaaatcctatacctaccggttatgatgacatggagttggatgaaccatttggtcctgttcctacatttcacatgcctttgggcaaccctttttcacttctggatcaaggttttttagaacgagctgctgctgtgtatggtgagggacctcatattacacaccctagggaggtgaggcggatagatgttgaagttaaggacaacaatactccagcaggtagttctggtcatggtcctgttattgaagatgttactggacatgagttttcacatgggccggaaattcgtgggactgttctgattgatgaagatgatgatgatgataacttgccatctgctcaagatactcgtctcccaagcaatccttcaacttcaaactattctgtaccaagagctcctccaattgctaatgttagtgactacaacaatgacatagaagaggagatggttcgcgctgcaatagaagcatcaaaaagggacgcagatggactgacaaatggtctaagaagtggagaacgtgaaaatgcatcacgtggcagagatgatgatgagattgctcgggcggtttctatgtccttggagacagcagaacaagagagagttctgcgccaagtgggagcgcatgtgtctgatcattctgatttatccgataaggaagacattgaaggagcaactgggacagtggaaaggcaagtaccaacttcagggaaagttggaacatctgatcagttggtagatgaagagaatttccaggatgatgacgttgaggaacattcttttgttagacaacactctaggcgtgtaccatctggaaatgatgagtccacagaagcacttgaaagggccaacagtcatccatccagtctcctccctcataacattgaaaacaatcagcagttcaatggagtttttccatcagagtggggtggcatttcttctgaagaacatgatgaagctgttatgcttgaagctgcaatgtttggtggaattcctggaagagcagcatatccattttctctcccgtatcatcaaaactcaagtcgctaccccacggttgctcatcctccgtcaccaacattaactgcacaacggttgttaagggagcagcaggacgatgagtatctagcatctctcgaagctgaccgagaaaaagaattgaaggcagagcaggaggctgagctccgcagattagaagctgctgctgaaagagaagctgctattgcaaagcaaaaacaagaggaggaagaaaagcgaagaaaacaactcgaggaagaggaattggagtccaagcttgcagccaaacaagcatcattgccaaaggagccattaccagatgatgtaggggccgtcactgttgtagttcgcatgcctgatggtcgtcgtcagggaaggcgctttatgaaatccgacaaccttcaggtcctttttgatttcatagatatctccaggactttcaaaccaggaacctataggctggtgaggtcttatcccaggcgtgcattcaccgactctgagtctcagatgtctttaagtgatcttggcctcaatagcaagcaggaagccttgtttctagagcagatttcaggatag</cdnaseq>

Protein Sequence

<aaseq>MVRPTQDAIDTFVGITGADEAVAARKLEEHHGDLNEAVNAYFNE GDRTSTRANENPIPTGYDDMELDEPFGPVPTFHMPLGNPFSLLDQGFLERAAAVYGEG PHITHPREVRRIDVEVKDNNTPAGSSGHGPVIEDVTGHEFSHGPEIRGTVLIDEDDDD DNLPSAQDTRLPSNPSTSNYSVPRAPPIANVSDYNNDIEEEMVRAAIEASKRDADGLT NGLRSGERENASRGRDDDEIARAVSMSLETAEQERVLRQVGAHVSDHSDLSDKEDIEG ATGTVERQVPTSGKVGTSDQLVDEENFQDDDVEEHSFVRQHSRRVPSGNDESTEALER ANSHPSSLLPHNIENNQQFNGVFPSEWGGISSEEHDEAVMLEAAMFGGIPGRAAYPFS LPYHQNSSRYPTVAHPPSPTLTAQRLLREQQDDEYLASLEADREKELKAEQEAELRRL EAAAEREAAIAKQKQEEEEKRRKQLEEEELESKLAAKQASLPKEPLPDDVGAVTVVVR MPDGRRQGRRFMKSDNLQVLFDFIDISRTFKPGTYRLVRSYPRRAFTDSESQMSLSDL GLNSKQEALFLEQISG</aaseq>

Gene Sequence

<dnaseqindica>5307..5420#4558..4614#4337..4480#3648..3812#3374..3562#3047..3278#2650..2756#2479..2562#1887..2397#1728..1789#126..209#gcgactcctcctcctcttctcgtcttgggtttctctccctcctcctcgccgtcgcgtcgccgcggaggcggaggcggagagccaaggccgcggcggtgcagccgccctcccctcctcccgccgccatggtgaggccgacgcaggacgcgatcgacaccttcgtcggcatcaccggcgccgatgaggccgtcgccgcccgcaagctcgaggtgacgcccacccgctccgttcccgtttgttccccccatcacccccccccttctcctcccttcaccgtcgccattctacgcctcggaatgtgtggggcttggatgcgtcgggtctcgagttaggtttgttgtgttagatggcgttgcgctgcggcgggggatgggtggtgcgggtgcgatgcgcgatttgcgggaggtgatgagaacgtggggggggggatggggttctagggtgtttagagttgagaacattttggggattggggattgtgtggtgcaatgccttcgaattttgagctttttagtgatgcatatgctcttagttttctcttcagcttgcgcggtcaggaatgctgaacacattagtggattagtttatgggcattgctatgggtacgattgtgaattgtcgattcacgcggtaggacatccaactttgtttatgttatggaactttgttgacacaatcctacttggagtaagagttggatggagtaattcctattttaatgtttttttagggaaatcctattataatgtcttggtcttccattttgtaggaagaccgctgttgtcactgaatggtttaataaatgtttgcagatctgctttctgtaattttattgaacattgatttatctatcgggcaagatggtctttattgatcaatagtctttgtgagaacaattttcagattatggtccattgagtttaagcatgagaaaattactttattcaatctttatgtggatttttgactagtacagcaaataagcattctgcttagtgaatatttggacaggttagttatattgttgttgttgcaataactcttgccaatcattggtctgtttggaaatgctctgttggagtgctgagtgaagtactgctttatacttgtttcttctggttgcagtaggaataacttagcatagtaccttctgcacctctgccgaagatgctgaatcagagtctgttgggccttagcctctttcttcttcaattatgagtttggaaagattgttatcttattttgttaggaatcatatatattaggatccttattacaactcctctttatataaaggaaatatcaggaagaaataatgcgagcaaagtattacgctacttcttctgcctctcttccactgcatttcttctgcctctcttccactgcatgcttctgcccttttccccgttacccttgagtactacttcttccgttctgaaatataagcatatctaggattcaaattctgtacacaatataaggattcctagaatacttgtcccattaatcacctttcattcaaattgtctccccatcttaccacaaccacccctcatttaatcaggacactatattcttctctcctcaaaacttaatctatgctaaacaacctagaactgcatatatttgggaatggagggggtacaacacacagaggcatacacaaagtccttacacaagtagatatttcaaaacgaatttctaactgactaaaatcattctaccaggaacatcatggtgacctaaatgaagctgtgaatgcctatttcaatgaaggagataggaccaggtacgtgttttttctcctagcggttcttatgtgcatttattgacctgataccatgttgttcccgttgttatatttaactgactcatacaattttcagcaccagagccaatgaaaatcctatacctaccggttatgatgacatggagttggatgaaccatttggtcctgttcctacatttcacatgcctttgggcaaccctttttcacttctggatcaaggttttttagaacgagctgctgctgtgtatggtgagggacctcatattacacaccctagggaggtgaggcggatagatgttgaagttaaggacaacaatactccagcaggtagttctggtcatggtcctgttattgaagatgttactggacatgagttttcacatgggccggaaattcgtgggactgttctgattgatgaagatgatgatgatgataacttgccatctgctcaagatactcgtctcccaagcaatccttcaacttcaaactattctgtaccaagagctcctccaattgctaatgttagtgactacaacaatgacatagaagaggagatggttcgcgctgcaatagaagcatcaaaaagggacgcagatggactgacaaatgtaagactgcttatcagatatctacttttaaaaatttggaacctacacatcttttttatcaaaacatttggtactatgcagggtctaagaagtggagaacgtgaaaatgcatcacgtggcagagatgatgatgagattgctcgggcggtttctatgtccttggaggtagttgttgaacacacaaagttctgtttttatgtgttctgttttttgtgtgttatgctgaattcatttttttttgtgactatttagacagcagaacaagagagagttctgcgccaagtgggagcgcatgtgtctgatcattctgatttatccgataaggaagacattgaaggagcaactgggacagtggaaaggtgtccatcaaatatattgtctaacaatctatgcatgtgtgatttttcattatatttggttattcatatatcaagttttattaggttcctagttactcaatgtccattgttccatgaatcttgagttctcttaatggtttcagcttcataaaagcaatgcattcttgcagctgcacctaccatattctttggatatcttttttgttattaagtttgttgtgattagctgagcatgagcttcttctatctagttgtgactgattcattgtacatattatttcttgttgtaggcaagtaccaacttcagggaaagttggaacatctgatcagttggtagatgaagagaatttccaggatgatgacgttgaggaacattcttttgttagacaacactctaggcgtgtaccatctggaaatgatgagtccacagaagcacttgaaagggccaacagtcatccatccagtctcctccctcataacattgaaaacaatcagcagttcaatggagtttttccatcagaggtggtattttaatccatcacacctgtaatgagatagaatttaaccatactacagcttcttcactgcttacaaacccgttaatttttgttgcaaagtggggtggcatttcttctgaagaacatgatgaagctgttatgcttgaagctgcaatgtttggtggaattcctggaagagcagcatatccattttctctcccgtatcatcaaaactcaagtcgctaccccacggttgctcatcctccgtcaccaacattaactgcacaacggttgttaagggagcagcaggtatagactttggagtagtatctatctgtgggataacataacaacggctgcatgcaagtatgttaacctggtgtttgaattgtaggacgatgagtatctagcatctctcgaagctgaccgagaaaaagaattgaaggcagagcaggaggctgagctccgcagattagaagctgctgctgaaagagaagctgctattgcaaagcaaaaacaagaggaggaagaaaagcgaagaaaacaactcgaggaagaggtaattgagttagtagttagcgcgtttgagagttgaatggatagtagtcatagaactgttcatacattagttatattggcatataaccatgctaatcatatcgttatggtttattaaattaaagtcatgccacactgttggcaggccagtgtgcttgatgaattttatcattagtgcagatacgattgcatgtcggtaacaatgtctggattgttgcaagttatattgctttacttgtttcttatctggaggacttctcagactaactaactccttaggtctgatgagaaacattcttctgtattcttctgtaaattatgtcattagtagtaagaaaaggtagttaaaagctagcactatgatctgactgtgaccatctttaccatctacgtaatatcaaataaatgataaggaagtaattatgtgtcctttagaacttgcctactatgccttttccatggtttgtgttattttcaccacacagtggtatattgattatgttatttatggcaatgtgagaataggaattggagtccaagcttgcagccaaacaagcatcattgccaaaggagccattaccagatgatgtaggggccgtcactgttgtagttcgcatgcctgatggtcgtcgtcagggaaggcgctttatgaaatccgacaaccttcaggtaacattcttttagttgccagaatacctaatgaaactcactggtattccctcaataaatttttggaattcttgcaggtcctttttgatttcatagatatctccaggactttcaaaccaggaacctataggctggtaactttgctaaccttttcatttttttcatggtgtttcaggaatgttctatacacagaaatcagtgtagtttaccattaacctgttgaaactggatttgcactagcacaagctggttatttacgccagcacaaaaagaaaaaaaaaacgatgattctgcctgcttttatgtcattatgtgtcagtttattttgctattagtgttatcaagtatcatgtaccattcctagaatagatcaatttctgaactatgtgattttaaaagatttaacatcaatactggaggttgtctgatagtcagcgtactcatcccgttgagctaggtcaggataatatgcctgtggcatggtagactgtaaagagattacattgaaaccgcagcaccagctattttttagcactcacacaacatttagtgggcatgctttttattttcattcctctgtttaggtccctaagatttaggatcttgtttgaatatcgtatacacaatgcattctagcttgttggttttgccatgttgtgatatttggattataaaaaaaaactagttacttaagtagcctgtaaacaggggaaaattaatgcatgggagatttcatgttgtttctgttttatagcatttttagatgttgctgattgaatcttgtggtcctgaatattaaatataaatgaaaatctacaatgtgcaggtgaggtcttatcccaggcgtgcattcaccgactctgagtctcagatgtctttaagtgatcttggcctcaatagcaagcaggaagccttgtttctagagcagatttcaggatagggggaaaccgggaaagagttaattgcaattaacacaacagggattcacagaatttttttttctttttacttatgcctggcacatgttcgtgaaaatattagcaaggttcgcatgaaacttggcgttaaggtctcatgaccctcttttgtgttttggaatggtgactctcaagtaccgggtttcatgtgatactcaccctgcatatttgaacagtcagaactcagaatgtacatagactgctgctttcagagctaccgcaattcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0546400, RefSeq:Os08g0546400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0546400&oldid=8260"