Os08g0547300

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0547300| Description = Similar to Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII)| Version = NM_001068963.1 GI:115477664 GeneID:4346234| Le...")
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Gene Name

Os08g0547300

Description

Similar to Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII)

Version

NM_001068963.1 GI:115477664 GeneID:4346234

Length

2203 bp

Definition

Oryza sativa Japonica Group Os08g0547300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27508638..27510840

Sequence Coding Region

27508979..27509614,27509718..27510737

Expression

GEO Profiles:Os08g0547300

Genome Context

<gbrowseImage1> name=NC_008401:27508638..27510840 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27508638..27510840 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatggactcgtcgccgtcgacacaggactgtggcggctggctgctgtacgtctccctcgctgccaaatgcggcggcgacccttgccgcgtcgtcggcttcgtcgccgttgccgtcgtcgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggaggtattggtggaacaggaggggtggtctgggcattgctgccgccattcctgggccccgtgggttgcccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcggcggggggctcgccggcgaggcggcgcctcatggcgctgtctctcggggagacacgggtggtggtcaccgccgaccccggcgtcgcgcgggagctcctcgccagcgcggcgttcgccgaccggccggtgaaggagtccgcgtacgggatgctgttccaccgcgccatcgggttcgcgccctacggcacgtactggcgcgcgctccgccgcgtcgcgtccacgcacctcttctcgccgaggcaggtgtccgcctccgccgcgcagcgcgcggtgatcgcgcgccagatggtggaggccatgaggtccgccgccgccgccgccgccggtggcggcgtggcggcgaggccgttcctgaagcgcgcgtcgctgcacaacgtgatgtggtcggtgttcgggaggaagtacgagctggcggcgccggagagcgaggagacggcggagctgaggagcatggtggacgaaggctacgacctcctcggccagctcaactggtccgaccacctcccatggctcgcaccctttgacctcaagaagacgcggtcaaggtgctcgtcccttgtcccccgcgtcaaccgcttcgtcacccgcatcatcgacgagcaccgtgctcgcctcagcctcgccgtcgacgccgccgtcgacttcaccgacgtccttctctccctccacggcggcgacaagctctccgacgccgacatggtcgccgtcctctgggagatgatctttcgagggacggacacggtggcggtcctgatcgagtgggtggcggcgaggctggtgctgcaccaggacgtgcaggccagggtccatgacgagctggaccgagtggtcgggtcggaccgggcagtgaccgagtcggacgcgtccaagctggtctacctccaagcggtgatcaaagaggtcctgcgcctccacccgccgggcccactgctctcgtgggcacgcctcgccacgtcggatgtacacgtcggcgggttcctcataccctctgggaccaccgccatggtgaacatgtgggccataacccatgaccctgccgtttggcccgacccgaacgagttcaaaccagagaggttcgtcgcagggccctcgtcggaccaggccacggagtttccgataatggggtcggatctcaggctcgcgccgttcgggtcaggaaggcgaagctgccccggcaagtcgctcgccatcgccactgtcggattctgggttgccacgttgctacacgagttcgattggcttcccttgtcagataagtcgcgcggcgtcgatctgtcggaggtgctgaagctgtcgtgcgagatggcaaccccgctggaggcaaggctaaggccgcgacgcaaggtgtga</cdnaseq>

Protein Sequence

<aaseq>MDMDSSPSTQDCGGWLLYVSLAAKCGGDPCRVVGFVAVAVVAFA VTSLLHWLSPGGPAWGRYWWNRRGGLGIAAAIPGPRGLPVLGSMSLMAGLAHRKLAAA AGGSPARRRLMALSLGETRVVVTADPGVARELLASAAFADRPVKESAYGMLFHRAIGF APYGTYWRALRRVASTHLFSPRQVSASAAQRAVIARQMVEAMRSAAAAAAGGGVAARP FLKRASLHNVMWSVFGRKYELAAPESEETAELRSMVDEGYDLLGQLNWSDHLPWLAPF DLKKTRSRCSSLVPRVNRFVTRIIDEHRARLSLAVDAAVDFTDVLLSLHGGDKLSDAD MVAVLWEMIFRGTDTVAVLIEWVAARLVLHQDVQARVHDELDRVVGSDRAVTESDASK LVYLQAVIKEVLRLHPPGPLLSWARLATSDVHVGGFLIPSGTTAMVNMWAITHDPAVW PDPNEFKPERFVAGPSSDQATEFPIMGSDLRLAPFGSGRRSCPGKSLAIATVGFWVAT LLHEFDWLPLSDKSRGVDLSEVLKLSCEMATPLEARLRPRRKV</aaseq>

Gene Sequence

<dnaseqindica>1227..1862#104..1123#aactcaaactgcacttcccttttcagctcttctccaacctcaatttcaccccatttttccatatcctctctgcacacgtacgtacaggtaaacgtgcctgatcatggacatggactcgtcgccgtcgacacaggactgtggcggctggctgctgtacgtctccctcgctgccaaatgcggcggcgacccttgccgcgtcgtcggcttcgtcgccgttgccgtcgtcgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggaggtattggtggaacaggaggggtggtctgggcattgctgccgccattcctgggccccgtgggttgcccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcggcggggggctcgccggcgaggcggcgcctcatggcgctgtctctcggggagacacgggtggtggtcaccgccgaccccggcgtcgcgcgggagctcctcgccagcgcggcgttcgccgaccggccggtgaaggagtccgcgtacgggatgctgttccaccgcgccatcgggttcgcgccctacggcacgtactggcgcgcgctccgccgcgtcgcgtccacgcacctcttctcgccgaggcaggtgtccgcctccgccgcgcagcgcgcggtgatcgcgcgccagatggtggaggccatgaggtccgccgccgccgccgccgccggtggcggcgtggcggcgaggccgttcctgaagcgcgcgtcgctgcacaacgtgatgtggtcggtgttcgggaggaagtacgagctggcggcgccggagagcgaggagacggcggagctgaggagcatggtggacgaaggctacgacctcctcggccagctcaactggtccgaccacctcccatggctcgcaccctttgacctcaagaagacgcggtcaaggtgctcgtcccttgtcccccgcgtcaaccgcttcgtcacccgcatcatcgacgagcaccgtgctcgcctcagcctcgccgtcgacgccgccgtcgacttcaccgacgtccttctctccctccacggcggcgacaagctctccgacgccgacatggtcgccgtcctctgggtatgtacagtactccagtaattaattaccactcgataatgagcttaattaattgctcctaattaagcaaatcaactcataaattgataatttaattttgcaggagatgatctttcgagggacggacacggtggcggtcctgatcgagtgggtggcggcgaggctggtgctgcaccaggacgtgcaggccagggtccatgacgagctggaccgagtggtcgggtcggaccgggcagtgaccgagtcggacgcgtccaagctggtctacctccaagcggtgatcaaagaggtcctgcgcctccacccgccgggcccactgctctcgtgggcacgcctcgccacgtcggatgtacacgtcggcgggttcctcataccctctgggaccaccgccatggtgaacatgtgggccataacccatgaccctgccgtttggcccgacccgaacgagttcaaaccagagaggttcgtcgcagggccctcgtcggaccaggccacggagtttccgataatggggtcggatctcaggctcgcgccgttcgggtcaggaaggcgaagctgccccggcaagtcgctcgccatcgccactgtcggattctgggttgccacgttgctacacgagttcgattggcttcccttgtcagataagtcgcgcggcgtcgatctgtcggaggtgctgaagctgtcgtgcgagatggcaaccccgctggaggcaaggctaaggccgcgacgcaaggtgtgatgacgtgtcaccaccgtcacgtgggactaagacgaggagagggaagccgacttccacttccttctagtgcttgttgagatgtgtaaatgtccctaaatgtaaagtgttacgctttgagtagaaatgcccctacgttgtagtgcgtagtattgtacacttgtagtatgtaatgcttgtatttttgtgtgttttgcacgtcctaagtagtggagtagtagctgataatagttagttaattactctgctatttagtcatagttaactacctacctgcaggtgatgagagtgacagtttttttttgtttaattaactgcaggtgatgagtgtagaatagctcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0547300, RefSeq:Os08g0547300