Os08g0547500

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0547500| Description = Similar to Kinesin-like protein NACK1| Version = NM_001068964.1 GI:115477666 GeneID:4346235| Length = 7280 bp| Defi...")
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Gene Name

Os08g0547500

Description

Similar to Kinesin-like protein NACK1

Version

NM_001068964.1 GI:115477666 GeneID:4346235

Length

7280 bp

Definition

Oryza sativa Japonica Group Os08g0547500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27523164..27530443

Sequence Coding Region

27523455..27523761,27523852..27524150,27526423..27527475,27527552..27527668,27527757..27528090
,27528311..27528435,27528510..27528575,27528655..27528722,27528802..27528883
,27529000..27529113,27529189..27529289,27529392..27529481,27529862..27530066

Expression

GEO Profiles:Os08g0547500

Genome Context

<gbrowseImage1> name=NC_008401:27523164..27530443 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27523164..27530443 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcggcggaggaggaggcggcggcggcatgggacaaggcggaggccaaggaggagaggataatggtgtcggtgcggctgcggccgctcaacggcagggaggccggcgacagctgcgactgggagtgcatcagccccaccaccgtcatgttccgcagcaccgtccccgagcgcgccatgttccccaccgcctacacctacgatagggtgtttggtcctgattcctctacaaggcaggtctacgaggaaggagcgaaagaagttgctctatcagttgtcagtggaatcaactcaagcatattcgcgtatgggcaaacaagcagtggcaagacttacacgatgaccgggataaccgagtatagtgttctcgacatctatgactacatcgaaaagcatcctgaaagagaattcattttgagattttcggcaatagagatatacaatgaagctgtgagggacctcctgagccacgacaccacacccctcagacttcttgatgatccggagaaaggaactaccgtagagaaactcactgaggaaaccttgagggacaaggatcatcttaggaaccttcttgctgtgtgtgaagctcaaaggcagattggagaaactgctttgaatgaaacgagttcaaggtcccatcaaatactcagattgacaattgaaagttctactagacagtatttgggaagaggcaactcaagcacccttgtagcttgtgtgaactttgttgacctagcaggaagcgagcgtgcatctcagactgcttcagctggagtgaggttaaaagaaggtagccatatcaatcgaagtcttcttacactgggaaaagttgttcggcaactcagtaagggaagaaatggccatatcccctacagagattcaaagctgactcgtatattacagtcttccttgggaggcaatgcaagaactgctattatctgcacaatgagccctgcacggagtcatattgagcaatccaggaatacactattgtttgctacttgtgcaaaggaggtagttacaaatgcacaggtcaatgtagtgatgtctgataaggcactcgtgaagcatctacaaagagaacttgaaagattacaaagtgagattaaatttccggcgccagcctcctgcactactcatgctgaagcattgagggagaaggatgcacaaattaaaaagctggagaaacagctaaaagaattgatggaagaaagagatactgtgaagtctcaacttgactgcttgcttaaaagcgattgtgatgaccatagtgacggccgcgttgcgaagcgatgggatgagcatagtcgatcctcagagtcttttgcacggaatgcgtctgaagaagcattttcagtttcagatacttctggtgttccttaccaggatcaagataatgctgtgtttaatggatcctatgtcttcagtgatgaccgtgatgatattgtattccctgttcaaacagtggatcttcctgaagaaacaaagcatgaaaaatttatgtcaccttggcaccctcccagccaccatagttcttctgattgcatagagtcatatcatatgacagaagcggcttccagaactgcatcagaagtctctgaagagcattgtagagaagtccaatgcatagatatacatgagcatagaagaagcacaagtcacaaattcgaccttttgctgccccaggacaccgagttccaaacacctgaattagagatctccaaagaagcagtccctcaacctgatgaagaccaagaacttgagagcataacaaacagaatggaagatcctaccaggatgtgccctgtcgaggaggagcaacaagatgagatcgtagatacatgtgaatctaatggtaccacagacaatgatgtcaagctatatacatgtgattctaacatttcttttgacattcagaaaccttaccctaatggatgtctgactgtaaaaaggtgtatactgagctccaaggatagggcgttgtctagaagtaaaagctgcagggctagctttatgattattccaaatagttggtttgatgattccgagtacaccagccagacaccacctaatgaaatcttgaagcataccccaagaaggtttgacaaggttaggagaagcttgtatccagaaaatgataacccttcttcagtagaccgttctgagttttctggtgaagtttcttctgatgaagtagtgaaggacatgagcaccattgatgaagtagccaaagacatgtgccccagcgacgcagaacaagaaactctcaccagtgacatcagttgtctcaccaagttgaagaagactgatagtgaccatgaggatgaacttgatgagtatcaggatcagtctattagagatggatctacaaccttgagaactgtcaaagatgttggcatagattcatcactgagtgcctctccttctcgttggcctattgattttgagaagatgcggcaagagattattcagttgtggcacgaatgcaacgctcccatcgtacacagaacttacttcttcctcctcttcaagggagatccagcagataacatctacatggaggtggagcacaggagactgtccttcattaggaggtccttcagtgccagccctgcaggaggcgagcttaattctgccgtcgtatcaagcctgaaaaatcttcgacgcgaaagggacatgctctacaagcagatgcttaagaagctcaccaatggggagaaagagcgcgtttacgctagatggggaatcgatctgagctcgaaacagcgaagattgcagctatctcgtctcgtctggacgcagaccgatatggaacacatcagggagagtgcatcccttgttgcgaagctgattgagctgctggagccagcacaggcactgaaggagatgtttggactgaacttcacactagctccccgatctgaacggcgatccttcggccttctaggtacctga</cdnaseq>

Protein Sequence

<aaseq>MGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWEC ISPTTVMFRSTVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIF AYGQTSSGKTYTMTGITEYSVLDIYDYIEKHPEREFILRFSAIEIYNEAVRDLLSHDT TPLRLLDDPEKGTTVEKLTEETLRDKDHLRNLLAVCEAQRQIGETALNETSSRSHQIL RLTIESSTRQYLGRGNSSTLVACVNFVDLAGSERASQTASAGVRLKEGSHINRSLLTL GKVVRQLSKGRNGHIPYRDSKLTRILQSSLGGNARTAIICTMSPARSHIEQSRNTLLF ATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQSEIKFPAPASCTTHAEALREKDAQ IKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKRWDEHSRSSESFARNASE EAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEETKHEKFMSPWHP PSHHSSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLLLPQDT EFQTPELEISKEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTD NDVKLYTCDSNISFDIQKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFD DSEYTSQTPPNEILKHTPRRFDKVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMST IDEVAKDMCPSDAEQETLTSDISCLTKLKKTDSDHEDELDEYQDQSIRDGSTTLRTVK DVGIDSSLSASPSRWPIDFEKMRQEIIQLWHECNAPIVHRTYFFLLFKGDPADNIYME VEHRRLSFIRRSFSASPAGGELNSAVVSSLKNLRRERDMLYKQMLKKLTNGEKERVYA RWGIDLSSKQRRLQLSRLVWTQTDMEHIRESASLVAKLIELLEPAQALKEMFGLNFTL APRSERRSFGLLGT</aaseq>

Gene Sequence

<dnaseqindica>6683..6989#6294..6592#2969..4021#2776..2892#2354..2687#2009..2133#1869..1934#1722..1789#1561..1642#1331..1444#1155..1255#963..1052#378..582#tggtccgtcgtcggaatacctccaaccccgcagtcggcggcgacgaccagaccacgcatttcttttctttttttcttttttctcgaggaggagcaggagcggctttgctgttgcatggtgtagtgtagccaagccacctgggcgggcctcgccggatcgccgtccacgtcccggcgaccggtgaccggccgctttcggccgcgggcaccaccaacctccctccctctctcccaaaatctttgcatctttcccgagtccgacacgtgaggacgattttcttgcaatgccgttgaattggtactagtagtataagagaggtgggggttttgatgctcatttcttgggtggattggggggagtgcaggtggggaggagatatgggggcggcggaggaggaggcggcggcggcatgggacaaggcggaggccaaggaggagaggataatggtgtcggtgcggctgcggccgctcaacggcagggaggccggcgacagctgcgactgggagtgcatcagccccaccaccgtcatgttccgcagcaccgtccccgagcgcgccatgttccccaccgcctacacctacggtacagtaccacctacatcctccttcacctcaattttgcaaatgggaatctcacattgttttggtcaatcaagtttcttggagtgtgtttagtccacgctaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttggaagtttatgtgtgtaggaaagttttgatgcgatggaaaagttggaagtttgaagaaaaagtttggaactaaacaaggcaccatgtagtactatgcattttgtagccatgtagtttggaaaagttttgatgtttgtagccatgtagtactatgcattttgtttggctggcagcctgtttgcttgaagaatgaatctcttctactttcttgttcctttcaaaaattttttacagatagggtgtttggtcctgattcctctacaaggcaggtctacgaggaaggagcgaaagaagttgctctatcagttgtcagtggaatcaactgtaagcaccgaagaaatgacgcaacttcgttgcattgtcgctttgagttttgtgaggtgatgtggggtaactaacatctgcacttgggttggttcttggcagcaagcatattcgcgtatgggcaaacaagcagtggcaagacttacacgatgaccgggataaccgagtatagtgttctcgacatctatgactacatcgaaaaggtgtgtgcaatgtgaacattgctttactttacctctgcgaaaatttatccgtctcattgtgtgccattgctacagcatcctgaaagagaattcattttgagattttcggcaatagagatatacaatgaagctgtgagggacctcctgagccacgacaccacacccctcagacttcttgatgatccggaggtacactcactgttctccttttactagcttgaacttactacataatctgtttgtgttttcctccaacctgtatactgttctcgagttgttcatgtttccatttgatttcaaaacagaaaggaactaccgtagagaaactcactgaggaaaccttgagggacaaggatcatcttaggaaccttcttgctgtgtgtgaaggtgtgggactgaacttgttggaaataagagaggcattggccttcaattttctttaattgcttaatctggtttgctacagctcaaaggcagattggagaaactgctttgaatgaaacgagttcaaggtcccatcaaatactcagattggtcagtggcacatcaatattttttttttgttttatgctactttttaggaaatgattttttgacagactgttaatttcagacaattgaaagttctactagacagtatttgggaagaggcaactcaagcacccttgtagcttgtgtggtatggaatatcatcctatattcaagactcgtttgtattgtgtgttccatgcactgagattcttttctgggcagaactttgttgacctagcaggaagcgagcgtgcatctcagactgcttcagctggagtgaggttaaaagaaggtagccatatcaatcgaagtcttcttacactgggaaaagttgttcggcaactcaggttcattttcctctcgcaagaacttgtaatctttagtggtttgccttctatccagaatatatgtttctaagtagtcaaggagtctctgcgcaccctttttcctctctctttcatattcactggatgaactaattttgaattccttttgcgcgtcgcaattcaactctttgattgcattattaccatccaatttagtctaagctatatgttcatgttgcagtaagggaagaaatggccatatcccctacagagattcaaagctgactcgtatattacagtcttccttgggaggcaatgcaagaactgctattatctgcacaatgagccctgcacggagtcatattgagcaatccaggaatacactattgtttgctacttgtgcaaaggaggtagttacaaatgcacaggtcaatgtagtgatgtctgataaggcactcgtgaagcatctacaaagagaacttgaaagattacaaagtgagattaaatttccggcgccagcctcctgcactactcatgctgaagcattgagggagaaggatgcacaaattaaaaaggtatttttttatcctatcatataagataccatgcttctgtatcttttgcaccttgtaactttatacccatttgtgtatgtgtgttcagctggagaaacagctaaaagaattgatggaagaaagagatactgtgaagtctcaacttgactgcttgcttaaaagcgattgtgatgaccatagtgacggccgcgttgcgaagcgatgggtatttgtttctttcatacttaatattagaactattgctctgtgcaaaacttaatgaactggctttcctctgataggatgagcatagtcgatcctcagagtcttttgcacggaatgcgtctgaagaagcattttcagtttcagatacttctggtgttccttaccaggatcaagataatgctgtgtttaatggatcctatgtcttcagtgatgaccgtgatgatattgtattccctgttcaaacagtggatcttcctgaagaaacaaagcatgaaaaatttatgtcaccttggcaccctcccagccaccatagttcttctgattgcatagagtcatatcatatgacagaagcggcttccagaactgcatcagaagtctctgaagagcattgtagagaagtccaatgcatagatatacatgagcatagaagaagcacaagtcacaaattcgaccttttgctgccccaggacaccgagttccaaacacctgaattagagatctccaaagaagcagtccctcaacctgatgaagaccaagaacttgagagcataacaaacagaatggaagatcctaccaggatgtgccctgtcgaggaggagcaacaagatgagatcgtagatacatgtgaatctaatggtaccacagacaatgatgtcaagctatatacatgtgattctaacatttcttttgacattcagaaaccttaccctaatggatgtctgactgtaaaaaggtgtatactgagctccaaggatagggcgttgtctagaagtaaaagctgcagggctagctttatgattattccaaatagttggtttgatgattccgagtacaccagccagacaccacctaatgaaatcttgaagcataccccaagaaggtttgacaaggttaggagaagcttgtatccagaaaatgataacccttcttcagtagaccgttctgagttttctggtgaagtttcttctgatgaagtagtgaaggacatgagcaccattgatgaagtagccaaagacatgtgccccagcgacgcagaacaagaaactctcaccagtgacatcagttgtctcaccaagttgaagaagactgatagtgaccatgaggatgaacttgatgagtatcaggatcaggtaatcatgtcaagaactgacctatgagctctttttattttttggcagtattttccttaaggagtcggtaaatactatttcctatagtacttcaatactaggtatccacatcatgctatactgttttccttttattttgattatggtaaggtttggtttttgactatctattaacttattaaagtagtagaaaaaggagcctccacgtttactctcatggtctagaaaatcccacattaatccaaataaaataagaaaaaggagaaaagagaatcatattaggattacaatatgtggaaacggacaataaaaacagataaaacccaaaggaaatgaggagtacgtgcaaacggacaaggattatttataaacaatatgaaacaccgattttggaaacggtaagagaaactaatcgtaaccatatatactcatgctgtcatgcatggccgtggcaggcaatttatttgtccattttctaattgtacaatagtacatgccatgctaataaatacattagagataattataagatgccactaatagtctaaagagtataaagatggaggaaggaaacaaacaaatataccagatgatccatcacgtctgctctatagacataggaattactactacttccgtttcaggtgataagactttctagcattgctcacattcatatagatattaatgaatctaggcacacatatatgtctagattcattaacatatatatgaatatgggcaatgctagaaagtcttataatatgaaacggaacaagtatattaattagaatatcgtacattagtcaatttggttcagcatggttacaatttaaacttttgttgtaatttcaatattttctacaacaaaatatgaaagaatatatgtcattatgtgaaaaaaaaattatagcgatgctaaccgtgcaattcgcatcggccaccatgtttactcttatgacctataaattctcacattaatcagaaaaaaatagagtccatacagaaatacttaaagtaagaaacattgaaagatgagattagagtccatacaagtatatagtttagaactaattaaaattcggaattaaaaattaggaaaattaaaagtagaagtcggagtccatatcaaaatacaatttacaaataactaaaattaaaaataagaaaagcaagattgggagaagagtataagtccatataggaatacaatttataaacaattgaaattcggaattaaaaaaataagaaatattagaaaaaattagagttcatataggaatacaatttataaataactaaaattcaaaattaaaaaaaatacataatattaaaaatgaagttagtgtccacatataaatacaattagaaataatggattgggaattagaaaaatagaaatattgaaagaaaagtctagagtacatatagttcctatagaactaattgaaagtcagaattagaaaaataagaaaaattaaaagtagagtttagattctatatagaaatacaatttagaacaacaaaactttgaaaattttaaaataagcaatgttgggagaagagtctagcgtccttatagaaatacaatttataaatatctgaaattcggaattaacaaataagaaatattgtaaaaatagtctagagtccatataggaataaaaactttaaataactgaaatttaaaaaataagaaatattggaagcaaatctagagtccatataggaatacaagttacaaaataacggaaattcaaaattgaaagaagagtttcgagtacatatagaaacacaatttacaaataactaaaattcagaattaagaaaaatgaatattggaagagaagtctatagtgcatatataggaataaaagaataaaatgtatgaataatgaaattcgaaataaaaaataaaaaaaaatgaaagttgagtctagagtccatataaaaatacaatcgataaataactaaaatttaaaaattagaaatatgaatatcatgcagttgttagtttgatgaagaatttaaaattatgttgccattttaatatatttaataaaatttgaatatatttaagctattatatgagaaaaaatatatgatgatgctagccgcgcaatctgcgcaggccactacgctagttataacatgaattgacagcacactagttcaaagattgcaactgttgttgcctatgcataatttgccagtctgttttggcctaccgatctgacttttattgtcttcgtgtattttatttgtgcagcagtctattagagatggatctacaaccttgagaactgtcaaagatgttggcatagattcatcactgagtgcctctccttctcgttggcctattgattttgagaagatgcggcaagagattattcagttgtggcacgaatgcaacgctcccatcgtacacagaacttacttcttcctcctcttcaagggagatccagcagataacatctacatggaggtggagcacaggagactgtccttcattaggaggtccttcagtgccagccctgcaggaggcgagcttaattctgccgtcgtatcaaggtacattgttacttgataggagtttaaaatcaacaacttggctttgcattgtccaggaaatctgaattccagcactcattctgttgacagcctgaaaaatcttcgacgcgaaagggacatgctctacaagcagatgcttaagaagctcaccaatggggagaaagagcgcgtttacgctagatggggaatcgatctgagctcgaaacagcgaagattgcagctatctcgtctcgtctggacgcagaccgatatggaacacatcagggagagtgcatcccttgttgcgaagctgattgagctgctggagccagcacaggcactgaaggagatgtttggactgaacttcacactagctccccgatctgaacggcgatccttcggccttctaggtacctgaaagaattgcacattgtgaccggcaaaacgatggcccatacgatgacaatgacaacatggaggtagaagaacacgtagtacaggaggttgacttgtttggagaggaattgctccccagcactgatttcactgaagcttctgatgcttcccttctttcatttgtgtgtgtgtgtggttggtttctgatgtataatcatcttacagatatgaaccaatcagccatattgcagctgttacatatgactatccttgtgtcagtttgtctggggaaaattcatcaataaaattcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0547500, RefSeq:Os08g0547500