Os08g0548200

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0548200| Description = Similar to ER lumen protein retaining receptor-like protein| Version = NM_001068968.1 GI:115477674 GeneID:4346239| L...")
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Gene Name

Os08g0548200

Description

Similar to ER lumen protein retaining receptor-like protein

Version

NM_001068968.1 GI:115477674 GeneID:4346239

Length

3774 bp

Definition

Oryza sativa Japonica Group Os08g0548200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27585236..27589009

Sequence Coding Region

27585390..27585612,27587139..27587338,27587752..27587892,27587977..27588057,27588600..27588724
,27588799..27588847

Expression

GEO Profiles:Os08g0548200

Genome Context

<gbrowseImage1> name=NC_008401:27585236..27589009 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27585236..27589009 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggggtcgaggaggccggtggccgtggtgctgagctgggtgcggaggcagccgcccaaggtcaaggcgttcctcgccgtggtcgccgggatggccgcgctcgtcttcatccgcttcatcgtccacgaccacgacaacctcttcgtcgccgccgaggccgcccacgcgctcggcctcggagtcctcatctacaagctcaccaaggagaagacctgcgccggactctcactcaagtctcaggatttaacagcactatttctggctgttaggctgtactgcagttttgttatggagtatgacatccataccatacttgatacagctacactagcagctactctctttgtcatctacatgattcggttcaaactgaggtcaacttatatgctggacaaggacaattttgcattgtactacgtggtgttaccttgtgctggcctagctctcctggttcatccttcaacatcgcataacatcatcaacaggatctcctgggctttctgtgtttatttggaagctgtttcagtgctgccacagttgcgtttgatgcaaaacacaaagattgtggaaccatttacagctcattatgtgtttgcattgggtgttgcaaggtttcttagctgcgcacactgggtccttcaggttttggatacccgtggtcgcttgttgactgctctgggctatggtctctggccttcgatggtgcttctctctgaaatcgttcagacgttcatccttgctgatttctgctactactatgtgaagagtgtttttggtgggcaacttgtccttcgacttccgtctggagtggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MRGSRRPVAVVLSWVRRQPPKVKAFLAVVAGMAALVFIRFIVHD HDNLFVAAEAAHALGLGVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSFVMEYDI HTILDTATLAATLFVIYMIRFKLRSTYMLDKDNFALYYVVLPCAGLALLVHPSTSHNI INRISWAFCVYLEAVSVLPQLRLMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD TRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV</aaseq>

Gene Sequence

<dnaseqindica>155..377#1904..2103#2517..2657#2742..2822#3365..3489#3564..3612#aactagaacccccacgcactcacgcgcactgcacgccgcaacacaacgcgctcgcctcgcctcgccccgatcggtggtggtgctcgccgtcgccgggcggcgctagggtggccggagaggctccggagagtaggaggaggaggaggagccggagatgagggggtcgaggaggccggtggccgtggtgctgagctgggtgcggaggcagccgcccaaggtcaaggcgttcctcgccgtggtcgccgggatggccgcgctcgtcttcatccgcttcatcgtccacgaccacgacaacctcttcgtcgccgccgaggccgcccacgcgctcggcctcggagtcctcatctacaagctcaccaaggagaagacctgcgccggtaaaaatcctccccccttcttccctcccgacgtcatcccctcgatccacacaactccctggattccaccccctccggatccctattttttagaaataattttgtgacttgttttgcgtttgtgtgttggatgtgtttccgctccgataagattatttattacgcaccttatttactgctaatttcctcactgttcgcgtggaggtatttaattttttttatatattttcgacttgatttgtttacggagatgggtaatttgggttatatttagcgagagccgagagaggtttggaatttactgttttgtttccacactttaatactgcctgcaacttgtgctgacttgtatattgctatgttagtggtaagtttacactatatgttcacactgaggttggcatggtgagattgtcatgtggtgatattgctgggtgattctaaactcaaattgaggaagcagctttttgcttgttcaatccaatcaccttgctcggtcgcaattcttactgcatctgtgtatgcaactacaggttttctagtaatgaggtggacattctatatgtagatgtgttgtagggtagcactagcagagtttgttttgagcagtactggtctgtcaggtagctgattgaagtgtttgttggagggagtatgtcatctcctggtggacggcgcatagattatggtgtttagattggtggtgctgcttcagtccctactagaacgcctttctctgtcatggaacttgttgttttccatctcctttcgtgctttactttctgaaaacatattatgtctgagtgcttggttgtgcaaatgaagaatttagaagggggtataaagatggtgattctgacattaaaatattaggcaattaacttaccaagatatggtccatctcataattccattgctttccaaaagcataattgcttggaatttatgattgctctgtggcaacttggttgttcttgcttcttgagtggaaagagaatagcaaaatcccaattggtctattgtattctaagtttttaaccgaactggttttcactacatcagtacagctgtttatctgcatgcattagcaagctgtaaaatcacttgtttgaaagtggaaattgtatggtaatcaggtaatttttttagatagtggatgctgcattcacttcccagtttttattgaggatagaccaattattttatttaatatgcatcaaaatgaattaactgcatgcagtttaaggacttctgtaatgttggtgttttcgttaatgaaaacggaggtgcctccctttctcaaaaaataaaataagatgaattaactgcttgaatgacagggagtagactggtatagaatcgcatgttgaaaattacaattgcaagatgaatttcctctcacccctcataccccctcccccaactctgggacctttttaattgtcccttttgttactctcttcatttaattcctacatttatgtaactcatgctctaatttgtttaaaccttctaaattactgcaggactctcactcaagtctcaggatttaacagcactatttctggctgttaggctgtactgcagttttgttatggagtatgacatccataccatacttgatacagctacactagcagctactctctttgtcatctacatgattcggttcaaactgaggtcaacttatatgctggacaaggacaattttgcattgtactacgtggtaagtgcaatatcagcttctagagtctagactaaaaaactcttcgaatctattaaacataaagtttgtggtgccctctgttttgtgtaaactttctgacttcattgtgtgaactataactgttggagctgctcaaaacacaaattctataaatgttcccctgcttgatctagactaaagacatagttcaagcacttgaaatttccaggttcccaccgccaagatcataacctgcttgtatattgcagttgcatgtgtttactagtattcattaccaatgcaatgatctgtacacctattctgggtgctaactattttttgccagacatgcttatgtacttgttttgatcattcatcttgttagcccccttcttattgctagacatgctatcttactagacgttacattccaggtgttaccttgtgctggcctagctctcctggttcatccttcaacatcgcataacatcatcaacaggatctcctgggctttctgtgtttatttggaagctgtttcagtgctgccacagttgcgtttgatgcaaaacacaaaggtaaatcttaaagatacatacatatgatcttcaatgcacagtccagtggctgaatttcttactttgtttctttttggggtgcagattgtggaaccatttacagctcattatgtgtttgcattgggtgttgcaaggtttcttagctgcgcacactgggtccttcaggttcttttctcagcctccttcctccttaagtgttgttgtagttttgaaatttggaccatagaaccaatgcaaatggtgttcagaccagttacagtatgtaacattaacatgggaggttgagagctgacactccagactcctcagatcgaccaaacaggggggaaaagcgaaatgtgcagttagaaaaataaacaacgcctctgattgcttgttctagtttattacgcaggagtatctagactctcactgcaatgcagctagtagattttctggaagcaatgcggaacttaacatctttgaattgatatgtatttcctgttgtatcatcgtcattcatgcttattcctgatgcatcatatcatagggaatacactgttctactccgttgcatattggatgtaaatgtctgcattttaagctgtatatattcttgagaaatctgttacttctgatgcatgattagtagtgatctaatctgtaaacagaataggattttttttagcaagcccatctaaatcaatttgctgtgatctaatctgcaggttttggatacccgtggtcgcttgttgactgctctgggctatggtctctggccttcgatggtgcttctctctgaaatcgttcagacgttcatccttgctgatttctgctactactatgtgaagaggtacataaatctaccttttaccgtcatcaaggcaaaattgtgaagattggctaaccagtgatcttttgctgcagtgtttttggtgggcaacttgtccttcgacttccgtctggagtggtgtaaaaatgcagcaggatgcaacatgttatgggctttgtgcacgtttagtacatcgtcggataccagagccttgtttgcttgataatttttttcagttacaaattgctcatgtgaaaaatgtacctaccagagaccgtgatgaaatctagagactagtttttaact</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0548200, RefSeq:Os08g0548200