Os08g0549100

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0549100| Description = Similar to Peroxisome type ascorbate peroxidase| Version = NM_001068974.1 GI:115477686 GeneID:4346247| Length = 3979...")
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Gene Name

Os08g0549100

Description

Similar to Peroxisome type ascorbate peroxidase

Version

NM_001068974.1 GI:115477686 GeneID:4346247

Length

3979 bp

Definition

Oryza sativa Japonica Group Os08g0549100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27643339..27647317

Sequence Coding Region

27643575..27643781,27644123..27644225,27644321..27644400,27644492..27644574,27645146..27645194
,27645275..27645340,27645501..27645550,27646009..27646133,27647089..27647201

Expression

GEO Profiles:Os08g0549100

Genome Context

<gbrowseImage1> name=NC_008401:27643339..27647317 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27643339..27647317 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgagcctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctgggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttcttgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT YDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVA VEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGH TLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYV DLYARDEDTFFKDYAESHKKLSELGFTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAA VVIVSYLYEASKKSK</aaseq>

Gene Sequence

<dnaseqindica>3537..3743#3093..3195#2918..2997#2744..2826#2124..2172#1978..2043#1768..1817#1185..1309#117..229#agtgagtactagtcacaccacacgcttggcttgacgccgcacgcctccgctccgctccgccgccgcggccgatctctctagggcttccaacctcgccggcgacgcgacgccacgccatggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcgtacgtacctaccggcctaccccccatctcctgctcctcctagaaccctcccctagttcctaatccttgtgatggattcgcgcggcggtggcgagggagggagctctcgtgtgtttggatttggagcccgctcggctctgcttgcctcgagtggtgggatgagttactgctggtggtggtgagatgggtcgcttgcgattgcgagactgtatgattgggtttggttagttgcttgcggcgggtacctgcgctggtccgtggcgtggctgttgggcgaggcaattcgacgaacaccttgagtgcgtgcgcgcctgctttggatggctcccagatttggttttgattgtgtgactgcgcctttggaattaacgaggaacggcggacgatgtttagttcgctagttcacatgtagagtgcacgcgtttttctgttgatccgttggttctctcatactagtcaggaaactagcaacctagcaggggagagcgagcatttttaatcactccccatattccgtcataacggcaatatcgcaggaagctaagacgaatttcttatttctgtctatagtaggtgttccactccatgagcttcgtgttacatttgtggagctgatgagagaccagtgttacaaactggaacaaataagtgatgtttcattatctaaaaaaaggggatgtttgcactactgctgcaaatgttctatgtatattgtaattacgaatggactcagaagaagcattaccatttaacgcaccattacagatagtgcagcgtgtatttgctaattaattagtactttatatatggaattgtgattttttttatcttatatgttgtatacagtgttcttctgtaatgtactatgagtttttctcatttatcatggaggatattctgcgtgctcttggattactcttggactaaaacttagttcctgtgcactcccttgcagatggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcggtatgtattgtttgtccccaatgtgttcctagatgattagacgaaagtagctttcacttttcccccattgtcagaatggctctagttccctttaaaccactcatcagctatatgattgatgcctcttaagaaatcaatttgagttttcttgtcagtttctcaaaattcttttctttttctattgttttgggttttaccttgatcggactacaaactaactcttttttttctctaattcggggatcaaatattttgggagaaataactaaaaaacaagaaactcccatatttttgcaactattctcaatggtgttgcagtactcaccactcttctctgtacaattgcattatttacctgttccacgttatctagtttattgttatattgtcactttattcagtgatgaaataaatcgaatgattacttatgcttctccaattgtcttttactgtaacagagcctattaaagccaagagccctaagatcacatatgctgacctttatcaggtaaattagcgttgcttgaattggttcttgtgctgccaacttattataagagtgccttgatactgtgacatcttttttttttcttgtcgcacatttgatcttttttatcttatcgattactgtgtaaatttttaagatcctaactagatttttcttacagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgtacgtgaaataacatttctttatgaatggatgcatcttttattgattcacacttattaagttcttttgacctgaatcaggattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtaattgccacaaactattctttgaactggtctaccttttcttttgtcattataatcatgcttcctgactcctagtgtttgaagcaatgagtcaaaatatgtgttagtattctacatgtatcacatttagtcccatgcatttctcctgtacttgtctgctagtactcatgttctggcatttagtacttagtgttgcttgagacaacccagttcatgcaatacataccgtaatatgtacattatcttaaacacacatacatctcttcatagatgggagcctcgtctttcatttatcttatattcctgcatatctggtatagttgtcatttaggtgtcataccagcaggtgctgttgtatgtctggtaatttgttttatgttatttatctgttttcctattccttctgccgaagtctgttttcctttcttacatttactgggatgcaaggtgccagttcctattttagtattttaataactggtgccagaatcctgttttgatatgtataatcgtaatcatatatctatttttatgggggtatatctgcattttatctttgtttcatgagcaggtgcactgcacttgagggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcacactctggtaaatgctctaattaatgtagaatttgtgtaatggtaatcctgattcttcatgagaagcacagttttaacaactcgctttatacttcaagggaagggcacatcctgaaaggtctggatttgaaggcgcatggactcaggagcctctgaagtttgacaattcgtactttctgtaagttgaatacaaaactgggtcatttacgtactaattctgggcactagatttgaggttagaagataacagtgtaatattttatttaactgcagtgagctactgaagggggaatctgaggggcttctgaagctcccaactgacaaggcattgttggaagatccttcatttagacgctatgtggatctttatgccagggtaaaaaggatcttttatatatatattttttttctattccttgcacttaaaactcccccattttatatgccctttcatccattttttaggactataggaccattaacaaactataaagtatttgaatttgttagttgaaaatgcaattaatagatttatttattgtcaaatatgatttcggagcattatatttttacaacttttactgctatataattggaagtgaataattttcaaaatgctacaagaactgtgaatatttcatgccgacgtactatgccttgcggtgctccataatataagttttacattcagaaccatttcttctgttcatatggcaggatgaagacaccttcttcaaggactacgctgaatcgcacaagaagctttctgaacttggcttcactccacggagcagcggccctgcatctacgaaatctgatctttcaactggtgctgtactcgcacagagtgctgtcggggtagctgttgctgcagctgtagttatcgtgagctacctatacgaggcttctaagaagagcaagtaagattgctatgttcttcatcagcatggcctcatagtaagtatcagggtcaaataacagaattctagtgatgatccagccatacgaacacttccttcatgtctacatataccctatcaatatttcatggggaattatatggagatgacatagcttcactatttaaaagcactttggacatatattattccgtcttctgtgtgctctctaatatctacaagaacagtggtttgtgtcct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0549100, RefSeq:Os08g0549100