BGIOSGA003613

From RiceWiki
Revision as of 18:24, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003613

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003613, complete gene.

LocusTag

OsI_02124

Ensembl Transcript ID

BGIOSGA003613-TA

Ensembl Protein ID

BGIOSGA003613-PA

Length

8430

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19618121..19626550

Sequence Coding Region

19618121..19618391,19619262..19619320,19622616..19622691,19622812..19622883,19623012..19623099
,19623524..19623764,19625205..19625320,19625548..19625765,19625955..19625986
,19626083..19626185,19626276..19626550

Genome Context

<gbrowseImage1> name=IndicaChromosome01:19618121..19626550 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:19618121..19626550 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCACCGCCTCGTCGTTGTGCTTCTGCTGGCCTTATTAGTGGCTGGAGCCGCGCGCGCGGCGGAGCAAGCTGCGGGCGAAGACGGCATTCGCGGCGGCGCCGGCGCCGATCATCAGGAGGCGGCCGGGATCACGGGCGGGCTGAGCCGGCGGAGCTTCCCGGCGGGGTTCGTGTTCGGGACGGCGGCGTCGGCGTACCAGGTGGAGGGCATGGCGCTCAAGGATGGCCGCGGCCCTAGCATTTGGGACGCCTTCGTCAAGACTCCCGGTGAAATAGCAAATAATGCAACGGCAGATGTTACTGTTGATGAGTACCATCGCTACAAGGAGGACGTAAACATCATGAAAAGTATGGGTTTCGATGCGTACCGCTTCTCAATCTCATGGTCAAGAATATTCCCAACTGGAACTGGGAAAGTAAATTGGAAAGGTGTGGCATACTATAACAGATTGATAAACTATATGCTGAAGATAGGCATTACACCTTATGCCAATTTGTATCACTATGACTTACCAGAGGCACTAGAGGTGCAATATGGAGGACTGTTGAACAGAAAAATAGTGGAAGCATTCGCAGACTACGCTGAGTTTTGCTTCAAGACATTTGGCGACAGAGTGAAGAACTGGATGACATTTAACGAACCGAGAGTTGTTGCCGCTCTAGGATACGATGATGGAAATTTTGCTCCAGGAAGGTGCACAAAATGCACGGCTGGAAACTCTGCCACCGAGCCTTACATTGTTGCCCATCACCTCATTCTTTCCCATGCTTCTGCTGTTCAGAGATACCGGCACAAGTATCAGCATATACAAAAGGGGAAGATTGGAATTCTTCTGGATTTTGTCTGGTATGAAGGTCTTACCAATTCAACGGCAGACCAAGCTGCGGCTCAAAGATCAAGAGACTTCCACGTTGGATGGTTTCTTCACCCAATCATCTATGGTGAATACCCTAAATCGCTGCAAGTGATTGTCAAAGAACGGCTTCCGAAGTTCACGGCCGATGAGGTCCACATGGTGAAGGGATCAATCGACTATGTTGGCATTAATCAGTATACTGCTTATTATGTCCGTGATCAGCAGCCGAACGCCACGACTCTCCCTAGTTACTCGTCTGACTGGCATGCTGCACCTATTTATGAACGCGATGGCGTGCCAATTGGACCAAGGGCGAATTCTGACTGGCTTTACATTGTACCGTGGGGTTTGTACAAAGCTGTCACCTATGTCAAGGAGAAGTATGGTAACCCCACAATGTTTCTATCTGAAAATGGCATGGATGATCCTGGCAATGTGACCATTGCTCAGGGGGTGCATGACACCACGAGGGTCGCCTACTACAGGAGCTACATCACCAAGCTGAAGGAGGCGATCGACGACGGCGCCAACTGCATAGGCTACTTCGCCTGGTCCCTGCTGGATAACTTCGAGTGGAAGCTCGGGTACACGTCGAGGTTCGGCCTGGTGTACGTGGATTTCAGGACCCTCAGGAGGTACCCCAAGATGTCGGCCTACTGGTTCAGGGACCTTGTCCGCAGCAAAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGHRLVVVLLLALLVAGAARAAEQAAGEDGIRGGAGADHQEAAGITGGLSRRSFPAGFVFGTAASAYQVEGMALKDGRGPSIWDAFVKTPGEIANNATADVTVDEYHRYKEDVNIMKSMGFDAYRFSISWSRIFPTGTGKVNWKGVAYYNRLINYMLKIGITPYANLYHYDLPEALEVQYGGLLNRKIVEAFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDDGNFAPGRCTKCTAGNSATEPYIVAHHLILSHASAVQRYRHKYQHIQKGKIGILLDFVWYEGLTNSTADQAAAQRSRDFHVGWFLHPIIYGEYPKSLQVIVKERLPKFTADEVHMVKGSIDYVGINQYTAYYVRDQQPNATTLPSYSSDWHAAPIYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTIAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKMSAYWFRDLVRSKN</aaseq>

Gene Sequence

<dnaseqindica>1..271#1142..1200#4496..4571#4692..4763#4892..4979#5404..5644#7085..7200#7428..7645#7835..7866#7963..8065#8156..8430#ATGGGCCACCGCCTCGTCGTTGTGCTTCTGCTGGCCTTATTAGTGGCTGGAGCCGCGCGCGCGGCGGAGCAAGCTGCGGGCGAAGACGGCATTCGCGGCGGCGCCGGCGCCGATCATCAGGAGGCGGCCGGGATCACGGGCGGGCTGAGCCGGCGGAGCTTCCCGGCGGGGTTCGTGTTCGGGACGGCGGCGTCGGCGTACCAGGTGGAGGGCATGGCGCTCAAGGATGGCCGCGGCCCTAGCATTTGGGACGCCTTCGTCAAGACTCCCGGTGAGCAAATTAAGAAACCGTTCATTTTGATGCTATTTTTATCAAAAAAAAAAATCTATATTTACTTTGTTGGTAAATTTGGTTAATACATGAGAAATTCTGCTAAAATTTTGATAACGTTAATATCTTGCTAAAATTTTGGCATTCAAAATAAACAAGCTCTAAACGAGCTCTAAACAAGCTCTAAGCTGCATATATGCAGGAGCCCCCTACGTTAAATTTAGGATCATCTTCACTTCACTCACAAGGATATATGTACAGTGGCAACAGTTCTGTTATCAAAACTGATTACAGAGCTTAGAACAAACAAGTTAAAAACTCCCTCCGTTTATATTATTTTTATATTATAAGTTATTTTAAATTTGTTGAAGGCAAATCTATTCTAGTTTAACCAAACTTATATAAAAAAAATATATCGATATTTTCAACACATGGTAAATATACTATAAACATATTCCACAATGAATATAATAAAACTAATTTGGTGTTATAGACGTTGCTATCTTTTTATAAAATTAATCATATTTGAAAAGAGATTTGACTTACAAGGGACTTATAAAGCTGTAATATGAAACAAAGGGAACGGAACGTGTGGTTCTTTTAAAATAAAAGGTGTAGAAGGCATATAACACTGGTATTATGACATTTCTGCCCTATAAATAGGACAGACTGAACCGTATTGAATTACCCTTAAGTACATGAATCATGCTTAGTGTTAGAACACGTATAACATTTCTTTTTGTTCAGAAAAAGGGAGAACGATCGAAGAACAACAGAGCAAAGAGCGCCTCTAATCCTCTATACGTGTACATGCGACCTTGTGAGTCGTGGTGTAAAGACTGACTAGAGTTTGCTTATTTTTCTGACCAGGTGAAATAGCAAATAATGCAACGGCAGATGTTACTGTTGATGAGTACCATCGCTACAAGGTAAAATGCTTACCTCCAGTCACAAAAGAATAATGTTATGGTATCCGGGCGGTCAAGAAAAGTTAATTTTAACAACGAAGTATTGTTTAAAGCCAAGTGCGTCGTAACAAAAACTTTCAAATTAGTTATCACACCTTTATAACTTTTTTTTTTCTTATTTATGCAAAAGAGTTAAATAGTCAAAGTTGTACCTAGCTTGTTGACTTTGAAAAGTCCAAAACATCATTCCTATTTTATACTCCTTTCGCCCCATTTTAAATGCAGCATGAGTTTTCGTGTCTAACTTTTATCGTCCGTCTTATTTAAAAAAAATTATGATTAATATTTTTATTATTATCAGATGATGAAACATGAATAGTGCTTTGCGTGATTTATGTTTTTTATTTCTTTTCAAAAAAAATTTCAAATAAAACAAACGGTTAAAGTTGGATTCGGAAACTCATGGCTGCGCTTAAAATGAGACGGAGGGAACAATAGGGTTCATTCCCAAGACTAGCTTCTTGAGATTGTACAATAATTTGGGCTTCTTTTTTAAGCTTCTGGCTTTTGGAACAAGCTGAAGAAGCTAGGGGGGCTGGCAATGGAGGATTTCAAACTACAAATGTGTCGGAGAATGAACTCCTCCACCAGGGAACCGTAAGGCCCCCCATTGTGAGTTCGGCCGGGGGCAGCGGGTGAGATTCGAGGGCTTGGTGAGCGGAGCTGTGTGATCCTGAAGGAGTTAGGCCCCTCCAAGACGATGAGACAAAAGAGGTTTATACAGGTTCGGGCCGCTAAGAAGCGTAATACCCTACTCTTGTGCATGATTGATTGAATGTAGAACACAAGTGCTTGGGGTTGCGAGACCCAAGCGCCAGTTTGCTCGGAAGTCCCCCCCCCAACTAGGCCTGGACCTCCTTTTATACCTCAAGGGGTTACCACATGGGCCCAACAACCTAACCTAGCTCCGGTGGAGAAGTATTATAATCTTTGCATTAAATGCATGTCTTGTCTCTTGACTTGGGAAGCCAAGCACACGTCGTCTTGATGATGGGGCCTGTCAAATCTTGCCACCTGACACGGGGGGTTGCCCCTGTCAGTCACCATTTAATGGGTGAAGACTTCTGGGCTCCAATTACACCGGGAAACAGGAGCCTTGCTTTGACCAGAGCGGGAGGACCGACTCTGGCTGGGATAAGAGGATGTGAACCTCTCACCATCACTATTTGATGGGACATGTCAGGCTGCACGCCGCCTGACACACGAGCAGCGCACAGGCGCACTAGCCAGTCCCATCGGTCATTCGACTGGTCACAGACCGGTTGAGTGCACTGCACGCCGCACCGCTCGGGACGCCATAAATGCGGGTAGGTGGGCATCTGGAGGCGGACACCTAACCTATCATACGTGGTGACCTAGATAGGGGGTCGGGGGAGCCCGACCCCTAGTCACGGGAGGGGGCGGCCGCCGCCCGACCTCGGGCCCGATCCCCCCTTAGGGGGGAGCCACGTGACGCCTGGGGCGGCCTTCTCCCTCTAGTCTCAGCCAGGGAGTGGCCGCCGCCCTACCTCGAGCCTGACCCCCCTCGGGGGAGGGCCACGTGGCATTGGAGGGCAGCCTCCTCCATCCAGTCTCTAGGAAGGAGTGGCCGCCGTCCTACCTCGGGCCTGACTCCCCTCGGGGGAGGGCCACGTGGCATCGGGGGGCAGCCTCCTCCGACTAGTCTTTGGGGAAGGAGTGGCCGCCACCCCACCTCGGGCCTGACTCCCCTCGGGGGAGGGCCACGTGGCATCGGGGGGCAGCCTCCTCCCTCTAAACCTGATACCCCCGGGCCCATATCACCGACAAATACATTTCTTGCTCTTGATATTTTTGTGGGTGTTCTATCTTTTTTTGTAATGGACTACTTCATAGTGATCAAAAGAATCTCTTGTGAAGAGTACGGTATCCTGGATGGCAAGGTAGAAGGGCTACACACACGTCATGATTTCAACAATAACAGATTCGTACCATTCAGGGAAAAGTAAAAACAGATAGCTGAAAACACCACAGTATACACGTTTTCCTTTGAGATGACGTGCAACTTATTTTCTGTTTCTATGATTCTCTTTATGATTCTAACCGCTCTAAATGTTTTATGATTATTTTTCACAATAAACATTCAACCACATTGTTTTCCAAAAGAAAGTTCAATCTCACCTATATTCCATAGTATTAAGCATACATCATATATACACCGTACCTTTTTCATCATGGTGAGAAATTATAGTATTATCTGGCTTATTTGACATTTCATAAATTTGGTATGCGACTTTTGTTTCATGCTTGAAATTTCTCTTATACTAAGGTTTGAAAGGCTTGTTTTAATTATGAACATATTCAACTTTTGCATGATTTGCTAGAAGAACAACGCAAAGTCAAACTGAACCGAAACTTATCTTGTATAAATCAAACATCAATTGTAGATTTGGAAATTTTGGTCTGTTGTCATGCTGATTGTACATTTAGGAACATAATCTTATGCTTTTCCTTATATAAGGTTTGCTTATCACTACACTACCCCTTGCACTTAGTACACTACGACAAAACAAGCAATCGCTGGCGGTCAATTTCATTTTTCGCAAGAGATTAGAGCAACCACTAGTAACGATAAATTTTCACTACTGGCTGCACAAACCGCACGTGAATTGAATTTTACATGCTGGTCTCTTAAGTAGAACACCTATGAAAAATCGATTTTCACATGTGACCATGTTAAGAAGACCGCCTGCTATGATTATTTTAGGCGAAAAATCATAAAAGTTTTAGAAAATAGGCACCTGGAGCCGCTGTCGGAGCCGCCCCTCAACTGCTTCCGTCGCCACCACCCGCTGACCAGATCGAGTAGAGGGAGGTGAGTGGGAGAGACATTACTGTTGTCCCCTCTACTGTCGTTGCTGTTATTTAATAGCATTCCTGCTCTTTTGCATACGGTTTTTTTAATTTTCACATGCGTGTTATAAAGAGTATTGTCAGCGAAAATAAGGGTATTTTTCATGGCAGTCGTTTCTAAACCCCGCCTTTTAAAAGTCAACTTTTACTAGCGGGGTTAAATCTTCAGACCTCTCATTATTTTTAGAAGTGAAATTCTTTAGATCCAACTGAAAAAATGAAACCAATGTGTCCGGAAAAATCGTTTTTTAGAAGTGGTACCTAATAATTGGTCTATCAGACAAGCATGGAATTTATTCATTCGCTTGTACTCCTGATTCCGGGAACTACAGAATAAAACAGATGACCTGAGAGCAGAGAATTAAACTTGGCTTTGCTCTTGCAGGAGGACGTAAACATCATGAAAAGTATGGGTTTCGATGCGTACCGCTTCTCAATCTCATGGTCAAGAATATTCCCAAGTAAGCTCCCTTAAGTTGCTCGTCTTAATCTACGAGTACAATTTTATTATTTTGGACTTCATTTCTGAAAGTGATGCAAACTAACTTATATTTCTCTTGGATGGGTGTTCACTGTCCTAGCTGGAACTGGGAAAGTAAATTGGAAAGGTGTGGCATACTATAACAGATTGATAAACTATATGCTGAAGATAGGTATGCCACGTACTGTTAATGTTTCATTTGATATTCACCCGCAAAAAAATAAAAATGAAAATGAAAATCATCTGATACGTGGCACATGTTTCAACTCTAAAGCTGAACGTTGCTCTGCTGCTTAACAGGCATTACACCTTATGCCAATTTGTATCACTATGACTTACCAGAGGCACTAGAGGTGCAATATGGAGGACTGTTGAACAGAAAAATAGTGTAAGTATTGCTTTGTTAGACTAAGGTTGATCCAAATACTTATACATTGACATGTGACTGTTCTCTTCTCAAGCTATGCAGCAGTACGTTCGTTTTTCTGAACAATTTTTAGATACTCATTGGAACCAACGGGATAGTTCACCATAATTCTTTTTATCAATATTTGAATTTTATAGAAAAATGAAGTTACTATCATCGGAATTGCAGATCCTTGTGGTATATATTCATACTAGCAAAAGATCAGATACAACTGCCGCTCAAAATCCTGCAAAGTACAGGAGTTCCAATGGCAACTCTCAATAATTTTTTTCTCATACATTGTTTTTTTAACAATCACCATGCAGCAGCAGATTGTGCATTCCTGAAACTGTAGATCAAGATGATCCAATATATGTATCTACTGGTTTGTTTTTGAATCACGCAGGGAAGCATTCGCAGACTACGCTGAGTTTTGCTTCAAGACATTTGGCGACAGAGTGAAGAACTGGATGACATTTAACGAACCGAGAGTTGTTGCCGCTCTAGGATACGATGATGGAAATTTTGCTCCAGGAAGGTGCACAAAATGCACGGCTGGAAACTCTGCCACCGAGCCTTACATTGTTGCCCATCACCTCATTCTTTCCCATGCTTCTGCTGTTCAGAGATACCGGCACAAGTATCAGGTAAAAACAGTCACCGGTTTGTGGTCTTTTTATGGGTGATTTTAAAAAAATTATGAGAAAACAAGTGACCATTTTGTTAGCTCTTTATATATGTAAAAGTGTACCACTAGAGATATAAAACTAGGGTTAATTGGATCCATACCATTACAAATATGCCATATTAGAAAAATGTTATTACTATTTACAATTTTAGTTAGGTGTAACTAAAATTTTATAAAATTAAAATCATACTACTACCGTTATGTTTGTTGTCATGTTCTTTTCTTTCCTCCATCTTCTTCCTTCCCTTCTTTTCTTGTCCTCCTCAGCGAGCTTTAGGGACAGGGAGGCCGCCCACTCTCACGCTCGGCGAGGATGGACCGTGTGTGCTCCCCAGCCGCGTGCTCGATGAGGATGACTAGGGAATGTGGGTGGTGGGAGGACAGAAGAGGAGAGGGTGGAGGCAGGGCTGGCTCTACAATTTTGAGGGCCCTAGGGCAAACTTGACAACATGATCCTTAACCATCAATCTCTCCCCTATAGAGAGATGTGTTATATGTATATTCACATTTTTAGCGTTGTTCAGATTGATGTCATTTCAAGCCATATCAGTTTTTTGGTAAAGTTATTAAAGATGTATTCATTTAGTTTTTACCAAACTATAGTAAATACATAAGAAATCCCGTCAAAACTTAGCAATATTGCTAAATTGCTAAAATTTGGTAAGATTTATTTTGGCTACAATCTGAACAACTCCTTCATTTTTAAAGTGTGTTTTCAAATCTAATCTTAGAGAGAAATAAGCATTCATAACATTTCATATATATATATATATATATTCTTAGAAATAGAAAAATATCAACACTTAAACTGATCTTGTTTATTTTTCCCATTTACTTAGCACCATAAAAATGCTTCTTAAGTAAAATTACAACTTTTCAGCACCTAAAATTATAAAGAAAATATATATTATCAACAAGAATCTATCTATACATACAATTTTGATTGTTGAATCTAGAACCTTTATTAATTCACTAATTAGTATTATGTAGATAACAAGGAGTAGTAGATAGTACGGAATTATTCACTAATCTTAAATACCACTTTGGCTCATATAGTACTCATACATATTTAGGCATAGGCCCCTAGCCAGGACGGGGCCCTAGGCCGTCGCCCTCTTTGCCCCGCCCAAGAGTCAGGCCTGGGTGGTGGAAGAAGATAGAACTGACATGTGGGTTTCACGTGTAAGGGTATTTTGGTCTATGTGATGACATAATACGTGATGATGATGGCATGGTTTTAATTTTATAGAACTTCGGTAGCACCCAGCTGATATCACAAATAATAATGACATTTTTCTGATATAGCGCATTTATAGTGACATGGATCCAGTTAGCCCATAAAACAAATAGTAGCATGAAATTCAGAAATAGTCCTAAAAATGCTTAACAAACTTTTCAGCATATACAAAAGGGGAAGATTGGAATTCTTCTGGATTTTGTCTGGTATGAAGGTCTTACCAATTCAACGGCAGACCAAGCTGCGGCTCAAAGATCAAGAGACTTCCACGTTGGATGGTATTTTTGCTTCAAATTCATTTCTGCTTCTTCTTAACCTTTTTCTTATTTTCTTTATTCAAGCCAAGAATCCGCAAACTGCCGGAGTATGTTGCTCCTAGATGGCAAGATATTAAGGCTGTTTAGACTTTATAACTGATGAGATATATACAGATCACACCACGTTACACAACAAAAATACAAAATCCCTACGCACATATCTGAAACAAGTTGCTTGACCTTTGTAGGTTTCTTCACCCAATCATCTATGGTGAATACCCTAAATCGCTGCAAGTGATTGTCAAAGAACGGCTTCCGAAGTTCACGGCCGATGAGGTCCACATGGTGAAGGGATCAATCGACTATGTTGGCATTAATCAGTATACTGCTTATTATGTCCGTGATCAGCAGCCGAACGCCACGACTCTCCCTAGTTACTCGTCTGACTGGCATGCTGCACCTATTTGTGAGTCATCTCTTCAACTTAACTTAACTACCTAATTCTCTCAAAAAAAAAAAACTTAACTACCTAATAAACTGTTATGCTTCAGTGGTCCCCAAGACTGAAAATTAAGGGTTTGGTCTCTAAATAATGAAAGTTACATTGTGATGACAATTAATTTCCTGATATCCTTTGCCTCTCTTGGTGCTGCAGATGAACGCGATGGCGTGCCAATTGGACCAAGGGTACGCCATCTGTTGGTTATTTCTACCGCTGATACGAATCATATATCGATTAGTACTTCAGTTGTGTGCATCGCTGAAAACCATTTGGTCTTGTAGGCGAATTCTGACTGGCTTTACATTGTACCGTGGGGTTTGTACAAAGCTGTCACCTATGTCAAGGAGAAGTATGGTAACCCCACAATGTTTCTATCTGAAAATGGTACATCTTTTTTCCTTGTAACTTCCTTTTTCATTCACATTGTTTTGTGATCACTAAGAACAGCACAACAAAACATAATTTGGTTTTCAGGCATGGATGATCCTGGCAATGTGACCATTGCTCAGGGGGTGCATGACACCACGAGGGTCGCCTACTACAGGAGCTACATCACCAAGCTGAAGGAGGCGATCGACGACGGCGCCAACTGCATAGGCTACTTCGCCTGGTCCCTGCTGGATAACTTCGAGTGGAAGCTCGGGTACACGTCGAGGTTCGGCCTGGTGTACGTGGATTTCAGGACCCTCAGGAGGTACCCCAAGATGTCGGCCTACTGGTTCAGGGACCTTGTCCGCAGCAAAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003613