Os08g0551200

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0551200| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001068984.2 GI:297608958 GeneID:4346257| ...")
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Gene Name

Os08g0551200

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001068984.2 GI:297608958 GeneID:4346257

Length

4758 bp

Definition

Oryza sativa Japonica Group Os08g0551200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27722987..27727744

Sequence Coding Region

27722987..27724256,27724358..27724503,27725125..27725348,27726065..27726834,27727671..27727744

Expression

GEO Profiles:Os08g0551200

Genome Context

<gbrowseImage1> name=NC_008401:27722987..27727744 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27722987..27727744 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcggccagtccaagactgacgggggcgggggcgggggcggcgcggctgtggcgctgtgccgggaccgcgccgcgctgctggccgacgccatccgccaccgctacgcgctcgccgacgcccaccgcgcctacgccgcctcgctgcgggacgccgccgccgcgctgcacgacttcctccgcggcgtccaggcgctgccgccgccgtcgtcgtccgacgtcgaccacgccgcgccgctgcgcctccccgacctgaggaagggggaccactcgctccccgccgccgtggttcccctccccgtcgacgcggtggtcatcaaacaggttgacgacgacggcggcggccacatacatttcccctccgacgacgacgacgacgagggcggttctgatggtagtggtggccacatccatttcccgtccgacgacgacgacgacgctgagccgcctcccccacgccccgccgcggctccggcgccgcacgccgccacgctatacacctacgctccgccgtacggctacggccccggcgccgggcagtatgaatacggcgtcgacatgggcggctacggccagagcttcttcagcatcagctacgcccggagccagccgccgccgccgtcgtccgttgtgtcctacgagcaccgcccccaaacggtcaatgcgactgttcactactacccgggggacggcgccgccgggccaccgcttcccggctcctactacggcagcgccgcgccgccgccatcgccgccgcgggtgtccgcctgggacttcttcaacccgttcgagtcattcgagagctactaccaccaggaccagccatctcctgctccaccggcctacacgccaagccggagctccaatggcgcgcgggaggaagatgacaatggcatccccgaggtggagcacgacgaggtcgacaaggttgacaaccaccaggatgccaatggcatgccattgccggcgaaggatgtcagtgaggagcagcacaggaagtccaagtcctcggaggccagcagtagtaccagcagcagcatgatcagtgatctccatgtagttcagaagagtgtgattgaagaacagctgcggcattcggatgccgcggggcctcccgcgatccccaggaaggtttacaatgacgatgtcgaggtggtggaggagatcagatcacaattcgagcatgccgcaaagtccgcattcgatgtatccaaggtgcttgaggttgggaagatgccttactaccagaagagttcaggattaaaagtatcctcgatgatgatttgtgggctatcttcggtgggggaggagttcctgcaatttgaggaggacaaggctatggaatgtggtaacctttcttcaacattgcagaagctgtacatgtgggagaaaaagcttcttgaggaagtcaagactgaggagaagatgagggtgctgtataaccaaaagcgtgaggagctgaaagttttgtatggaaggggtgccgaagcacacaagcttgaggcaactgaaactcatatcaggaagctatcaacaaagataagcattgccattcagattgtcaatactatctcaaaaaacatcaataatctgagagatgacgaactatggccgcaaacatgtgaactgattcaagggttaatgcaaatgtggcatgccatgtcaaaatgccatcagatccaatgccacgccatatcccaagctagaaacttggactctaagctagattctgcaaggttcagtgaagctcacatggacttaatcaagcggctagagcttcagttactggagttgatttctagttttgctacatgggtcaatgctcaaaagagctttgttggcactttaaatgagtggctcaagaggggaattgactatgtgcccgaagttaccgatgacgggactccccccttttctccaggacgcttaggagcgccccccattttcatcatctgtaataattgggcaatcggcacgggaagaatatcggagaaggaagtagtagacaaaatgcaggcttttgcctcaagtgtcctgcacctctgggagaagcacaggttagaatggaggcaaggtatgatggctaacaaagatatggacagggaccttagagtgatggagagggatgaactctcaatgcgcaaggctctcgatgcgcaaagcaagaagcttgtgcttgtttccaatcagagtggcgtgtcgttatctgcgcaggtggttcacgatagtggtccaactgctgaagttggtttgcaatcttgtatgaataaggtctttgaagcaatggagagcttcactgccgcttgtgcgaatgcatacagtgatctccatcttcgctctgaagaagagaagactcgactcggccaaaacaatggcagagttcctagcttcatttcagacttagctgtatgcactgttcttgaatctggttgccaagctgttcttgaaagtgacaaccagatcagtacatatgaaacatga</cdnaseq>

Protein Sequence

<aaseq>MGCGQSKTDGGGGGGGAAVALCRDRAALLADAIRHRYALADAHR AYAASLRDAAAALHDFLRGVQALPPPSSSDVDHAAPLRLPDLRKGDHSLPAAVVPLPV DAVVIKQVDDDGGGHIHFPSDDDDDEGGSDGSGGHIHFPSDDDDDAEPPPPRPAAAPA PHAATLYTYAPPYGYGPGAGQYEYGVDMGGYGQSFFSISYARSQPPPPSSVVSYEHRP QTVNATVHYYPGDGAAGPPLPGSYYGSAAPPPSPPRVSAWDFFNPFESFESYYHQDQP SPAPPAYTPSRSSNGAREEDDNGIPEVEHDEVDKVDNHQDANGMPLPAKDVSEEQHRK SKSSEASSSTSSSMISDLHVVQKSVIEEQLRHSDAAGPPAIPRKVYNDDVEVVEEIRS QFEHAAKSAFDVSKVLEVGKMPYYQKSSGLKVSSMMICGLSSVGEEFLQFEEDKAMEC GNLSSTLQKLYMWEKKLLEEVKTEEKMRVLYNQKREELKVLYGRGAEAHKLEATETHI RKLSTKISIAIQIVNTISKNINNLRDDELWPQTCELIQGLMQMWHAMSKCHQIQCHAI SQARNLDSKLDSARFSEAHMDLIKRLELQLLELISSFATWVNAQKSFVGTLNEWLKRG IDYVPEVTDDGTPPFSPGRLGAPPIFIICNNWAIGTGRISEKEVVDKMQAFASSVLHL WEKHRLEWRQGMMANKDMDRDLRVMERDELSMRKALDAQSKKLVLVSNQSGVSLSAQV VHDSGPTAEVGLQSCMNKVFEAMESFTAACANAYSDLHLRSEEEKTRLGQNNGRVPSF ISDLAVCTVLESGCQAVLESDNQISTYET</aaseq>

Gene Sequence

<dnaseqindica>1..1270#1372..1517#2139..2362#3079..3848#4685..4758#atggggtgcggccagtccaagactgacgggggcgggggcgggggcggcgcggctgtggcgctgtgccgggaccgcgccgcgctgctggccgacgccatccgccaccgctacgcgctcgccgacgcccaccgcgcctacgccgcctcgctgcgggacgccgccgccgcgctgcacgacttcctccgcggcgtccaggcgctgccgccgccgtcgtcgtccgacgtcgaccacgccgcgccgctgcgcctccccgacctgaggaagggggaccactcgctccccgccgccgtggttcccctccccgtcgacgcggtggtcatcaaacaggttgacgacgacggcggcggccacatacatttcccctccgacgacgacgacgacgagggcggttctgatggtagtggtggccacatccatttcccgtccgacgacgacgacgacgctgagccgcctcccccacgccccgccgcggctccggcgccgcacgccgccacgctatacacctacgctccgccgtacggctacggccccggcgccgggcagtatgaatacggcgtcgacatgggcggctacggccagagcttcttcagcatcagctacgcccggagccagccgccgccgccgtcgtccgttgtgtcctacgagcaccgcccccaaacggtcaatgcgactgttcactactacccgggggacggcgccgccgggccaccgcttcccggctcctactacggcagcgccgcgccgccgccatcgccgccgcgggtgtccgcctgggacttcttcaacccgttcgagtcattcgagagctactaccaccaggaccagccatctcctgctccaccggcctacacgccaagccggagctccaatggcgcgcgggaggaagatgacaatggcatccccgaggtggagcacgacgaggtcgacaaggttgacaaccaccaggatgccaatggcatgccattgccggcgaaggatgtcagtgaggagcagcacaggaagtccaagtcctcggaggccagcagtagtaccagcagcagcatgatcagtgatctccatgtagttcagaagagtgtgattgaagaacagctgcggcattcggatgccgcggggcctcccgcgatccccaggaaggtttacaatgacgatgtcgaggtggtggaggagatcagatcacaattcgagcatgccgcaaagtccgcattcgatgtatccaaggtgcttgaggttgggaagatgccttactaccagaagagttcaggattaaaaggtttattatgatgcattccttgctttcctgtctaaacttccaatcttttttgccattcaatgagacaagtggaaattttcataaccaaattgctgttgcagtatcctcgatgatgatttgtgggctatcttcggtgggggaggagttcctgcaatttgaggaggacaaggctatggaatgtggtaacctttcttcaacattgcagaagctgtacatgtgggagaaaaagcttcttgaggaagtcaaggttctgatcgcgctctacaattttgaatttctagctgaatgattttaatccttcatgggtgtacttctttctcccctttagatgtctgttttgaacattcagttcaggaaagcaaagctgactgtttgctgttattaacttgtttttagctgcctaatattgtcaaagtatattcagttcgaatattttgagtaacaaactgtatttacataatgaacttggatataactatttcttgtcaaatatgcacatttctccttttcggaaacttgtcgtgtagttaattatagatgattaggagtttgcactacaaataagtgcaatctgatagttttaatgccactgaaattgtttgccgcatcccttatctgcattcgttgtcataatgacatgtgggatccaactctgcatatcagtattcccaagaaatgattatgccttacagttttactctgtagagggctttatgtttcttgtgctttgtctttaccattcctttcccttgctttggcatgtcatcccattattgttttacttttataggcttgttaaagaagacttgatttcttcttttattatgttcagtgttgggttatactcaagcaactttgtttatcacagactgaggagaagatgagggtgctgtataaccaaaagcgtgaggagctgaaagttttgtatggaaggggtgccgaagcacacaagcttgaggcaactgaaactcatatcaggaagctatcaacaaagataagcattgccattcagattgtcaatactatctcaaaaaacatcaataatctgagagatgacgaactatggccgcaaacatgtgaactgattcaagggtatgcgatatgcatctctttacatgaaattccacatgagttgtactactactactactaatgcatattttgcatacacaatgcacatacacatacatttttatgactttttcattgaatggagtagatcagggtaggcagtatggacaaatttagaatttggttcgcaagaaggcaagaatttagcattcttaagtacacatttagacacaactgttagtatgtgaaatatttggcatttcaggcatttagtgattactggtgagcagggtttcccataccaccggggccggggttaccgcgccccggcggtaagcacggttaccgcgcggttaccgtggtaaccgtgaaaaaccgtgcaaaatttatcaaaaattcaaattatttttaaaatttatttgaatttaaggaggttaccgcggtatttattaccatacccccgcagtaagcccggtaaccgcgcggttaccggcggtaacataaaccctgctggtgagcattaacagaatgcattgttacattttctcctcactttatggtgtactggcactgccatgtgattattagtttcgattattatgactttctacatgctgtcagtacaaattcgaaatgcttcttaaatcttaacgggtgttgttattcaactttaagttgtcaccttggattactttgttatttgcatgctaacttggacatacacaatggattttcaggttaatgcaaatgtggcatgccatgtcaaaatgccatcagatccaatgccacgccatatcccaagctagaaacttggactctaagctagattctgcaaggttcagtgaagctcacatggacttaatcaagcggctagagcttcagttactggagttgatttctagttttgctacatgggtcaatgctcaaaagagctttgttggcactttaaatgagtggctcaagaggggaattgactatgtgcccgaagttaccgatgacgggactccccccttttctccaggacgcttaggagcgccccccattttcatcatctgtaataattgggcaatcggcacgggaagaatatcggagaaggaagtagtagacaaaatgcaggcttttgcctcaagtgtcctgcacctctgggagaagcacaggttagaatggaggcaaggtatgatggctaacaaagatatggacagggaccttagagtgatggagagggatgaactctcaatgcgcaaggctctcgatgcgcaaagcaagaagcttgtgcttgtttccaatcagagtggcgtgtcgttatctgcgcaggtggttcacgatagtggtccaactgctgaagttggtttgcaatcttgtatgaataaggtctttgaagcaatggagagcttcactgccgcttgtgcgaatgcatacagtgatctccatcttcgctctgaagaagagaagactcgactcggccaaaacaatggcagagttcctagcttcatttcagacttagctggtaagtacatagcaagtaactgaccttggaggtttggatgaacagcaacagtgtgcagagccatcacagattctcaattccagtctcacaaccgatgtgccttgcttttgcttggtttgggccctctgccaagtttcagggtcatccttaggcctgcagcaactgatgtgagatctgtgttggcctgcattctcagggttgaatgatcttcttttgtggtcataatcatactggagaaaactactgtcctgtaaagaagttaatcaccaattcaccacaatgttattgacaaaggggcacaaagcatcagactatcagagatacaaaacaatggacattatctataaaagaaagagactgagcaatggaagattctgacaaagaaacagagatcaagatatttcttcttagaggccctataattgcttgtagaaattctctatcaagaatcaaggcagtgtttaaggaggttggtactgtggatgaatcttagctgatactcgataatgagataatttttttagataatggatatcactcctgcctctacatcgataatgagacatgtttgatgctctgtttggagtctctactcgataattcccaccgaagcatttgggaattgggagcctcagcatgacagcattttaggcagacatggccctgatactgcaactcttcaatctcctaatttgattggctgtcgaaaaaaagtctctctctgtgtttatctgtatacacatgatatgattcatttgtacctgtgacactgtaactttgtacagcgagtgtaacttgagttgagcctttttctttcatctcttaacctgtctcagtatgcactgttcttgaatctggttgccaagctgttcttgaaagtgacaaccagatcagtacatatgaaacatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0551200, RefSeq:Os08g0551200