Os08g0552900

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Revision as of 13:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0552900| Description = Cyclin-like F-box domain containing protein| Version = NM_001188760.1 GI:297726650 GeneID:9270220| Length = 3862 bp|...")
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Gene Name

Os08g0552900

Description

Cyclin-like F-box domain containing protein

Version

NM_001188760.1 GI:297726650 GeneID:9270220

Length

3862 bp

Definition

Oryza sativa Japonica Group Os08g0552900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27750754..27754615

Sequence Coding Region

27750754..27750987,27751095..27751250,27751358..27751693,27751881..27752189,27752422..27752504
,27752971..27753163,27754392..27754507,27754600..27754615

Expression

GEO Profiles:Os08g0552900

Genome Context

<gbrowseImage1> name=NC_008401:27750754..27754615 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27750754..27754615 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgttgctaaagatcatgtgcaagacacagcttcatttgcatggcagacaagcagaatcctgccagttcacctcccaaatgctgtctatcaatggtttgagatctggcagcagcatatggaatcactcatacacgcagagcaaactcctgcaaaatttgtgtttgagcctttcaccgtcctggactcaaaccatgaaagcccaaacaagacgttgtattggcctccgactcgctgctccctcggcctcgactcctcggcccgccgcctgcgccgacctccaatctcgcgaccagcggcgccggcgtcctcgccgccggccgaaaagggctcgggcttgccctctagtcaacaagatggtgatgattctcaagctgtcaaagcaacaattccagaccttcctgaggacatctggtgccatgtacattccctaatgccactgcgtgatgctgctcgtgctgcttgcctatctcgtgcctttcttcattcctggagatgtcgtcccaatctcaccttgactagggaagtgtttctcccggaagtacattcactacattcacatatagtgaatgccagcgacataattgatggcattctaagaaaccgctcaggctctggtgtgaagatattgaagcttcaattagagggcatttcccttctctgcctcgaccgttggcttaaacttgctgttacaccgatgactgaagagctcattgatgagttggagtgctttctttccaattctactattgctttggagcagttgaacctcagcaactgtgaggagataatttgcctgaagataccttgcgtgctgcaaaaattgagctgcctggtggttgctggatgctgtaggctgcgagtgatagagagcaatgctccaaatctttccagtttaagcttcagcggaaatgtaaaactctcacttggagacccattgcaagtgaagagattaagcatgatccatccaaaggttgtctgttatgctcgtgccgagctgccatccgttatgccaaatcttgagactcttgccatttactccaatgatgaggtggtcaatacaccaatgctgcctacaaaattcctctaccttaagcacctcaccatttccgttagctcagcagcctcctttaacacgtcgtatgattatttttctcttgtttctttccttgacgcgtctccttccttggagacattgatcttgaatgtatcacaagagcatatgaagcatgaatcggttcttggagattcctcgcctttgaggcagatgccggaacaccgccattgctacctcaagagtgtgaagatgacagggttcagctccgcgaagaacttgattgagctaacatgttatatcctcaagaacgcggtgtcactcgagtgccttacattggacaccctttatgaaagggcatgtagcctagtggttacagtgacctga</cdnaseq>

Protein Sequence

<aaseq>MPVAKDHVQDTASFAWQTSRILPVHLPNAVYQWFEIWQQHMESL IHAEQTPAKFVFEPFTVLDSNHESPNKTLYWPPTRCSLGLDSSARRLRRPPISRPAAP ASSPPAEKGSGLPSSQQDGDDSQAVKATIPDLPEDIWCHVHSLMPLRDAARAACLSRA FLHSWRCRPNLTLTREVFLPEVHSLHSHIVNASDIIDGILRNRSGSGVKILKLQLEGI SLLCLDRWLKLAVTPMTEELIDELECFLSNSTIALEQLNLSNCEEIICLKIPCVLQKL SCLVVAGCCRLRVIESNAPNLSSLSFSGNVKLSLGDPLQVKRLSMIHPKVVCYARAEL PSVMPNLETLAIYSNDEVVNTPMLPTKFLYLKHLTISVSSAASFNTSYDYFSLVSFLD ASPSLETLILNVSQEHMKHESVLGDSSPLRQMPEHRHCYLKSVKMTGFSSAKNLIELT CYILKNAVSLECLTLDTLYERACSLVVTVT</aaseq>

Gene Sequence

<dnaseqindica>3629..3862#3366..3521#2923..3258#2427..2735#2112..2194#1453..1645#109..224#1..16#atgcctgttgctaaaggtctgtatttctgtgttgaggccaagaagatgagaaggaaatgaaagtttcgtttggtgtgtctagccttgtgctgaggagtacttatacagatcatgtgcaagacacagcttcatttgcatggcagacaagcagaatcctgccagttcacctcccaaatgctgtctatcaatggtttgagatctggcagcagcatatggaatcactcgtatgctgttcgattttttagtgaactgacatctatcttctcaatgtgctatcgcattgtcatgtcccaactattggcagcaacaaccagcaggttagttcaccctaccggttgatcttgacacatttgcatgctctcaagggattatcttattagagtgctaacaagtattactgttgacatgcgtttttctagttcttgtgctctcgttgattacaacatgtgttgtattatgtgcaatccgtgccgcttacacgctcaacatcttgtgttggagctgccctgttatttttattggtggagcaagatcgttgcttgctgctgaggcagcatttgtcatctgagtgacatgggcgatttgcccatttcacattaaagcatttcgaaggtgaactttaatgtcatctgttttttttttttgtgacagtcaatattgatgagcatcaatcttctaaggaaattaagttttttaccttttggtactaaagcatgtgcatagacagtgtaatcaacaatagaagatggactgaatcctgtttttatttttcagtgagtatatttctacacatttttctcatgtttatataaacattgggagactatttcaacgatcggcgaattctctaaaacgcgggtgccaagcacaggggattagagctcgcaaatctaccttcaagctgaagtaggagtcggaaagtgaaactctactttgaatcaatttcctgaacaggttcttaattccattgtctagattaacaatgttcagttctaacacctacaattccttgtcgcaggcaactcttatcttgtggattctggactatcttctgacctgacctgcctgtgttaatttgaatgtgtatcctgtagtgtgatcctccctgtcaatgtccccaatgaatcctacgttcattttaatttggaatgcaagggggcttgacaagattgctaaacgcaactatgtgctgaattgctgatattgtttgttatcaagagaagagaccaaaaatttgtatagctatttttttatcattaatttcatgcctcctcccggtgcttggaaaataaaggctcgagttgtcaggcgaacaatcagcatgttgatacgacataccagcattcgttgaatgaatttatcagcaaaacatgttgcgaataagaaagacagaaacttgttagttatatttgtttagtgaaagggatatacataacttgaattgaaatacagatacacgcagagcaaactcctgcaaaatttgtgtttgagcctttcaccgtcctggactcaaaccatgaaagcccaaacaagacgttgtattggcctccgactcgctgctccctcggcctcgactcctcggcccgccgcctgcgccgacctccaatctcgcgaccagcggcgccggcgtcctcgccgccggccggtgagcgcctcatttttctctctttcccataacattacattctctacttgttgatctgggagcttttctctctgccttaaccttgagtattatttatgctgatagcatatgcaatttgtttgcagaaaaaaataacttggggctataggttcgcccctctggtgcctatcgtttttaaccatgggttagttgatctgttctcaaaaaaaaaaaaagtatctttgcccctcggtgggttccctctgattgatactttcgttttgctcaatcggttgctgtttccttgagttccttcttaatttttccccttgttccaatccatatcaatatctgggatatatatttttagataatggtctgggatatatatggactattattgtaactattatcaatatatatatattgagtaagtctctgtgcttggttgcgttgcagttggatccattgcttcaatgaatactagaaaagggctcgggcttgccctctagtcaacaagatggtgatgattctcaagctgtcaaagcaacaattccagaccttcctgaggtacgtagggcggcatgaaattctgacctttctgatacattccactgcactatcaattaattatcaactcttgtaaatctgcatatcacttgcaattaatcatgccaaaaggtatacctgggtagaatataaccctcctactccatgtggtacttctgtttttctttctactgtccaagtaaccatttggctctttcggcattgaactctactcgcatatgctcgtatgcaggacatctggtgccatgtacattccctaatgccactgcgtgatgctgctcgtgctgcttgcctatctcgtgcctttcttcattcctggagatgtcgtcccaatctcaccttgactagggaagtgtttctcccggaagtacattcactacattcacatatagtgaatgccagcgacataattgatggcattctaagaaaccgctcaggctctggtgtgaagatattgaagcttcaattagagggcatttcccttctctgcctcgaccgttggcttaaacttgctgttacaccgatgactgaagagctcattgttatgctatgtactagtattacagcagagtacaatttcccatgctcagttttatccagtgggattcgaagctcaattcggtatcttaaacttggctattgtgcctttcgccccacagctgaacttggcaccttgagaaacctaacaactaacaagtctgagtctgcattttgtacatgttaccgaggatgagttggagtgctttctttccaattctactattgctttggagcagttgaacctcagcaactgtgaggagataatttgcctgaagataccttgcgtgctgcaaaaattgagctgcctggtggttgctggatgctgtaggctgcgagtgatagagagcaatgctccaaatctttccagtttaagcttcagcggaaatgtaaaactctcacttggagacccattgcaagtgaagagattaagcatgatccatccaaaggttgtctgttatgctcgtgccgagctgccatccgttatgccaaatcttgagactcttgccatttactccaatgatgaggtatcgatctctaaaacattaggcgttttattatgcatattaagagtagttgtatattataggattattaattctaattaatttgagacatgacatacattgtgcaggtggtcaatacaccaatgctgcctacaaaattcctctaccttaagcacctcaccatttccgttagctcagcagcctcctttaacacgtcgtatgattatttttctcttgtttctttccttgacgcgtctccttccttggagacattgatcttgaatgtaaggcactcttcgctcattccatcctgcaaagatatactcctctatctgatcactgatctcttggatatgtatactttatttgacttatcttttatcattatcaggtatcacaagagcatatgaagcatgaatcggttcttggagattcctcgcctttgaggcagatgccggaacaccgccattgctacctcaagagtgtgaagatgacagggttcagctccgcgaagaacttgattgagctaacatgttatatcctcaagaacgcggtgtcactcgagtgccttacattggacaccctttatgaaagggcatgtagcctagtggttacagtgacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0552900, RefSeq:Os08g0552900