BGIOSGA003802

From RiceWiki
Revision as of 18:26, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003802

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003802, complete gene.

LocusTag

OsI_02512

Ensembl Transcript ID

BGIOSGA003802-TA

Ensembl Protein ID

BGIOSGA003802-PA

Length

3695

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24312769..24316463

Sequence Coding Region

24312769..24313911,24314279..24314341,24314460..24314588,24315213..24315263,24315641..24315781
,24315894..24316463

Genome Context

<gbrowseImage1> name=IndicaChromosome01:24312769..24316463 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:24312769..24316463 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAACCCTCGCCCGTCCCGCCCGCGGCGGCTCCTGCCTCCCTCGCCGCCGCGCCGCCCACCACCGATGTCCTCTCTCGCCGGAGAGCCCATCTCGACAGCGCCTCCTACCGCGCGCTCTCCCGGCTCTTCTCGCACTGCCTCCACCTGCACCCTCCGCGGCACGCGGCACGCCCCGACGCGGAGGTCGAGCCTGCCGCCGCCGCCGCCATCCCTCCCGGCGGCTCCGGCGGGCTTCCCCATGGGGATTCGCCGCCTCCTGCAGACGTGGGAGGCGATCGGGGGAAGAACTTAGAGGTGGAGGTGGCTCTGGGAAACCATGCTCCGCACGAGACGCCTTCGACTTCGGTGTCCCCGGACGCCGCCGTGAACCCTACCACCGATCCCGGCGTGGTGCCGCAGGGGACGGAGGAGGGTAGAGTCGCTGGGGTCGAGCGGGTGGAGGGTGTAGAAGAGGTTGTTTTCGCCGGAGGCACTTCCGGGGAGGCTGATGCCGATGGCGATGAGTTGGGGGCTGGGGCTGGACTGATGGGGGATGACGAGGCTTTGAGGTCGATGCAGGCTTGCTTAGACGGGGAGGATAGTGAATTGGTGATTGAAATGGTTGGTAATGACAATGAGCAATTGCAACTCGATGCGATGATGAACAACTTGTCAGGGTTGATTGATGATGCTAGTGCCTGTGTAATGTCGGCGCAGAGCTGTGGAGTATCTGGAGATAAACTGCAGAGTGATGACAGAGTAGCTGAGGAGGTGAAAGAATTGGGAGCTGGGATTGGCAATGACAGATCTGTGTGCAGTTTAGATCATGGGTCACTGGATGGTGGTGGTGGTTTTGAGGAAGGAGAGATTGAGGGCGACACGCAGAATTTAGATGCAGATGATTCTGGCAATTCAGAGCTTCAAGATGATGTGGAATTGGAAGAGGATTTTGATAGCAGAAGGATAGAGGAGGATGGGTCATGTGGCCATGACTTAAAGAGCAATTTGCATTTGATACCTCAAAAAGGAAATGGCGACACTGCACGGAACATGCTATGTAATAGCAAGGGTGATTCTCAAATGCATGTTGCCAGGGCGCAAGCAGTCAGTTATGATGAAGTTCTCGATTGGAATGAGACACCTTTGCCTGATGATAAGGCTCTCAAACATGGAAACACAAGAAAGCGCACCTTGACAGAGGAGAGAAAAGCTAAGAAGACGAAAACTAAACGAATTAAGAGAGCATTGCAACGGGAAGCCGAAGGGGTGAAAAGACTGAAACTTCAACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACTTGCATGGGAAGTGCCAGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCTTTGACAAAATCTAAGCCCTGCACGCATTATGCACGTGGTTCTTGTTTGAAAGGAGATGATTGCCCTTATGATCATGAGTTGTCAAAGTACCCTTGCCACAATTTTATGGAAAATGGAATGTGCATCAGAGGTGATAAATGCAAATTTTCTCATGTGATACCAACTGCAGAAGGTCCGTCCACACCAGATGCAAAGAAATCTAATGCGTCATCAGTACCTGAAAAAGCAAATTGCCAAGAGCAAACAAGTCGTCAGAAAACTTCAACAGTATACAGTGGTGAACCTGCAACCTCTGTTCCTATCAAACATCATTCCATCCTTAAAAACCTTGCTGGCATATCAGGAAATGCTCAAAAGGTACCTATTCGTATACCAAGGGGTATACAGTTTCTTCCTTTCAATAAAGCCAGACCAGATTCTAGCATTTTGCATCAGGATGTTGTGTCCACTGAGAAGCATAAGAATCCAACTGGTGGTCCACATCAGAACTTTGGAAGACCTCAACCCGCAGACGGGAAAAAACTTGGCAAGCACAATGGACATAGATCAGCTCCACTGTTGGATGAAAAAGACTCATCAAAACAAGCTAATCTACATCCATGTTCAGAACCAAAGAAAAATAGTTTGCCTACCACTGCTGCAGTGCCCAGCTCAGTAAGCACTCAGCATGAAGTTTCAGAGGCCTCCAGGATTTTGCAGGAGTTCTTGTTTGGTTCTGGCAATTAG</cdnaseq>

Protein Sequence

<aaseq>MEEPSPVPPAAAPASLAAAPPTTDVLSRRRAHLDSASYRALSRLFSHCLHLHPPRHAARPDAEVEPAAAAAIPPGGSGGLPHGDSPPPADVGGDRGKNLEVEVALGNHAPHETPSTSVSPDAAVNPTTDPGVVPQGTEEGRVAGVERVEGVEEVVFAGGTSGEADADGDELGAGAGLMGDDEALRSMQACLDGEDSELVIEMVGNDNEQLQLDAMMNNLSGLIDDASACVMSAQSCGVSGDKLQSDDRVAEEVKELGAGIGNDRSVCSLDHGSLDGGGGFEEGEIEGDTQNLDADDSGNSELQDDVELEEDFDSRRIEEDGSCGHDLKSNLHLIPQKGNGDTARNMLCNSKGDSQMHVARAQAVSYDEVLDWNETPLPDDKALKHGNTRKRTLTEERKAKKTKTKRIKRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNASSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPIRIPRGIQFLPFNKARPDSSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGKHNGHRSAPLLDEKDSSKQANLHPCSEPKKNSLPTTAAVPSSVSTQHEVSEASRILQEFLFGSGN</aaseq>

Gene Sequence

<dnaseqindica>1..1143#1511..1573#1692..1820#2445..2495#2873..3013#3126..3695#ATGGAGGAACCCTCGCCCGTCCCGCCCGCGGCGGCTCCTGCCTCCCTCGCCGCCGCGCCGCCCACCACCGATGTCCTCTCTCGCCGGAGAGCCCATCTCGACAGCGCCTCCTACCGCGCGCTCTCCCGGCTCTTCTCGCACTGCCTCCACCTGCACCCTCCGCGGCACGCGGCACGCCCCGACGCGGAGGTCGAGCCTGCCGCCGCCGCCGCCATCCCTCCCGGCGGCTCCGGCGGGCTTCCCCATGGGGATTCGCCGCCTCCTGCAGACGTGGGAGGCGATCGGGGGAAGAACTTAGAGGTGGAGGTGGCTCTGGGAAACCATGCTCCGCACGAGACGCCTTCGACTTCGGTGTCCCCGGACGCCGCCGTGAACCCTACCACCGATCCCGGCGTGGTGCCGCAGGGGACGGAGGAGGGTAGAGTCGCTGGGGTCGAGCGGGTGGAGGGTGTAGAAGAGGTTGTTTTCGCCGGAGGCACTTCCGGGGAGGCTGATGCCGATGGCGATGAGTTGGGGGCTGGGGCTGGACTGATGGGGGATGACGAGGCTTTGAGGTCGATGCAGGCTTGCTTAGACGGGGAGGATAGTGAATTGGTGATTGAAATGGTTGGTAATGACAATGAGCAATTGCAACTCGATGCGATGATGAACAACTTGTCAGGGTTGATTGATGATGCTAGTGCCTGTGTAATGTCGGCGCAGAGCTGTGGAGTATCTGGAGATAAACTGCAGAGTGATGACAGAGTAGCTGAGGAGGTGAAAGAATTGGGAGCTGGGATTGGCAATGACAGATCTGTGTGCAGTTTAGATCATGGGTCACTGGATGGTGGTGGTGGTTTTGAGGAAGGAGAGATTGAGGGCGACACGCAGAATTTAGATGCAGATGATTCTGGCAATTCAGAGCTTCAAGATGATGTGGAATTGGAAGAGGATTTTGATAGCAGAAGGATAGAGGAGGATGGGTCATGTGGCCATGACTTAAAGAGCAATTTGCATTTGATACCTCAAAAAGGAAATGGCGACACTGCACGGAACATGCTATGTAATAGCAAGGGTGATTCTCAAATGCATGTTGCCAGGGCGCAAGCAGTCAGTTATGATGAAGTTCTCGATTGGAATGAGACACCTTTGCCTGATGATAAGGTATAGCTTCTTTGTCAACCACAAATGCGTACAAGCTTGCCATATTCTCTCTTTTTTTGGTACCCATACGCTGTTTTGTTGCTTCATTGTTTATGCACAATTTTGATTAATTCTTGTTTGATGTTTCATATTAACTGAATTCAGTAGCTTTTTTTAATCATCGCATACATACCTTGCTTGAGTACAATGAATGCAGTTCGAGTGTTCACACTTCATGACTTTCTTTGTAACTTCAAGTTAATCACAGTCAATTTACAATGCAAGATTTTTAAGAACAATATACAATACAATTGATTCGTCTGTGTTAAGATTTTCTTCTTAGCTACGTAAGTATGGATTTTCAGTCTGTTCTATATTAATATTGCAGGCTCTCAAACATGGAAACACAAGAAAGCGCACCTTGACAGAGGAGAGAAAAGCTAAGAAGACGGTATGTTCTGATCTCAGGACCATTTGGTTCCAATGTATAAACATTTTTGAACTGTGCATTCAAATAGTTTTTACCTTTAGAAATATTAAGATTTGCTTTCAATGCTATTAATATGCAGAAAACTAAACGAATTAAGAGAGCATTGCAACGGGAAGCCGAAGGGGTGAAAAGACTGAAACTTCAACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACTTGCATGGGAAGTGCCAGCAGGTGAGTCTGTCTCTCAGATCAGACAGATGGTAGTCATCATCTGCTTCACTTTTGGATCGACAAAAATTTATATTCTTTGCTGTTGTAAACTGCACAGCACATGCGCTGGCCTTGAAACATATTGTAGCGATTTTCTGGACACACTGATTATATTTGTGTAATTTAGTGATTAGCCATATCAGTAGCATAGGATGCATATTTTGATTCAGTGTCCACTAGATAGCACCTGGTAACGATTAGCCCTGCCTAGGTCTGTCTATTTGCTGATTAGGCGCTGGTGTGCTGCCTGAGAGCTTAGACCATGATGAACACTGTTTATATAATCATATTGTTTTCATCATGTAACATGTCCACTTTATTCTTGGTATATGTGTTATGTTTTCTATATAAATATGTTACAAAGACTGTAAAAATGCTTTTCACAGGATTTACTTTAATAAAATACTTCCTCTGTTTCATATTATAAGACTTTCTAGCATTGCCCGCATTTATATATATGTTAATGAATCTAGACATATATGTGTGCCTAGATTCATTAACATTTATATGAATGTGGGCAATGCTAGAAAGTCTTATAACCTTAAACGGATGTAGTACCTAATATTTCTTATTTTTTTATTGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCTTTGACAAAATCTAAGGTATCCATTTCATAGAAGTTTATCACATGCTTGCAGTAATCATAATGTATTATAATAAGATGCATGTATGCTGTTTAATATGTGTGGATATATTCTATGTGGTCTGCCCACACGCAAGCATGAGCTCATTTTGTACGCACCTATGCATACCACCTATTTTTTAGATGAAAATGTGACATCAATATTGAATTTGAACTTTAAAGCATGCACAGAACAGGTTCGCACTGCACATGTTATGAATACGTATCAGTATAGTGCTAAATCATAAACTGAAGTGTACCCAAATCTTGATCCAAGTATTGGTACTAAACTTCCTGTTGTATCTGTCCTTTTGAGGTTTTGCGAATTTTATCCTGATTTTTTTTTTGCCTTGACAGCCCTGCACGCATTATGCACGTGGTTCTTGTTTGAAAGGAGATGATTGCCCTTATGATCATGAGTTGTCAAAGTACCCTTGCCACAATTTTATGGAAAATGGAATGTGCATCAGAGGTGATAAATGCAAATTTTCTCATGTGGTACGTAATTTAACAAATCATTCACTCTTATTTAATTATTGGTGTTATAGCCTGGTTAAATTTTAATATTAGCAAATGCTGTGAATTAAGCAAGCTTTGCACTCGTTGTCAGATACCAACTGCAGAAGGTCCGTCCACACCAGATGCAAAGAAATCTAATGCGTCATCAGTACCTGAAAAAGCAAATTGCCAAGAGCAAACAAGTCGTCAGAAAACTTCAACAGTATACAGTGGTGAACCTGCAACCTCTGTTCCTATCAAACATCATTCCATCCTTAAAAACCTTGCTGGCATATCAGGAAATGCTCAAAAGGTACCTATTCGTATACCAAGGGGTATACAGTTTCTTCCTTTCAATAAAGCCAGACCAGATTCTAGCATTTTGCATCAGGATGTTGTGTCCACTGAGAAGCATAAGAATCCAACTGGTGGTCCACATCAGAACTTTGGAAGACCTCAACCCGCAGACGGGAAAAAACTTGGCAAGCACAATGGACATAGATCAGCTCCACTGTTGGATGAAAAAGACTCATCAAAACAAGCTAATCTACATCCATGTTCAGAACCAAAGAAAAATAGTTTGCCTACCACTGCTGCAGTGCCCAGCTCAGTAAGCACTCAGCATGAAGTTTCAGAGGCCTCCAGGATTTTGCAGGAGTTCTTGTTTGGTTCTGGCAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003802