Os08g0554000

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0554000| Description = WD-40 repeat containing protein| Version = NM_001068998.1 GI:115477734 GeneID:4346273| Length = 3827 bp| Definition...")
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Gene Name

Os08g0554000

Description

WD-40 repeat containing protein

Version

NM_001068998.1 GI:115477734 GeneID:4346273

Length

3827 bp

Definition

Oryza sativa Japonica Group Os08g0554000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27791408..27795234

Sequence Coding Region

27791489..27791533,27791608..27791694,27791846..27791978,27792087..27792198,27792777..27792876
,27793057..27793184,27793293..27793362,27793795..27793883,27793966..27794011
,27794101..27794171,27794249..27794322,27794407..27794465,27794588..27794629

Expression

GEO Profiles:Os08g0554000

Genome Context

<gbrowseImage1> name=NC_008401:27791408..27795234 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27791408..27795234 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggcgcggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccggaaccctcagtctcaaggaggagaacgaggtgcacctgatccggttttcaccggcggagagcgagctggtgtgcgacgggctgttctaccatccaaacgagatctgggaccttaagtcttgccccttcgatcatagggtcttctccacagtctacacgtctggcgagggctatggtgcatctgtttggaagatcccggagctgcacgggcagtcgaattcgccgccacttgagcagcttttcacgcttgatgagcacacgggcaaaataagatgtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaatatagatgcatcaaataagtcagccaaggtgatgcaaaaggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaagaaatcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaaacagcacttaattacaacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccctgggcattcgcattggacatgggctgttcggcacaatcctgagcatgaccagttgattctgagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactcaggacctgaaagtcctcctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagatagcatatacggtattgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaagggttgttttagaatcagtcaagccctacttgcagagaaaatga</cdnaseq>

Protein Sequence

<aaseq>MQGGSSGIVYGGLKYQARCIADVRAAAGSTTFLAGTLSLKEENE VHLIRFSPAESELVCDGLFYHPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPEL HGQSNSPPLEQLFTLDEHTGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKV MQKGSADMLPNLRGGSWDPHDHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFRDVDYN PKKQHLITTAEDEFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDS TVNLWFAKVGTDDSGPESPPGSPTREEEPLLNSYTDYEDSIYGIAWSSHDPSLFASLS YDGRVVLESVKPYLQRK</aaseq>

Gene Sequence

<dnaseqindica>82..126#201..287#439..571#680..791#1370..1469#1650..1777#1886..1955#2388..2476#2559..2604#2694..2764#2842..2915#3000..3058#3181..3222#agtctcgctcgtctccgtgcattccgcgatctccgtgcccgtcgaccaccgtggtgctcgccggcgacggacggagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggcaagccttctcgaaccttctagaacagtctcccgtaggggggcgcccctcacccttgcaccccactcttgcaggcgcggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccggaaccctcagtctcaaggaggagaacgaggtgcgtctcctggaggagggggggagggctctccgccccaactcgtcttcttccatcgactctggctctgccctgtgtgttgcagcaattcgagcaattgtagaagagaacgttgtgattggatctctaactcgttgttgctgccaagtaggtgcacctgatccggttttcaccggcggagagcgagctggtgtgcgacgggctgttctaccatccaaacgagatctgggaccttaagtcttgccccttcgatcatagggtcttctccacagtctacacgtctggtaaagaaagaattcccctctttgttactctctttctgccggtgcattgggcatttcatctagttgtaaatttctaaaaatttctttatgttatgatatggatggaaggcgagggctatggtgcatctgtttggaagatcccggagctgcacgggcagtcgaattcgccgccacttgagcagcttttcacgcttgatgagcacacgggcaaaataagatggtgcgcgctcttgtttctgttgatgttctgtgctcgcttgttctggtgccgtttagtcttattgctgtagagtattttgccgcttgttgattttatacatactggtaagtagtaaccagagtctagttgaagaatgcaactgtatgctgatgatttgcaaagcccaaaaagggtctcttattttggggattagtcgactcacaaaaacgatgactgtgattttaccaatgctactttatgaagcacattgtcatgagaaggttatacaccatatagggttcagcggatatttcaagttttcctagcataccttacttgtttacaacacatagctacaattcgaaggccaaagcaacataagaattaattttggctcgtccgaggttctctatagggagcacacaatagatgaaattttaatatttttatttaccaataccattttttgatctaaagttttagataagttatgacctttcttcacagtcttataacaatgtataagctcctttaatacattgttatttctggtggataccatgctcagactgtatctgtaagctggcttatctttgcagtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaatatagatgcatcaaataagtcagccaaggtgtgcccagcatccttctgttttaccaatagtacatcgacataattacgtgatattacattgtttctaagcattatcttcgcacttcagtgtcaactttatggaaacttacagttctgtatctctgttagcagaagttctgaacttaatcttgtcctaacttgaattcctaagttacaggtgatgcaaaaggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaagttaataccttcacaatcttgacatattagatttgttgatctagtgtctgtggtttagatgctgaaatgttccacttatatctttatctgtgaacttgttcttttcaggaaatcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaaacagcacttaattgtgagtggtgatacttgccgtacttcatttcaagtgtttcagatcaagccatagttcgtttgcttaagtcatggttatgaattagtactgaagagaaaaacactgttgtattacttccgttttctttgttacctgtcaacttcgtttcgtctttgttttgattaaggatcctgcagagattatttttcttacattagtaggtactgtgtggtatcagctgtgccgctacttgctagccgttacttcttttattgttcaatgaaactaaacactcggatttgattgtgttatctagctgaatcattgaaccctatttcagaggttgttgaatcagacaattgtgcaattaacggttatagtgataggtactgtttatttttattcagtttaatttatttatggttccaataaaagatcctttatgcattgtagacaacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccctgggcattcgcattggtatatttctatatcctgttttactcagattagaatcctttcgattcaatgtttagttagtcgacccttgtgaattttgcaggacatgggctgttcggcacaatcctgagcatgaccagttgattctggtctctccctctctctctatttcttcaagtggtttgcatattgtgatgtactgttttattgtgtactgactacattgtaactcctgtagagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactcaggacctgaaaggtttctattccttgtgtattttcttgtttggttactttgtttgttataatcttgatgcccacattcttgcttatcagtcctcctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagatagcatatacggtaccctcaggaattcctacctgtgtttataattctacgttataattttgacaaggaatcacacagcgtattaaaaaattgtaggtattgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaagggtaagtacctgcagcatttgtatgcttatttgaaatatttgtcttgtgattttttaaagccagtttatctgatatctgaatcttgactctaatgatctgtgataatttcctctaatggtcaggttgttttagaatcagtcaagccctacttgcagagaaaatgaagctgcatgttctctccgttgtaagggcacataactccacttctttgctcggtatgttgttgatgcgattaccaatagtaccttctcttgttctaacagaccttcccttttctgctcaagcagacttgtttgttgtgcatattattggtgttgtagattttctccttgccatcctatatactgtactctggtacatggagttgatgcgatggcctgattcgacagcttgtgaccccagaacaatagcaagccaataatgtttcagtaaccatcttggcagaaatccagtgtctcatatgatctgccactcttgtgattcaggccagctgtaattgcaaaattcagcctggtacaattgccaaatactgctcctcgagtgattcttgaatgtcatatatctgagaaaggttggtgtcaattgttgcgttatgtggtgaagtacaaccgatctgaattttgtagaactgttgagattgacaagatctgagcttctgtttttcattcgatttttcactgtatgagtggttcccttactttagcaaagattaatatttcgtctgtatgttacaaaatcattcagggaatgagcaaattaacttcaaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0554000, RefSeq:Os08g0554000