BGIOSGA003893

From RiceWiki
Revision as of 18:26, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003893

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003893, complete gene.

LocusTag

OS01G0595100

Ensembl Transcript ID

BGIOSGA003893-TA

Ensembl Protein ID

BGIOSGA003893-PA

Length

6185

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25950187..25956371

Sequence Coding Region

25950187..25950755,25952421..25952520,25952746..25952825,25952982..25953811,25953931..25954045
,25954556..25954675,25955180..25955217,25955313..25955362,25955451..25955486
,25956306..25956371

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25950187..25956371 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25950187..25956371 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACCCGACGACGCCGGCAGACGCGCAGCCGGAGCAGGCCCACGCCGCCGAGAAGCCCCCCGCGGCGCCGCTGACGCCCGAGGAGGCGGAGGCGGAGGCGGAGACGGCGGGGTCCGGGGATGACGAGGAGTACGTGAGCGACCCCGACGACGCGCTGCTCCCGGAGATGCGGCGCCGGGAGGCCAGCGACGACGAGGGGTCCGAGGAGGGGAGGGCGCGGATCGGGTCCGACCGCGGCGACGGCGACGACGGCGACGGGCAGGGTGCAGCCGAGGTGTACGAGGACGAGGCCTACGAGGACGATGACGAGGAGTACTACGATGATTTGGCGGAGGAGGAGGTCGGCGAGGGCTTCGAGGAGGAGTACGACGGCCGCGCGGAGCCGCCCAAGGAGGTCGCCGGTGCCCAGGGGGAGGATGGGGAGAAGGGCGACGTGGAGGGAGAGGCGGCGGTGGAAGGGGATGGAGAAGAGAAGAAGGAGCAGGAGCCGTTTGCGGTACCCACGTCCGGCGCCTTCTACATGCACGATGACCGCTTCCAAGAGGAGAGTCGTGGCCGCCGCAGGAGAATGTTTGGTGGGAGGAAGTTATGGGACGCTAAAGATGATCAAGCGTGGGTGCATGACAGATTTGAGGAAATGAATTTGCATGAGGAGCACTATGAGGTTGTTAGAGGGAGAGGACCTCGACGTTATGAAGCTGTTGCAAAGAACAACCGAGATGTTGTTGGATTCCAGCGGAAACAACCTGCAAGATCACGAGAGTCTGCTGCAAGTGCTTCAGCCGTCAGAGAGAGTGGCCAAACTTTAAATGCGCAGTCAGAAATGGCCCCTCCTAAAAAGAATGTTGTGAATTCAAGCTTAAATTCAGCGTCACCACCATTTTATCCCTCTGGTGCCTCCAACCCAGATTTCTCTGTGCCAGCTCAAAGAAGGGACAATATGCAAGCAGGGGGTTCCAATAAAGTCTTTCCATCTTCTATGAAGATGGATGACAATGCAAAGGTACAATCTGGCCCAGCAGTTAGAAGGGATTATGGTGCACGTGACAGGTTTCAACATGCTGATGGTCCTGTTAGACAATCTCCAAGGAGTGGAGGAACATCGTTGAATTCATCAGGATTTGCAGCATCGACAGTTAATCATGGTCAATCTTCTGTTGTTAGAACTCAAGGAGGAAATGGGATTCCTTCAAACAATCAGTCCACTTCGTCTCTTCACCAAAATCCTAGGGCTCCTACACACCAGCAAAGTCACACATCAGTCGTGCACCAGAAGTCAGGCCAAGTGCAAACTCAATCTGCAATGAGAATACCAACTCAGCAGTTGAACCATCGCACTGGCAACCCGTCAACCACTCAGCATCTACCTGTTAGATCAACTGAAAGTGTTGAGAATGGTCTGTATCCTAGTTCGAACAAATCAAATGCATCATCTGGGGCAGGAAAAACCAACAGTCAGGAAGCCGGAAGGGGTTCCTTTATGTATGGTGGAGCCCAGGTTATTGGGGCTGCTGGGGCTATTGGTCTTGCCCAGGGCGAACAAAATTTTCCTGGCACTCCAGCTCTCCTTCCAGTCATGCAATTTGGCAGTCAGCATCCTGGTGGTGTTGGAGTTCCTACTGTTGGTATGGCCCTCCCTGGCTATGTGGCTCAACAGCAGATGGGAATGGGAAATAACGAAATGACATGGTTGCCACTGTTAACTGGTGCAGCTGGTGCTTTTGGAGGATCATATCCACCTTATATTGCTCTGGATCCAGCCTTTTACTCCAGATCTTCAGGACAGACCTCATCGTCAGTTCCTTCCAGGAATCTATGCTACAAGGGGGCTTCCCCTCCTCGAAACGATATTGTCAATGAAGAGGTTGATCAGCGTCAGAACAAGCCTAGGAGGCAAATACTCAGAGATGAACTTCAGTCAGTGAAGCACCATGTTATAAACGCCTGTTTGTGCTGGTGTCACTTCACAGCAGACTCAGGGGTGGCCTTTGTTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MADPTTPADAQPEQAHAAEKPPAAPLTPEEAEAEAETAGSGDDEEYVSDPDDALLPEMRRREASDDEGSEEGRARIGSDRGDGDDGDGQGAAEVYEDEAYEDDDEEYYDDLAEEEVGEGFEEEYDGRAEPPKEVAGAQGEDGEKGDVEGEAAVEGDGEEKKEQEPFAVPTSGAFYMHDDRFQEESRGRRRRMFGGRKLWDAKDDQAWVHDRFEEMNLHEEHYEVVRGRGPRRYEAVAKNNRDVVGFQRKQPARSRESAASASAVRESGQTLNAQSEMAPPKKNVVNSSLNSASPPFYPSGASNPDFSVPAQRRDNMQAGGSNKVFPSSMKMDDNAKVQSGPAVRRDYGARDRFQHADGPVRQSPRSGGTSLNSSGFAASTVNHGQSSVVRTQGGNGIPSNNQSTSSLHQNPRAPTHQQSHTSVVHQKSGQVQTQSAMRIPTQQLNHRTGNPSTTQHLPVRSTESVENGLYPSSNKSNASSGAGKTNSQEAGRGSFMYGGAQVIGAAGAIGLAQGEQNFPGTPALLPVMQFGSQHPGGVGVPTVGMALPGYVAQQQMGMGNNEMTWLPLLTGAAGAFGGSYPPYIALDPAFYSRSSGQTSSSVPSRNLCYKGASPPRNDIVNEEVDQRQNKPRRQILRDELQSVKHHVINACLCWCHFTADSGVAFVA</aaseq>

Gene Sequence

<dnaseqindica>1..569#2235..2334#2560..2639#2796..3625#3745..3859#4370..4489#4994..5031#5127..5176#5265..5300#6120..6185#ATGGCCGACCCGACGACGCCGGCAGACGCGCAGCCGGAGCAGGCCCACGCCGCCGAGAAGCCCCCCGCGGCGCCGCTGACGCCCGAGGAGGCGGAGGCGGAGGCGGAGACGGCGGGGTCCGGGGATGACGAGGAGTACGTGAGCGACCCCGACGACGCGCTGCTCCCGGAGATGCGGCGCCGGGAGGCCAGCGACGACGAGGGGTCCGAGGAGGGGAGGGCGCGGATCGGGTCCGACCGCGGCGACGGCGACGACGGCGACGGGCAGGGTGCAGCCGAGGTGTACGAGGACGAGGCCTACGAGGACGATGACGAGGAGTACTACGATGATTTGGCGGAGGAGGAGGTCGGCGAGGGCTTCGAGGAGGAGTACGACGGCCGCGCGGAGCCGCCCAAGGAGGTCGCCGGTGCCCAGGGGGAGGATGGGGAGAAGGGCGACGTGGAGGGAGAGGCGGCGGTGGAAGGGGATGGAGAAGAGAAGAAGGAGCAGGAGCCGTTTGCGGTACCCACGTCCGGCGCCTTCTACATGCACGATGACCGCTTCCAAGAGGAGAGTCGTGGCCGCCGCAGGTGAGTTCTTCCTGAAAAACTTATGCCTTATCTGCTGTACCCATAGTTTTGGTAGAATTGCTATTGCTCAACCGTAGGCTGTAGCTGTGGCCTCGAGGAAGCCAGAGCTGCATTATACTTCAGCAAAGTAAAACGGGCATAATCAAAACGTAGTGAATCTGTGAATTGAGGCATCGATGCCAAAGGTAGGCGAGGAAGCGCAGGGGGATTTATCACATGCAATTCAGGCAAAAGCCTTTCACAAGAAAAAAACTGAACTTTAAGCTTAGTATAAATTTTAAACTTTGAAAATGAACTATGTAGAAAATGAAGGATATAACTTACCAGAGCATCTGAACTCATTTATTTTGAATATGTTGGGGTCGTCGTGCTCGAAACTAAAATCAACATAGTGATCAAGCTGTAAACTGATAAAATATCAGGAAACGTGAAAAGTTTGAATGAGGTTATAATGACAAATGATAATCCACAGTAAGGGTCCAGTGAAACCACTTTTTCAGGGAGTCCTACATGAAATATGTTCCTACAATGAAATCCAGGGACTCGTGCTAGATACTTGTTTGTTGGGAGCTAATGCAGACACATTTTCCCAACCTTGGTTCTTGCTATTACTTGTTTTTGACAGTAACTCAGATTTGTGTGTGCTTAAATTTTGATGCTTAAGATGCTGTCCTGGAGGTTAGCTACATAGAATTTTGTTTGTTCCTTCAATGCTAGGGTTTTAGTAGGACAAGAGCCAATGTTTATTAAGCATGTACTCTAATGCATAAGTTTAGCTAACACCGGAGAAGAAAAGAGGAGGTGTTGGGGGATTAGATGGGGCTGATTGTGAATTGAATAAATTCATTTTTTGCCATGAGATGGCCGTTATGAATACTCCTTAGAAATGCAATATGTAGGACATATTTTAATATAATGAGAAGGCTAATCACTGCATATTTAGTAGAACCTAAATGCCTAATGATCGTTTTTGGGCATAGAATGTTGGAATTTAGCTATAAGAAGAGTAAATTGTACTCATGGTGCATGGACTGCAAATAGGTGCAATAACCTACAAAACACTCATTTCGGTGCAACAACTTGCTTAGTTGATGCGGACTCGGGTCAAACAGGCCATAGAAGCAAAATGATTCCACATGGTGCTCACCGGTGACATGTCACTGTCAGCTTGCAACACACCTGTTGCAACCCATGATGGCAGGCTAGTAATTTCTATTTTGCAGAAAACCCCATAACCTGTAAATATCCACGGGCATTCATTAGAGGGTTTGTCACCCCCTCTATTTGATTCCATGATGATGAAAAACTGTGCCACATTGTTGGGACCAACATGGGAAGAGTGAGCTGCGAGCTTACCTTTTGTTTGTATGCTAACGATTTTCAATGTGCAATCAGCAATAGAGCATGTTCATCATTCTTCTTCCACCATATGTTTTAGCTTCCTGGGTCAATTATATTTTGCATCTCCTCTGCAAATGGATGCTCTGGTTGGCAAGCGTCTGCTAAATATATAGTAGCTACAGCTAATCTATTGAGCATCGGCTCATGTTGGTTATCGTTATATTTTGACCCTGCTGCAGTCTGTCATTGGATAGTAGTGGCTGCTAAATGAGATCTTGCTCTTCAACTGTGCTGATTTTGTTTTTTACTTTCTTCTGAAAGCAGGAGAATGTTTGGTGGGAGGAAGTTATGGGACGCTAAAGATGATCAAGCGTGGGTGCATGACAGATTTGAGGAAATGAATTTGCATGAGGAGCACTATGAGGTATCTGTCCAATTCCTTTAATGTGCAAATGATAGCTTTTTCTTCAATGTTAGTATTGAGGTAGGATTTCTGCATTGCAGGATAAGCGAATGTCAAGGGGTCTCTTTAGAGGCCGTGGTGGTGGGGGTAGAACTCGGTGCAGTGGTCATGGGTTTGCCAGAGGTGGAAAGTATCGCGGTTATTATGAAGATATCAACAATAATCAACAAAATCGACCCCTAAAAGGTTGTTAGAGGGAGAGGACCTCGACGTTATGAAGCTGTTGCAAAGAACAACCGAGATGTTGTTGGATTCCAGCGGAAACAGTAAGTGATTATTATTTTGAATCCTTCCCAACTACCCAACAAAAACACAATACTGCACACACCACTGGGGACACTTGACTGTAAATAGGTTTCATGGCTGCACAGCTTTGCTTGTGATTTTCGCCTTACATAATTATCTTATTATTACTTGTTCAGACCTGCAAGATCACGAGAGTCTGCTGCAAGTGCTTCAGCCGTCAGAGAGAGTGGCCAAACTTTAAATGCGCAGTCAGAAATGGCCCCTCCTAAAAAGAATGTTGTGAATTCAAGCTTAAATTCAGCGTCACCACCATTTTATCCCTCTGGTGCCTCCAACCCAGATTTCTCTGTGCCAGCTCAAAGAAGGGACAATATGCAAGCAGGGGGTTCCAATAAAGTCTTTCCATCTTCTATGAAGATGGATGACAATGCAAAGGTACAATCTGGCCCAGCAGTTAGAAGGGATTATGGTGCACGTGACAGGTTTCAACATGCTGATGGTCCTGTTAGACAATCTCCAAGGAGTGGAGGAACATCGTTGAATTCATCAGGATTTGCAGCATCGACAGTTAATCATGGTCAATCTTCTGTTGTTAGAACTCAAGGAGGAAATGGGATTCCTTCAAACAATCAGTCCACTTCGTCTCTTCACCAAAATCCTAGGGCTCCTACACACCAGCAAAGTCACACATCAGTCGTGCACCAGAAGTCAGGCCAAGTGCAAACTCAATCTGCAATGAGAATACCAACTCAGCAGTTGAACCATCGCACTGGCAACCCGTCAACCACTCAGCATCTACCTGTTAGATCAACTGAAAGTGTTGAGAATGGTCTGTATCCTAGTTCGAACAAATCAAATGCATCATCTGGGGCAGGAAAAACCAACAGTCAGGAAGCCGGAAGGGGTTCCTTTATGTATGGTGGAGCCCAGGTTATTGGGGCTGCTGGGGCTATTGGTCTTGCCCAGGGCGAACAAAATTTTCCTGGCACTCCAGCTCTCCTTCCAGGTTTGCTTCCTTAGTAATTCAACAGATCTTTTCTTGTAATAATCGGATTGCTTTGACTTTCTAATTTCCAATGCCATCACTTGAACTCATTGTCTTTCCTGTTTTCATCGTTAATGCAGTCATGCAATTTGGCAGTCAGCATCCTGGTGGTGTTGGAGTTCCTACTGTTGGTATGGCCCTCCCTGGCTATGTGGCTCAACAGCAGATGGGAATGGGAAATAACGAAATGACATGGTATATTTCATTGTCTCACTAGATTTGCTTTTCACAATAATATTTTCTGTGGTGTAACAACTGGATGTAATCTTAACTGCAAGGGGTGAATATAAGACAATATTACACCAAACAGTATTTTCACTTGTTCTTAGAATAGCACGTCTTGTTTTGATTTCTAGCTATACTTTGTCTAGCTTTTGTTTAATTAAACTATGATAGCAGGAATTGATAGTTGTTACAAATGCTTTTGTTTTATCTTTCAATATAATATGTTATGGGATTTTATAGCTGAAACTTGCTTTCCCAAGTAATATTCGCTCATAAACTCTTTTGGGGCGTCATTTTTGTTTTGTTGAAGATGTAATAATACCTTTCTCCTATTTATTTAGTTCTGATTTATTTTCCTATGGATTCCAATATGATGCTTTTGTTCTTTGTCTTTATAAACTATATACTGACTGTTGGGCCTTATTTGCATGATTTTTTATATTATTCTGTCTTATAACACATGAAATGTTGGTTTGGTAGGTTGCCACTGTTAACTGGTGCAGCTGGTGCTTTTGGAGGATCATATCCACCTTATATTGCTCTGGATCCAGCCTTTTACTCCAGATCTTCAGGACAGACCTCATCGTCAGTTCCTTCCAGGTAAAGGATATAATCGACAAATAGCTTATATACATGGGTTAAGCTGCTCTGGTTCTGTGGGAAAAGCGCCTCTTGGTGTAAACTAAAGTGCTGAACATCTGCTTTAGACTTAGCCATCTGACCATGTATGCATCTTCAAAAACATTATCACTTGTTTTGACTAGTGTTATTAGCTGCAAATGCAGTTGTGATAGCCCCCAGCTTGATATATGTACATTTTTGTATTTCAATTCAAAGTACTCAACTACGTACTGGTTCAGAATGTGTATGTATATTGATGAACTGATGAAGTGGATCACTCGAATGGCTAAAAGAAGTATTACTGTTGGATACACATTTGATTCAGAAATGTTAATATAAGAATGGGAATATACTTTGGAGGAATTTGGGCGCGATACATATAAAGGCATTAGTATTATGTAACCTACCTGGATCTGTGTTCTTGTATCATCCATGAATTTTCCTTTGAAAGTGGGAATTAAAAATATTTATTCATTCTTACAGGAATCTATGCTACAAGGGGGCTTCCCCTCCTCGAAACGGTACATCATACTACCTTTATTGATGTTGACTCTTATATTATATTACAATTTGTAAGTTGCTTCCATAAATATTTGGTTGACATTTTGCATTGCAGATATTGTCAATGAAGAGGTTGATCAGCGTCAGAACAAGCCTAGGAGGCAAGTATTCTCTAATAACATTTTGAATCTCACCTGGTGTATACTGTTTTCATGCCATGATTTTCAGCTCATGTATTTACTCCTTAATGCAGATACTCAGAGATGAACTTCAGTCAGTGAAGCACCATGTAAGGTGAATAGCATCTGAATAAGCTGCTTATGGTCAGTTATTTATATATTTGTTTGATATACCTACAATTTTCCTTATGTCCTGCAAACTTATCTGTGGTGTATGCTTATGCAGGCTATATTTTTAAGCCCTTAGTGATCTCCTGTTTTGATCTGGAGCACTTTGGGTGGCTTCTTGTCCTAAGTTATGTTAGGTACTGCCCTATTTTGACATTTTCAATTCCCTTACTAATTTGCACACAATATATTTTAGCAAATGGTATGCATTTGCTGCTCATTTTACTCCTAACATTAAATTTAAGAGTAAATTGCATTGGTGGTACACAAACTTTTCTGGTGGGTGCAATCTAGTGTATGAACTTGTAAATTTAACATCACTACATGCCCTATTTCATGAACGTCATTGTCTTTTTTACAATCCTTCTGTTTATACCTTAGCGATATGTTTGGATTGATTCCAAAGCATATTTGTAAGGGACAATGATTGTGAATGTTACACTAGTTTTCTTGATTTAGATGCCATTTTAGGTCATATAACAAAAAAGCATGCTGCTCCTATTAACTCCATATCATTATCCCTTTCTTTAACACTTCTACATGAGCAACCGTTACAGGGTATTTTGCCTCAAGAAATGACAATAGCATGTATTTTCACAACCCAGACACTTTTTCTTGGATCTAAATTATACTAGAGTAGTACTATACTCTCTAACCATTCTAGTGCACCTTTTTTCTTAACTTCATTGATAGGTATCTCTCCTTTTTTAGACAAACTGGTAAAAGCTGTCTGCTTTAACTTGATTTATACTGTTCTGAAGGTTATAAACGCCTGTTTGTGCTGGTGTCACTTCACAGCAGACTCAGGGGTGGCCTTTGTTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003893