Os08g0555300

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0555300| Description = Nonaspanin (TM9SF) family protein| Version = NM_001188767.1 GI:297726664 GeneID:9271128| Length = 3011 bp| Definiti...")
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Gene Name

Os08g0555300

Description

Nonaspanin (TM9SF) family protein

Version

NM_001188767.1 GI:297726664 GeneID:9271128

Length

3011 bp

Definition

Oryza sativa Japonica Group Os08g0555300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27882270..27885280

Sequence Coding Region

27884074..27885045

Expression

GEO Profiles:Os08g0555300

Genome Context

<gbrowseImage1> name=NC_008401:27882270..27885280 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27882270..27885280 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggctcaagtggaaaccgggtggaagcttgttcatggagatgtgttccggcctccatccaaccctgtcttgctctgtgcctatgcagggagtggtgttcaactctttggtactcatcaccgtagccttcgctgcgctgggcttcttttctccatcaaattctgcaggcctgagaaatgttgtgttgctcacctgggtcctgatggggatgcttgctggctacacctcttctcgcctctataagatgttcaagagcggttcagagtggaagcatatcaccatggcaacagctatccagttcccgggtttcgcttttgttatcttcgcaatcttgaatactcttctacaagatgagaattcatcagccacagttcctccaaccacaatgtgtgccttggtcctcctctggtccggtatcacgccgcctctcgtgtttcttggaggatatcttgggtacaagagacctgccattgagcctccggtggagatcaacaaaactccacgaaagattcccaagcaagcatggtacatcagccctgtgttctccatcctcattggtagtatctttccatttacaattgttttcattgagctcttctttggcctcatcttcatctggtatcaccaattctaccgtggatttgggttcctcctcatcacgcttgttctactcctcgtcgcctgcgctgaaatctccgttgcgttttgctactatcaactgcgaagcggcaactacaagtggtggtggagatcattccttacaccaggatgttctgcagtctatctcttcttatatgcgacattcttcttcttcgcgaagctgagcattgttaagccagtgtcagtcatgttctactttggatacatgcttgtcgtctcatatgccttcttcctgcttacaggcacaattggtttcttctcttgtttcttcttcacgaggtttatttactcacagagggcatttggatga</cdnaseq>

Protein Sequence

<aaseq>MRLKWKPGGSLFMEMCSGLHPTLSCSVPMQGVVFNSLVLITVAF AALGFFSPSNSAGLRNVVLLTWVLMGMLAGYTSSRLYKMFKSGSEWKHITMATAIQFP GFAFVIFAILNTLLQDENSSATVPPTTMCALVLLWSGITPPLVFLGGYLGYKRPAIEP PVEINKTPRKIPKQAWYISPVFSILIGSIFPFTIVFIELFFGLIFIWYHQFYRGFGFL LITLVLLLVACAEISVAFCYYQLRSGNYKWWWRSFLTPGCSAVYLFLYATFFFFAKLS IVKPVSVMFYFGYMLVVSYAFFLLTGTIGFFSCFFFTRFIYSQRAFG</aaseq>

Gene Sequence

<dnaseqindica>1805..2776#agtcagttattgcggtccacccaggggtcaacggtcaaccacgtatgtcgtggccagagaaaaccaatgcagaaggccgtctcctccgtcgccgtcgctgtcgccgccgtccgccggccaactcgtcgttgtcatctcccagcacttccggtatcatatatgagtgaggcttagtgcttctccctcctcaacgtcaccgccggccgactcgccgtcgtacgtgaggctttatggtgcgtggtggcggcggtggccgcgctgctcgccgcgccaccggtcgcagctgtgttcatccacgaattctacaaggtactgaatctgatacgctctacatggtatctgtctcctttggaattgatctgctgaacattaattggtctaatcttctgaattgtttgctttgtttcttgtgttcattttcacagggagatgaggttttggtgaagatgaacgagctgatgtccatcgagactcagatcacctactcgtactactcacttcccttctgtagacctgacaatctaactgaaagtgctccgactctttggcaacttctccatggtgatcgccaacagaggtccccttaccaggttagtcacacactgccacctgccagggttttatcttgggttctatcattttttttttgtctgtgaagatcttggattatcatttttggactgcgaattgatgatccaactttgcgttttcactgtagtttgaaatgagagtgcccaagaagtgccaaattgtctgcagagtgcttgttggagaaaaagaagcgaaggagctgacggagaagatggaagatgagtaccgtgtgaacatgtaaggattgtagaggttagatttacattttctaaaaacaccgcaaagtttgtgagagatttaatgaagttgaattacagggctcttgacaacctcccattaagtattccaatcagaaggatagataaagatgattttttctatcagcatgggtaccatattggtgtaattggccaattctttggagtgggttcatcttctcaaaactctttttttagatgaaagatcattatattgatcttctcaaactctttatttcgctaaaatctttagttaaaaagaccctcatgcataagcatttttccgcaggaggagcataagaggtacttcatccacaatcacttatcatttttggtgaggtacaagagggatatcgacacaagtgcttctacaatagtggcgtttgaggtcaaaccattcaggttttgccaactttgcttcccacattttattcagcatgaatgagtaccatctttaccgttcttctggttaatttccttttgtcccagtgttaagcaccaatatgaagcgcaatggaacggtgcaaactctcgtctgagcacatgtgatgctaatgccaacaggttcatcttatcctctgattctccaccggagattgaagtcggtgaagaaatcatattcacctatgatgttaactttgaggtggctttcatccttcccttttatcatcctttcacctgtaaattgtatcttctccctaaaacagacattaatcagatattaaacctttctctaatgatttatcacatgcttgtgctactgctgttacaggaaagtgatatcaagtgggcttctcgctgggatgcctacctgtcaatgacagatgatcaggctcgctggttttccattgttaactctcctgttaccctgattggtctttctgttgcaatggccatgactatgcttcgaagtctgcatagagatatctttagatacagccaacttgaaacccagaatgaggctcaagtggaaaccgggtggaagcttgttcatggagatgtgttccggcctccatccaaccctgtcttgctctgtgcctatgcagggagtggtgttcaactctttggtactcatcaccgtagccttcgctgcgctgggcttcttttctccatcaaattctgcaggcctgagaaatgttgtgttgctcacctgggtcctgatggggatgcttgctggctacacctcttctcgcctctataagatgttcaagagcggttcagagtggaagcatatcaccatggcaacagctatccagttcccgggtttcgcttttgttatcttcgcaatcttgaatactcttctacaagatgagaattcatcagccacagttcctccaaccacaatgtgtgccttggtcctcctctggtccggtatcacgccgcctctcgtgtttcttggaggatatcttgggtacaagagacctgccattgagcctccggtggagatcaacaaaactccacgaaagattcccaagcaagcatggtacatcagccctgtgttctccatcctcattggtagtatctttccatttacaattgttttcattgagctcttctttggcctcatcttcatctggtatcaccaattctaccgtggatttgggttcctcctcatcacgcttgttctactcctcgtcgcctgcgctgaaatctccgttgcgttttgctactatcaactgcgaagcggcaactacaagtggtggtggagatcattccttacaccaggatgttctgcagtctatctcttcttatatgcgacattcttcttcttcgcgaagctgagcattgttaagccagtgtcagtcatgttctactttggatacatgcttgtcgtctcatatgccttcttcctgcttacaggcacaattggtttcttctcttgtttcttcttcacgaggtttatttactcacagagggcatttggatgaacttgagattagaattttggaattggaattagaattctgctgtgattgtaactccagtttgttacagtcacctctgtgtcctggaacaggagagcttgtcaatggcaattccattccagttattccaagtcccagtgataattttttttccaagctaaacatgaagatgatagtatagcatgtgtgctactatgtcatttctggttttgaatgttgagatgtgtatagtttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0555300, RefSeq:Os08g0555300