BGIOSGA004017
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA004017 |
|---|---|
| Description |
cDNA, clone: J100088L22, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA004017, complete gene. |
| LocusTag |
P0501G01.10 |
| Ensembl Transcript ID |
BGIOSGA004017-TA |
| Ensembl Protein ID |
BGIOSGA004017-PA |
| Length |
3864 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:27905598..27909461 |
| Sequence Coding Region |
27905598..27906264,27907181..27907324,27907410..27907562,27907883..27907998,27908082..27908249 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:27905598..27909461 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:27905598..27909461 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGCAACCGCACGTCGCGCCACCACCGCGCCGCTCCCGAGCAGCCGCCGCCCCAGCCCAAGCCGAAGCCTCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGTGGCCGAGGCCGCAGCAGCCGACCCCGCCGCCGGCGGCGGCGCCGGACGCGGCGATGGGGAGGGTGCTGGGGCGGCCGATGGAGGACGTCCGCGCGACCTACACCTTCGGGCGCGAGCTCGGGCGGGGCCAGTTCGGGGTCACCTACCTCGTCACCCACAAGGCCACGGGGAAGCGCTTCGCCTGCAAGTCCATCGCCACGCGGAAGCTCGCCCACCGCGACGACATCGAGGACGTGCGCCGGGAGGTGCAGATCATGCACCACCTCACGGGCCACCGCAACATCGTCGAGCTCCGGGGCGCCTACGAGGACCGCCACTCGGTCAACCTCATCATGGAGCTCTGCGAGGGCGGGGAGCTCTTCGACCGCATCATCGCCAGGGGGCACTACTCCGAGCGCGCCGCCGCCGCGCTCTGCCGCGAGATCGTCGCCGTCGTGCACAGCTGCCACTCCATGGGGGTCTTCCACCGGGATCTCAAGCCGGAGAACTTTTTGTTCCTCAGTAAAAGCGAGGACTCGCCGCTCAAGGCCACTGACTTCGGTCTTTCCGTTTTCTTCAAGCCTGGGGAGCATTTTAAGGACCTTGTTGGAAGTGCATATTATGTTGCACCTGAGGTGCTGAAACGAAACTATGGAGCAGAGGCTGACATATGGAGTGCTGGCGTTATTCTTTACATCCTTCTTTCTGGTGTTCCACCTTTTTGGGCAGAGAGTGAAGATGGTATATTTGATGCCGTATTACGTGGTCACATTGATTTCTCGTCTGAACCTTGGCCTTCGATATCCAATGGTGCAAAAGATTTGGTTAAGAAGATGTTGCGGCAAGACCCAAAAGAGCGCCTTACTTCTGCTGAAATTTTGAACCACCCATGGATTAGAGAGGATGGAGAAGCCCCAGACAAGCCACTTGACATTACAGTTATCAGCAGGATGAAGCAGTTCAGGGCAATGAACAAGCTTAAGAAAGTTGCATTGAAGGTTGTTGCAGAGAACTTGTCAGATGAAGAGATTACAGGCTTAAAAGAAATGTTCAGATCCTTGGATACTGATAACAGTGGGACAATAACTCTTGAGGAGCTAAGATCTGGTTTACCAAAACTTGGCACCAAAATTTCTGAATCAGAAATTAAACAGCTGATGGAGGCGGCTGATGTTGATGGAAATGGAACCATTGACTATGCTGAGTTCATATCAGCGACAATGCACATGAACAGATTGGAGAAGGAAGACCACATACTTAAAGCATTTGAGTATTTTGATAAGGACCACAGCGGATACATAACAGTAGATGAGTTGGAAGAAGCTCTGAAGAAGTATGATATGGGGGACGATAAAACGATTAAGGAAATCATCGCTGAAGTAGATACTGATCATGATGGAAGAATTAACTACCAGGAGTTTGTCGCCATGATGAGGAACAACAACCCTGAGATTGCTCCCAACCGGCGGCGCATGTTCTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MGNRTSRHHRAAPEQPPPQPKPKPQPQQQQQQQQWPRPQQPTPPPAAAPDAAMGRVLGRPMEDVRATYTFGRELGRGQFGVTYLVTHKATGKRFACKSIATRKLAHRDDIEDVRREVQIMHHLTGHRNIVELRGAYEDRHSVNLIMELCEGGELFDRIIARGHYSERAAAALCREIVAVVHSCHSMGVFHRDLKPENFLFLSKSEDSPLKATDFGLSVFFKPGEHFKDLVGSAYYVAPEVLKRNYGAEADIWSAGVILYILLSGVPPFWAESEDGIFDAVLRGHIDFSSEPWPSISNGAKDLVKKMLRQDPKERLTSAEILNHPWIREDGEAPDKPLDITVISRMKQFRAMNKLKKVALKVVAENLSDEEITGLKEMFRSLDTDNSGTITLEELRSGLPKLGTKISESEIKQLMEAADVDGNGTIDYAEFISATMHMNRLEKEDHILKAFEYFDKDHSGYITVDELEEALKKYDMGDDKTIKEIIAEVDTDHDGRINYQEFVAMMRNNNPEIAPNRRRMF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..667#1584..1727#1813..1965#2286..2401#2485..2652#3269..3396#3486..3585#3778..3864#ATGGGCAACCGCACGTCGCGCCACCACCGCGCCGCTCCCGAGCAGCCGCCGCCCCAGCCCAAGCCGAAGCCTCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGTGGCCGAGGCCGCAGCAGCCGACCCCGCCGCCGGCGGCGGCGCCGGACGCGGCGATGGGGAGGGTGCTGGGGCGGCCGATGGAGGACGTCCGCGCGACCTACACCTTCGGGCGCGAGCTCGGGCGGGGCCAGTTCGGGGTCACCTACCTCGTCACCCACAAGGCCACGGGGAAGCGCTTCGCCTGCAAGTCCATCGCCACGCGGAAGCTCGCCCACCGCGACGACATCGAGGACGTGCGCCGGGAGGTGCAGATCATGCACCACCTCACGGGCCACCGCAACATCGTCGAGCTCCGGGGCGCCTACGAGGACCGCCACTCGGTCAACCTCATCATGGAGCTCTGCGAGGGCGGGGAGCTCTTCGACCGCATCATCGCCAGGGGGCACTACTCCGAGCGCGCCGCCGCCGCGCTCTGCCGCGAGATCGTCGCCGTCGTGCACAGCTGCCACTCCATGGGGGTCTTCCACCGGGATCTCAAGCCGGAGAACTTTTTGTTCCTCAGTAAAAGCGAGGACTCGCCGCTCAAGGCCACTGACTTCGGTCTTTCCGTTTTCTTCAAGCCTGGTGCGTGCTCGAGGCTTCACTATCTCATTACAGAGGAATGGATCGCGAGATATTTCATTGTTCCAGTGTTTGACTTCATGAGGATTTTGGGTTTACTTAGATCGAGTTGTTGGGTTTGACAGGTCTGAAAGTTTCACCGTTACTAGAATTAGGGGCTAGATGCAACGCTGCAAGTGCCATTATGTTTATACTTATAGATGTTCCAGATGCAGTGTTCTAGTTAGCATTGGATCCATCCACCTTACTCCACTATAGCTTGGGCAATCTCTGTGTTTGCGTTTACCGAGATGGCATTGTACATTTGCATGATTTGCACTTTAGGCACTGGATATTTTCCCCACTGGTAGCTAAATGCTGGCGGCATAGCATGCAAGATCTTCAAAAATGCACTCAGCAATATCAGAAATGCCATCTGAACTTAGTGGGTGAAGCTTGACTCTTCATTATGCAGAAATGTTGGTGACGGTGGAGGATTTTGTTGTTTTAGTGTTTTTCTTTTACAATGATGGTGGGGGATTCTTCATTCTGAACTTGGCTTTATTTTTCTTACACTTGGCATGTGCAAACTGAGTGCTATATGTCCCGTAGGGCCTCGTTGCTAAGTGCTACAAGATCTATTGCACTGGAACTCGTGGTTATGGACCCGAATTCTTTAGTATGGAACAATGTCTTTCCAGGTAAAAACCCCCAGTATATGAAAGAATGGAAAGGTGTTTTCGTTCTTTTCTTGTGGAATAAGAAGCCTCATACCTTAGTGGAAGGAAAATAAGATTTTTTTTTTTCAATTAGGTATTTGACCAAATAGGATCGTCTGGTTCCTATAGAACCTACCACTAAAATACCCAATAGGACTAAGTGGAACGAAAAGGATTTTCCTTGAGATGGTAAATGAAAATGCCTATTGTGGATGTTGCAGGGGAGCATTTTAAGGACCTTGTTGGAAGTGCATATTATGTTGCACCTGAGGTGCTGAAACGAAACTATGGAGCAGAGGCTGACATATGGAGTGCTGGCGTTATTCTTTACATCCTTCTTTCTGGTGTTCCACCTTTTTGGGCAGGTGAGGTGACGTTTGCCGCTTCTTATTTCAGTCAACTTTTTTTGCTTCTGTTGCTAACATAGATGTTCTACCTTCATTTTTTCAGAGAGTGAAGATGGTATATTTGATGCCGTATTACGTGGTCACATTGATTTCTCGTCTGAACCTTGGCCTTCGATATCCAATGGTGCAAAAGATTTGGTTAAGAAGATGTTGCGGCAAGACCCAAAAGAGCGCCTTACTTCTGCTGAAATTTTGAGTAAGTCCACCATAGCTCTTTAATGGCATTCTTATCAACAGAAAAATGCACACTTGTCTAGTAGTTCAGTAGCAAATTGAGATCAAACAATTCTTCTGGTTTCTTCCTATTGTACTTTTTCATGCAAAAGCCTTGACCTGTAGCTAGTAGTTACTGTAGTATCTCAGAGCCAAGACGCTCACTTTTACTGTCCCATTTTTTTTAAAAGAGTATTCGGGTCTTTTTAATAGATAATTTCTGCTCTTGTTTCTATATAAACCGAGTTATCATTTTTACTGTTTGCAAATATAGTTAATGCACCTAATACTTTAAATATACAGACCACCCATGGATTAGAGAGGATGGAGAAGCCCCAGACAAGCCACTTGACATTACAGTTATCAGCAGGATGAAGCAGTTCAGGGCAATGAACAAGCTTAAGAAAGTTGCATTGAAGGTGTCTTCTGAGTATTTATTTTCGCTGCTACCAACTAGTATTGCATCATTAGATAATTCTGACCCTTTTGTTTATAAAACTAGGTTGTTGCAGAGAACTTGTCAGATGAAGAGATTACAGGCTTAAAAGAAATGTTCAGATCCTTGGATACTGATAACAGTGGGACAATAACTCTTGAGGAGCTAAGATCTGGTTTACCAAAACTTGGCACCAAAATTTCTGAATCAGAAATTAAACAGCTGATGGAGGCGGTATGTTTTTGCTCTGCAGGCAGACACTTGAGCTTTCAATTGATTTTTTTTTTAGATAATGGAATATTAATATCCCAGTCACTGCACCCATAGATGCACAAAACTATAATCACTTATTACAAGTTTTCCACAGAAAGCGAAATAAATTAAACATAAAGCAGCATCCTGCCGAAGTGTTTGGCCTTTACTTCGGAGCGCCCGCTCATGGCTTGGTTTCCTATCGCTCCTATGTAGTGGTCGGCCTTAAAAGTATCTTTGGACTCTGGCAATCATGTGTTACTGCGGAGCGCCTATCGCGTGCACGTGCGCGTGCACGGCGAGAGAGAATACTAGTTATGCTTTGCCCAAAGGGACCGGAACAGTCTAGTCTCTAGCTACCTAGCTTCGGCTATTTCAAGTGCCTGCTGAGCTTCTTCCGGATCAATCTTAGCAGCTGATCCTACTTAGAATGAAGCCACATTAAGCTTAATGTAGACTGAGACAGTAACAAGATGCTCATTTGAAAGGAATGGTTATATGGAAGAATTTGAGTATTTGGCAGTAGCATGTATACACAACTGTTCTGGTGGTTCCAGCACATGCCATCATATCATTATTTCCTTGTTTTCCCAAACAGGCTGATGTTGATGGAAATGGAACCATTGACTATGCTGAGTTCATATCAGCGACAATGCACATGAACAGATTGGAGAAGGAAGACCACATACTTAAAGCATTTGAGTATTTTGATAAGGACCACAGCGGGTAACTTCAAATCGATTTTTTTTGGGTCTTGTTCTATCTGTTGTTTGTTAGTTCTCATTAATTTGCTAATTTTAAATCTCTCTGAGCAGATACATAACAGTAGATGAGTTGGAAGAAGCTCTGAAGAAGTATGATATGGGGGACGATAAAACGATTAAGGAAATCATCGCTGAAGTAGATACTGATCATGTAAGTATATTCTGTAACACATCTTAAAGCAAGCTCTTTGATAACAAAATGTGCATGTCCCAACCATCCTACAAGGAGAATGCCAAAAATTTCCAATCCTAAAGTACCTTTCTTAAGTAGAATTTGAGCTCAAACACAGGCTGCGAGGCCCATTTATTACAGTGCTAATTTTTCCATTTTTTGTTTTCACAGGATGGAAGAATTAACTACCAGGAGTTTGTCGCCATGATGAGGAACAACAACCCTGAGATTGCTCCCAACCGGCGGCGCATGTTCTAA</dnaseqindica> |
| External Link(s) |
