Os08g0557000

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0557000| Description = Similar to Protein-L-isoaspartate O-methyltransferase| Version = NM_001069015.1 GI:115477768 GeneID:4346293| Length ...")
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Gene Name

Os08g0557000

Description

Similar to Protein-L-isoaspartate O-methyltransferase

Version

NM_001069015.1 GI:115477768 GeneID:4346293

Length

2642 bp

Definition

Oryza sativa Japonica Group Os08g0557000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27965381..27968022

Sequence Coding Region

27965574..27965579,27966137..27966410,27967000..27967164,27967600..27967850

Expression

GEO Profiles:Os08g0557000

Genome Context

<gbrowseImage1> name=NC_008401:27965381..27968022 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27965381..27968022 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcaccgactgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacgggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttgtgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccaccatttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctggcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcagttggtgttgaacatatcccagagttggttacttcgtctattgaaaacatcaagaaaagtgcagcggctccacagttaactgatggatccctcagtatacatattaccgatggcagagaaggttggccagagctcgcaccctatgatgccatccatgtcggagctgctgcaccgcagattccacaggcgttgattgagcagctaaagcccggtggcagaatggtgatcccagttgggactatgttccaggagctgaaagtggtggacaagaaccaggatggcaaggtcagcataagagatgagacggctgtgcgctatgtgcccctcacaagcaaggatgcgcagctgcaggctaactga</cdnaseq>

Protein Sequence

<aaseq>MEHRLWSSGASDKNKAMVEQLQRYGIIKSSKVAQVMETIDRGLF VPPGASPYFDSPMPIGYNATISAPHMHASCLELLEKHLQPGMRALDVGSGTGYLTACF AIMVGPEGRAVGVEHIPELVTSSIENIKKSAAAPQLTDGSLSIHITDGREGWPELAPY DAIHVGAAAPQIPQALIEQLKPGGRMVIPVGTMFQELKVVDKNQDGKVSIRDETAVRY VPLTSKDAQLQAN</aaseq>

Gene Sequence

<dnaseqindica>194..199#757..1030#1620..1784#2220..2470#cccccaccaccaccgccagccaccagccactgccgcggcgggaatccggttcccgcggcgacatcccccacgtctccgccgctgcaccggcaaaggcagctgcaccgcgacccacccgcgcgctcccaatcggccccaagattaagattaaaccaggagagaccacccgatcgagtgttctctcactttcgccatggaggtactccgctacatcttttcctgcttctcctcctcctcctccaaatcatcctcagcatctgcgggctccgtgagtatcttctttaattgctagtacgtaattgtgattttactgtgcttaattgttgatccagtcctaataaggctatattactcgctagtctgagttcttgtggtactagtaattagcgaaattatggggagagttctccataatttaggctaaaaccttgtcagttattgttaattctaatcaccaccggcagcctgattccaacatttgattatggacttacaacgaattgaattagaattttatgccgactgttaattgttactagttcctttgtacctttgggatatttgatgatgatcttgattcacataagataagataatctacaacaaatttcagtgtatgtgccaaccatagttgtcgagtgccatttagagcgttgaaggggattgatttcaatctcatatgcctcatctctcatgttgctgtttttctctgggaagaaccgtttcatgttgctcctggtgctgatactgttgcagcaccgactgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacgggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttgtgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccaccatttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctggcatgcgtgctctggatgttggatcaggtctcccgtatctcatatattcagtttcgctcaatcacttcaacgttttatctatgctcctaaaatatcatttcaattatgtatcatcacaacagaaacacttttgagttttgatgttctcattcacaaaactatgttatgaatcttaagtgccaaaatatagaattgcttttgtttttgagttacaacttcaactataggtttatcattacccaagatctgtcagtggagtagtatcttatctaatagatgtacttatcactgcacactttaggctttgaaatgcagaaatgtttgccaacatatgtggaaaaaacaatatttagcttcatctcacagcttttccgtgagggtatgtattcatgtggtctatgatgggctggcccctaccctataccacaaagattcagtagtaatgttggtttctttcatctttttttctgtcatactgatttatggaattaaatattgattcaggactgccgacctgtttaatatttcctagctgaaatgctcaacagatagcaaatttctatacatgtttgtcaactcgcattgcttatttacgtatctttgataacttcaacaggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcagttggtgttgaacatatcccagagttggttacttcgtctattgaaaacatcaagaaaagtgcagcggctccacagttaactgatggatccctcagtatacatattaccggtaagtagcgcaagtttgcagcttttaattgttcactttcctctccactagtagtaatgacaaacatgctgaagtgccaaggtctgaactgaattgcagcgtagagtacaattttgtagacaagggcttagttgcaagggttaaatgatactttaaataaacatgttgaacttctgtaatttgttttaaagggttacttttgtcgggtctaacgtggtaacaagttgttttaggtttcaaagagaatctttttatccataccaaacagtgagtggttcttcatctgtgatacttatgctttctagacacagacttggagcaactttgcccatccatctcataaacttatattgtgcatccgggttggcttcagcagtacttcatattccaaaacattatttacctaacaataatcgatctctgtaactgatacagatggcagagaaggttggccagagctcgcaccctatgatgccatccatgtcggagctgctgcaccgcagattccacaggcgttgattgagcagctaaagcccggtggcagaatggtgatcccagttgggactatgttccaggagctgaaagtggtggacaagaaccaggatggcaaggtcagcataagagatgagacggctgtgcgctatgtgcccctcacaagcaaggatgcgcagctgcaggctaactgaatgcactaccataatattctgctgaatgtaaaaccttcaatgcgtgatcccagttacatcaagatgttattattgtacataaattggtcctaccgtatgtgtgaatcgcttggtgcttgtcaacaatgttggatgttggttcgtcatgaagcatggaagtatgtgcttgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0557000, RefSeq:Os08g0557000