Os08g0558000

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0558000| Description = Similar to 60S ribosomal protein L10a-3| Version = NM_001188769.1 GI:297726668 GeneID:9268245| Length = 2355 bp| De...")
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Gene Name

Os08g0558000

Description

Similar to 60S ribosomal protein L10a-3

Version

NM_001188769.1 GI:297726668 GeneID:9268245

Length

2355 bp

Definition

Oryza sativa Japonica Group Os08g0558000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28017368..28019722

Sequence Coding Region

28018660..28018785,28019126..28019326,28019458..28019511

Expression

GEO Profiles:Os08g0558000

Genome Context

<gbrowseImage1> name=NC_008401:28017368..28019722 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28017368..28019722 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaagatgaacaagaacaagaagcttgtgaagaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagatcccccgtctccttggtcctggtctaaacaaggcaggcaattccctacattggttactcaccaggagtctcttgaatccaaggtcaatgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcgatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaagaagaactggcagaatgtgaggtgcctgtacatcaaaagcacaatggggaaaccgtacagggtgttctaa</cdnaseq>

Protein Sequence

<aaseq>EDEQEQEACEEACQEVPCFLSIRGHHQADPPSPWSWSKQGRQFP TLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSL LKKNWQNVRCLYIKSTMGKPYRVF</aaseq>

Gene Sequence

<dnaseqindica>1293..1418#1759..1959#2091..2144#ccctcttcgcctctcctccgccggcgccgcccctgcccaaaccctaggtgaggtctctctctccgtctccggccgcctccctcctcgatccgcaacctcacctcttccgattgtttgattgtattgtctttacgcgctgtacctcgcttcttctcactagttttttttttctgattttattctactgcagagtgttgttgagttatcggccgcaaacatgaggtactctactcctcccaacttgcttactgattagttgttttcgttgatttagtctggtagtagcattgctttgggggatactggtgtcatagatcgtttcttgttagacagttgaatgcttttatttttcaaaaaaaataaatctaagatagaccttagagggatccagtagttttataatttggaggaaaaggtctttagtttatgccgaatttcatacatagaccttcagagtggcatcaagagccaaagagggatccagtagttgtatatagttatcaacaaaggtgactacttgatatatcttttttgtagcattgcttatgtaactaagcactgggttgcatcataaagaatgttttatttgcctagtaaacagtagagatggctgatttctagattataccagagtatggtgcactgattgatgagtatcagaaatgttctttcttttccataacaaattctgaatgtgagcttgtgcgatcaattgcagtaagttacaaaccgaggctctcaaggaagccatctcccaggttgttgctgattgcaaggaaaagaacaggaagttcaccgagaccgttgagcttcaaattggtctcaagaactatgacccacaaaaggacaagcgtttcagcggctccgttaagctgccccatatcccccgccccaagatgaaggtctgcatgcttggtgatgcccagcatgtcgaggaggtaagatatgatgttgtagccattttgtttaattcagactttacaggttacattattgtagtattttctcaatttgaacacatgtagtgttactgaattaccatttcttaaaatgtggttgtttgtttccctggtgcttatttctttacatgtcaacatatgttatactcaatttcgttagcatctaatgtgtttggttgtatgcaatttggatttttctctctgtaatatctgtctttattctgtctaatggtactgtttctccctaattttcttcctactaacatgctgcaccatggcatttaaacaggctgagaagattgggctcgactacatggatgttgaggcccttaagaagatgaacaagaacaagaagcttgtgaagaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagatcccccgtctccttggtcctggtctaaacaaggcaggcaagtcttccattttctgacatgcttgctcttcttttcatgatctttgttttgaatacctgttttttcatgtacttgtatgcacatttcaattttttgggctcccggcaatggaattgatcaaattattgtgcatgtgttgcaaggaccactatctttatatgttaagtaaatttttcggctgctgtttggctttctgaacacaccatagtacatacattaagctggtatcttgtttaaagtactgttagtgttgtgtgctcttgattatgcacacttttgccatgtatggtctactagcaccgctctgctaactgggtcatgtcgttggctctgcaggcaagttccctacattggttactcaccaggagtctcttgaatccaaggtcaatgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcgatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaagaagaactggcagaatgtgagttctgttctcaacttcatggcatcagtagtttacatttctgatgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcaggtgaggtgcctgtacatcaaaagcacaatggggaaaccgtacagggtgttctaagctggtttgctccacattgaagctgataagatgctgggcggttgaactgagcttgtccttacattagatctgcttgcactgatatcagttttgtgcttacccaagagaacatcgagatatgttatcatattttgtagtagtttattcagtgcacttcggatttatgcaaatgaggcttgtgttatttatgaatagtttcgttcatggggag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0558000, RefSeq:Os08g0558000