Os08g0558700

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0558700| Description = Conserved hypothetical protein| Version = NM_001069031.1 GI:115477800 GeneID:4346310| Length = 3523 bp| Definition ...")
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Gene Name

Os08g0558700

Description

Conserved hypothetical protein

Version

NM_001069031.1 GI:115477800 GeneID:4346310

Length

3523 bp

Definition

Oryza sativa Japonica Group Os08g0558700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28047505..28051027

Sequence Coding Region

28047665..28047974,28048119..28048380,28049265..28049354,28050900..28050942

Expression

GEO Profiles:Os08g0558700

Genome Context

<gbrowseImage1> name=NC_008401:28047505..28051027 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28047505..28051027 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtaccacccgacgagaggcggcgtccgcggcggacgggatcaattcaaatgggatgatgttaaggttgacaagcaccgagagaattacctcggtcatagcattaaggctcctgttggaagatggcagaaagggaaggacctgttctggtatacaaaagataagaaatctgactcagaagatgctctcaaggaagaaatcaggagagtgaaggaagaggaggagcagtccatgcgggaggcacttggcttagttcctaagcgtagtagtcgacctaagggcaaccgattagataagcatgagtacgcagagcttattaagcgaggatcaactgcagaagacttgggtgctggacatgctgaagcagcacaagtgcagggtctaggtttatacaagggtcctcgcagagaggaagaatcgagctcctttaaccttgatcctccagaaatggtgcccgctgagcaggctgacaaccctccaccggaaaccaaaccggaacgtgaagattccgatgatgatcgtaggagcaaaagggggcgtgaggagaggggaggggagaaagagcggaagcgagaaaggcactcggaaggaaaggagaggaggcgtgacaagcaagagaagaggagtcggcatgagtcggacgacaggtcgaagcgccaccgcaaagacaagcacaagaggaggcatgactctgattccgactag</cdnaseq>

Protein Sequence

<aaseq>MYHPTRGGVRGGRDQFKWDDVKVDKHRENYLGHSIKAPVGRWQK GKDLFWYTKDKKSDSEDALKEEIRRVKEEEEQSMREALGLVPKRSSRPKGNRLDKHEY AELIKRGSTAEDLGAGHAEAAQVQGLGLYKGPRREEESSSFNLDPPEMVPAEQADNPP PETKPEREDSDDDRRSKRGREERGGEKERKRERHSEGKERRRDKQEKRSRHESDDRSK RHRKDKHKRRHDSDSD</aaseq>

Gene Sequence

<dnaseqindica>3054..3363#2648..2909#1674..1763#86..128#aaaggaaaaaaacctccactacgcaaatcgtcgtcgtcttcctccgccgaattccccaccccaccggcggcgcgaccgggcggagatgtaccacccgacgagaggcggcgtccgcggcggacgggatcgtaagctctctccttctcctacctttcccaaatccactcgccgtgagatctcaatcgctggctgcgggccctaattctgccgcgtaatttttttacttccgtgaaacactcgctagggtttcgatgctgttgctagggactcgctgtggctgtaaggttctagttgttgatttgtcgatgctccttcctcgcgtttgattgcatctcgtccggtcttacttgttggttccaactcgtccgtgttgcactggattcgattagctagttcgtctcttgtgtctatgtggttagtgcgtaggatcttaccttccaactcatctgtttgcttgtatgatcttgcatcaggaggaattctgtgtctgccatattgttattgaatcatgttcctttgaaaggttataagatggaaactgcacatggcgcggtcacgcacgtatgcctgcccgcattcagcacccttcggcacgcgtgttcacctttatctcttctctatccaattgataccaagttcctcattggtatccgacattgttttttagtttaaaaacaatggtcataagatgaatggatgaccccattgcaagggatcctcgtgtgacagactgacagtcggatcatcaagggacaacaactactggggttacaacgtactgctgccaaaattaccttaatgaatggtggcatggcaataccagtcatcaggatgaaacatgacactataaaattagtattagcacttctatatgctggatgtatgagctttccaaaatttacacgagtttttcaacttctgtgggcatatattatggatatgcatttgtttgctgcaatgtacggcacttattaatgtgctccgagctctaggatatcatgaatatagctctaggatatcatggaatattcagttttactctctgtatttcgttgtgttttatgctttataatgctaaggttcatcctcatgctgaatgagcaaaaagctgctagataactacaagatacaatgaggtgagaaaatgatccaaattacattgattacaattgctgcatctgaaagagaaaatcatcactttttttttggggggggggggggttcatttataggcttgtactatataactactttgtatatgataaactcactagattatcatcacttatgggcatcatcggtgccctaattgtataaccttatgcttactattcaactttacaagcgctataaataatgagtgcagcccgttagctcctccaattgcacctgtggttcttcattttgtactatgaacataaagctaccttttctcaaacagaaaagcgtgcactggactactcctacacctgccaacatgaataggcctacattttgatcgtttgtttttgctataagctcttctacatgttgttctgttccactgccattgtgtcatctccatcttgcactttgcattgtagcttacgagcttttttgttatatgggttgaacatacaattattagaaaagctcagtaaatctaaatacttttctccttttgttccttgcagaattcaaatgggatgatgttaaggttgacaagcaccgagagaattacctcggtcatagcattaaggctcctgttggaagatggcagaaaggtaaatataacaataccccttgtttacatccacctttgttggctggctagtccttataaaacaatggttttttactgctcgacatgaagtggtttttcttcttcttcttcttcttcttttttatgtcacatggtctaattaaattgttaaaaatatcttatctcttactgtagtttcctacttgaccttgatttagctgtactgttagtctactagattagtgaataccagttgtcccatgtccagaaatcaagagtggctaatcacatctccctcaagttgttcaggttaacactatcattttgtgtataccgggacattacctttgatataattgaactggaatattatgtatttttagtgcgacaagtgcgtaactgttgaaacataagcaggcatttgtcagggttagcacgaactaaacaaaagcgctggcattctatttattgaccttctagctgatacaaataaagtgctatggcatccttttttattttatggattccagatacaaattaaaattagtcattcatgtttttcgaccttctagttatttatcaactggaagaaatgttggtcttgtgagcagtgaatttgtgaaccgtaggtgcattcagtgagttcaatattggcatgtgttgttttgttaccagctcaagtgagtttgtaattgtaccttagaaacctcgttttggcttgataatagtaggctaatagcaatagatctccttttttagctgggcttggccaaatgttttgataagccttcaactaaagtggattggaatgtcaatgcttgttttacttttttaagtcctgttattttaatgtataaccctgtggattctaagttattgatacgagagactgattatctcggccagggaaggacctgttctggtatacaaaagataagaaatctgactcagaagatgctctcaaggaagaaatcaggagagtgaaggaagaggaggagcagtccatgcgggaggcacttggcttagttcctaagcgtagtagtcgacctaagggcaaccgattagataagcatgagtacgcagagcttattaagcgaggatcaactgcagaagacttgggtgctggacatgctgaagcagcacaagtgcagggtctaggtttatacaagtaagttcatgctgcaatagtttcaaacccactttaaatcatccttattatatagtggtcatataatcgaacttatctgaaaagttttttctagtgatatttgatgaattactaataatataatcataatgcacattatctcaggggtcctcgcagagaggaagaatcgagctcctttaaccttgatcctccagaaatggtgcccgctgagcaggctgacaaccctccaccggaaaccaaaccggaacgtgaagattccgatgatgatcgtaggagcaaaagggggcgtgaggagaggggaggggagaaagagcggaagcgagaaaggcactcggaaggaaaggagaggaggcgtgacaagcaagagaagaggagtcggcatgagtcggacgacaggtcgaagcgccaccgcaaagacaagcacaagaggaggcatgactctgattccgactagttactgcggctctttcaacctgtctcactgtatcctgccatcatatttcatgccttgctacgtttgcttgatgatgatgtagttgtaaaaacagcttgtatactcttcttgaatacattgtctgtttttaacttgcacatgagaaatatgttgaacctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0558700, RefSeq:Os08g0558700