Os08g0560000

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0560000| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001069041.1 GI:115477820 GeneID:4346321| Length = 2368 ...")
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Gene Name

Os08g0560000

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001069041.1 GI:115477820 GeneID:4346321

Length

2368 bp

Definition

Oryza sativa Japonica Group Os08g0560000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28131218..28133585

Sequence Coding Region

28131372..28132277,28132658..28132903

Expression

GEO Profiles:Os08g0560000

Genome Context

<gbrowseImage1> name=NC_008401:28131218..28133585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28131218..28133585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcgttgacttggtcaatgccggagagcagcagcagatgggcagcaagagagcggcggcggaggatggcgacggcggcgtggacgacagccgcgagtactactgccggcgaggcgtccggcacctgtgcgacagcggcattaccaggcttcccggcaactacgtcctcccggcctccgaccgccctggccaagccgccggcgccgccgccgccgccggggggtcagtgaagctccccgtggtggacctgtcgcgcctccgcgtcccttcggagcgcggcgcggtgctccggacgctggacgcggcgtgccgggagtacgggttcttccaggtggtgaaccacggcgtgggcggcgaggtggtgggcggcatgctcgacgtggcgcgccgcttcttcgagctgccgcagccggagcgggagcggtacatgtccgccgacgtgcgggcgccggtgaggtacggcaccagcttcaaccaggtgagggacgccgtgctgtgctggcgcgacttcctcaagctcgcctgcatgccgctcgccgccgtcgtcgagtcatggcccacctcgccggccgacctgcgggaggtggcgtcgaggtacgcggaggcgaaccagcgcgtgttcatggaggtgatggaggcggcgctggaggcgctgggcgtgggcggcggcggcgtgatggaggacctggcggcggggacacagatgatgacggtgaactgctacccggagtgcccgcagccggagctgacgttggggatgccgccgcactcggactacggcttcctcacgctggtgctccaggacgaggtggccggactccaggtgatgcacgccggcgagtggctcaccgtcgacccgctcccgggctccttcgtcgtcaacgtcggcgaccacttggagatattgagcaatggacggtacaggagcgtgctgcacagggtgaaggtgaactcgaggaggcttcgggtgtcggtggcgtcgttccacagcgtggcgccggagagggtggtgtcgccggcgccggagctcatcgacgaccgccacccgcgccgctacatggacaccgacctcgccaccttcctcgcctacctcgcctccgccgccggcaaccacaagtccttcctccactccaggaggctctactga</cdnaseq>

Protein Sequence

<aaseq>MAIVDLVNAGEQQQMGSKRAAAEDGDGGVDDSREYYCRRGVRHL CDSGITRLPGNYVLPASDRPGQAAGAAAAAGGSVKLPVVDLSRLRVPSERGAVLRTLD AACREYGFFQVVNHGVGGEVVGGMLDVARRFFELPQPERERYMSADVRAPVRYGTSFN QVRDAVLCWRDFLKLACMPLAAVVESWPTSPADLREVASRYAEANQRVFMEVMEAALE ALGVGGGGVMEDLAAGTQMMTVNCYPECPQPELTLGMPPHSDYGFLTLVLQDEVAGLQ VMHAGEWLTVDPLPGSFVVNVGDHLEILSNGRYRSVLHRVKVNSRRLRVSVASFHSVA PERVVSPAPELIDDRHPRRYMDTDLATFLAYLASAAGNHKSFLHSRRLY</aaseq>

Gene Sequence

<dnaseqindica>155..1060#1441..1686#aaagcaaacagctaatttgtgtagcgatccagctacagacagacgacaccacaaacatagctaagtagcttaggcttaggcttagctaagtacaagtgcacttgcgcttcaaattttgccggaaaagcgaccactaattaagctactggctagaatggcgatcgttgacttggtcaatgccggagagcagcagcagatgggcagcaagagagcggcggcggaggatggcgacggcggcgtggacgacagccgcgagtactactgccggcgaggcgtccggcacctgtgcgacagcggcattaccaggcttcccggcaactacgtcctcccggcctccgaccgccctggccaagccgccggcgccgccgccgccgccggggggtcagtgaagctccccgtggtggacctgtcgcgcctccgcgtcccttcggagcgcggcgcggtgctccggacgctggacgcggcgtgccgggagtacgggttcttccaggtggtgaaccacggcgtgggcggcgaggtggtgggcggcatgctcgacgtggcgcgccgcttcttcgagctgccgcagccggagcgggagcggtacatgtccgccgacgtgcgggcgccggtgaggtacggcaccagcttcaaccaggtgagggacgccgtgctgtgctggcgcgacttcctcaagctcgcctgcatgccgctcgccgccgtcgtcgagtcatggcccacctcgccggccgacctgcgggaggtggcgtcgaggtacgcggaggcgaaccagcgcgtgttcatggaggtgatggaggcggcgctggaggcgctgggcgtgggcggcggcggcgtgatggaggacctggcggcggggacacagatgatgacggtgaactgctacccggagtgcccgcagccggagctgacgttggggatgccgccgcactcggactacggcttcctcacgctggtgctccaggacgaggtggccggactccaggtgatgcacgccggcgagtggctcaccgtcgacccgctcccgggctccttcgtcgtcaacgtcggcgaccacttggaggtacgtacgtacttacttacttttcagctaactaggtagctagctactgtacgcagtagactagtactagtcgtcgctgtccaagtacgtggcaaaacctaagcatccaaattagtaatttgtactgataataattcgtcttttcagtatcgtgggacgacctctagttttgctgcatgtgtcacacatgacaaataaactcgatcgatcgatcttgtcactgcaaaatatccttccttaaattaaagtattttaagacgacttgcatatatatgcaactcagatcagcagccaaagctacagtttatagttgcaataacattattttactagtagtggctaaatgaaatgaaattgaaatgatggggatatggatgcagatattgagcaatggacggtacaggagcgtgctgcacagggtgaaggtgaactcgaggaggcttcgggtgtcggtggcgtcgttccacagcgtggcgccggagagggtggtgtcgccggcgccggagctcatcgacgaccgccacccgcgccgctacatggacaccgacctcgccaccttcctcgcctacctcgcctccgccgccggcaaccacaagtccttcctccactccaggaggctctactgatcgatccattcttaattggatcatctctacactataattaactggatcggagtactcctgtaattataattataattatattagctactactactcatgatccacccccggtaattataattgcggaattgccttggctaagttagctccaaacacagcccacagatcatcgatatgattgatcaaactcgatctcacttaattaattatataactactatattcacctatatagctagcttgctgttagcagcttaattgccggagtaaaattaaatcaaatcaatcgatcgattgatcgacaagagaacaagtcaacagcagggcccaactccctgaacgaggcagaggcaggatttgaccggtcaaacctagcttttcagcttaattgccttcccaacaattcgattggcgcgcattgactagctaataatatccatacatatgagagtatactataattaagttgtcttgttctcatcgatcgattggtcgtctgaaaaagccaaagccagctgtgggtttgcgtatgtatgcatgtagtatattttttttctagttattaaaatagtaagttgttgttttgacttttcaaagtcaacgtgattgtaccttgacgtacatagtactgaatcatgtacgtcatcacatatatatatatattccgaaagagtgttcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0560000, RefSeq:Os08g0560000