Os08g0561500

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0561500| Description = Similar to Nodulin-like protein 5NG4| Version = NM_001069047.1 GI:115477832 GeneID:4346327| Length = 2837 bp| Defin...")
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Gene Name

Os08g0561500

Description

Similar to Nodulin-like protein 5NG4

Version

NM_001069047.1 GI:115477832 GeneID:4346327

Length

2837 bp

Definition

Oryza sativa Japonica Group Os08g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28206737..28209573

Sequence Coding Region

28206862..28207080,28207226..28207814,28208907..28209364

Expression

GEO Profiles:Os08g0561500

Genome Context

<gbrowseImage1> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttga</cdnaseq>

Protein Sequence

<aaseq>NQNGGGGGCTEGVRVAGAGAAPWGDAGAAVRLRGVPCGVSVCPQ HGHQQARLPRLPQHHRPHPPRPLRLFPREEGSAAADAELRGAVLPAGAVRHHRQPGLL PPRTRQHLPDLRLRHPELRPGHHLRHGRRAPHRARPPRPPRRRRQGARHAGLRRRRLR HHALQGPYHLRSQAAAAGGGGGAVEGGDRRRGEELDAGLRVLDRALPVVVGMAGAAGA GAEEVPGEAVGDVIHLLLRRHPVPHHRRLHGEGRRRLGLPLRLRALHHPLRRIHRVGG GVRGADMVHRQGGPGVRGGVSARPDPGGGHHGLPHPRRELLPRRHHRRRLHHRRPLPR PLGQEPRACSPRQGRRRHCHRPRRRPLPDHRRRQAVLLRHPAPPAAYLLLLRQRRLTD RSVSLLITCVHASSHLIDRLAASTTDLAC</aaseq>

Gene Sequence

<dnaseqindica>126..344#490..1078#2171..2628#caagctgcatgctagctagctaattaagctccccagctcgattcctagctatctaattagctagcgagggatcgatcgagagcttctccttccgggcttccggccagccggcggggaatagctagaatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagtatatactgtctgctgtttaatttctgaattgaacctccgtcctcctagagtttcagtcagttgtaatctcgatcgatcgatcgatctgtagtgtaggtagctaacaattaattaatgtagacgaacgtggatgatggatgcaggaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccgtacgtatctatctccattctccctacgtatacgatctccatctattcacctacgtatacgatccatatgcatgcattactgctggtctttcgattattcctacctccaaatatcaacatgcaaattaattaattaattatttactgatcagctcatcttatgccaacctaattaagctagctagtagtggacaggactatacatacgtgcaacgattaatttattaagctaatctacagcctactttgtgttaattatatctgcaccagctcatggtcactttaatttattgacaatcattctgtatactgtactggattgaaaaagggccggaaatccatatgtacacttttcaatagtagtaactattttgtgacattaggaatataaatacatgcttgcaaatgtccatattgtatttaatttgtcctgctttagttaattagcacttagtactggtatatatctgtcagtaaagtaatgcaagttgatcgatttctgcggcagcagcagagtattatagcaagcatggtgcaacacagaagctagctgtacaaatgatcactttttttccgtaggataacatgctgggttgtactatatagttatcaatcatgcccttaaagttacctttggacgtttgtttgtcgacacacatcgccggcccataatgcatccgaccatgtactcctagcatgcatatatacagtacacttggctggaatatatacagtacttacttttccaatgaggacatgtttagtagggcttaatataaaatcataaatttaactcaaaagttaagcttggagtaaagttttagagcagcctaaacattactttaccactctagttaattttgtggtagtattttagtcaactccgctttcttttttaacggagctgaatctatttggtcgagcttcagcttcaaaagaggagttggagttgaagctagccaatgcatgaatcttcttaagccaaactaaattgttaactgcttaattaatcaatgaagtgcatggtttgcataatgaaactgaagatgagatgtgagagctgatgggggtaggtggtgatgatggatgcagggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttgagaaccaaatgatgttgatgatttgcctttgcctatgatatcgatcgacattaaactagctagtagcttgcttgttttgctaggatttgttttgtttggatcatgcttgtgctttcttaatttgtaacgtcgcgagagattaattgctcaatgatgcttgtgctacattttgtataattaatgtacctacatgtgtgcttcattgtacct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0561500, RefSeq:Os08g0561500