Os08g0561700

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0561700| Description = Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1)| Version = NM_001069049.1 GI:115477836 GeneID:43463...")
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Gene Name

Os08g0561700

Description

Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1)

Version

NM_001069049.1 GI:115477836 GeneID:4346329

Length

3037 bp

Definition

Oryza sativa Japonica Group Os08g0561700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28220474..28223510

Sequence Coding Region

28220554..28220803,28221233..28221294,28221407..28221446,28222181..28222276,28222385..28222416
,28222521..28222596,28222677..28222730,28223163..28223188

Expression

GEO Profiles:Os08g0561700

Genome Context

<gbrowseImage1> name=NC_008401:28220474..28223510 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28220474..28223510 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaagccatcctcgccgctgccatggccgcccagaccctcttgttctccgccaccgcccctcccgcctcccttttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcgggcgccgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgccgtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttcacggcttccacctccacgagtttggcgatactacgaatgggtgcatatcaacaggaccacattttaacccaaacaatttgacgcacggtgcaccagaagatgaagtccgtcatgcgggtgacctgggaaacattgttgccaatgctgaaggtgtagctgaggcaaccattgttgataagcagattcctctgagtggcccaaattctgttgttgggagagcattcgttgttcatgagcttgaagatgatttggggaagggtggccatgagcttagtctcagtactggaaatgctggtgggcgacttgcatgcggtgttgttgggctgaccccgttgtag</cdnaseq>

Protein Sequence

<aaseq>MQAILAAAMAAQTLLFSATAPPASLFQSPSSARPFHSLRLAAGP AGAAAARALVVADATKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGF HLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQ IPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPL</aaseq>

Gene Sequence

<dnaseqindica>81..330#760..821#934..973#1708..1803#1912..1943#2048..2123#2204..2257#2690..2715#aagctaagctaaaccttatcatcgtcaggtcaggcacttcaccaaccctctgcctcccttccgccgccctccgccgccgcatgcaagccatcctcgccgctgccatggccgcccagaccctcttgttctccgccaccgcccctcccgcctcccttttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcgggcgccgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgccgtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggtcactacccacctgctctccttctttctcttgtaattttactgccctcctctacgactaccaactagactagaagcttcatcgcctaatttaattggccatccacccaaggagttcccctctttcctcaggctattcgcaaaattttgtctttttttttagtgcataactcgagttttgctctgtacaaacaactgaattctgtttcagttatcaatttgcaatgcatctagctataatttattaactgttaccacctcaattacatacatacgcaagaatttattcacttcaaaattcacacactagaaactactaatatctgacttccggctaaaatgtcaagatatcagcatcagtgtacataactacattcacatccatcaaaaggatcccgattttgtctctctaattgcttttttatatcaggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttcacggcttccacctcgtaagtattgtgctttaaattggcatttacgcttactgcttacattccttcattttcatttatgaacattactctaattactttttgcaatatattcatgtctgttttgcagcacgagtttggcgatactacgaatgggtgcatatcaacaggttgattgttcatggactcgattatgcctgcatatgccaacgttccataatccacctgataaatcaacatttgcccttcacccttataagcaccaccaaattcctatttagattttctttgagattgtgcctatttttcagcttgcaagtgtcacctttcctctgcaatgctattagggcacatgctatcctcgcaaattttgtttttggcttttttgaaaaaactcaatactgtgaaaaaaaaattgccgtccaattcactaagagcacccacaatggtaaagtaaggtgctctctataaaacatgtacatctcagcaatagactagattaatagtaaaccacctcaatagtatgtctacatgggtatatatagctctctaatccattgcctcatttttctctatagactatctccaggatagtagatagctttgctctctctcttcatttaatctcttccaagtaggacaatatgctgacatggatctattgtagagagcctatagataaccattgcgggtgccctaaggcctgtctactcaggccctgtttggctaatgggacagggaaatcatttcgcaactactaaaagacatcttaaaatcctaaccattcattctcactctttcatttaatcctaacccttcattcatttccaaatctcaatcccacctcacatttcccattatccaaacacaccctcacattacatggcaaaactttgtcctgcaggaccacattttaacccaaacaatttgacgcacggtgcaccagaagatgaagtccgtcatgcgggtgacctgggaaacattgttgccaatgctgaaggtatagccttcatgtaatcactacgaatgcatttttgatgtttctctctaaaacaatcttcttggcatacttattttatggtgtgtctgtttaattgttgtcatacaggtgtagctgaggcaaccattgttgataagcaggtagagtaaaaaagatcatacttttaccactaggagagttgctgcattgctgttttaagttacgaaactcagcttacctacttttgatggtttcttctaaatagattcctctgagtggcccaaattctgttgttgggagagcattcgttgttcatgagcttgaagatgatttggggaagggtatgcctaattatattgatgctcagcatttttttttctacgagtttacacacacctcattttttatccatcacttttaggtggccatgagcttagtctcagtactggaaatgctggtgggcgacttgcatgcggtatgttctctgaatcatatttctgttccataaatgttcttgtaacgttaatgtggtacataggtgcacgcatgaataaaatattggaacaaacatatcgtagtaacgaacaatattataaaccttgtatttcaaaaaaataaaaacgtcaaaacatgttttctggggtacattccacttgctggtgatcagacattggattagtagcgaattcctcacatggttatccaaataataagttactacaactgttattcatgaaatgttcatttcgactgtgaagcgtttgtaactcttcggtcttcacctataatgtaaccattggctggtgtttgctctgtgaaatgtatgaaatgcaaacgcatctgttctcttttattcttttaaggaagaagtgtaactgtttccaacactaatatgtttgttgtgcaggtgttgttgggctgaccccgttgtaggtcgctgcaagttgcagctgaagtgtcagtatcgcatccatgtcaccctttttgtcatcttcgagcctgaggcagtcgttcttgtatcacatggatttcgcaacatggatgcttaatagtatctgttgatcgttcgtctcacagtaataaaatttagttgagcaaataagtgtcgtcacatcccctgttctccaccctgtcaaactataaattgtgaaacatgagctgttctgggtatacaacgcataaaaaaaaccatgtgttatacataacagccttgttgctggctgtactttcgtgcttctgatctaatctttgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0561700, RefSeq:Os08g0561700