Os08g0561900

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0561900| Description = Similar to Alpha expansin 26| Version = NM_001069051.1 GI:115477840 GeneID:4346331| Length = 1162 bp| Definition = ...")
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Gene Name

Os08g0561900

Description

Similar to Alpha expansin 26

Version

NM_001069051.1 GI:115477840 GeneID:4346331

Length

1162 bp

Definition

Oryza sativa Japonica Group Os08g0561900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28225554..28226715

Sequence Coding Region

28225632..28226128,28226204..28226516

Expression

GEO Profiles:Os08g0561900

Genome Context

<gbrowseImage1> name=NC_008401:28225554..28226715 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28225554..28226715 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggtgtacgtgggcgttggggcgggtggtgttggcggtggtgttcctggttgcgttggctgccggcgatgcagcgccgcccaaggttcaccggaaccacggcaagttcacggcggggccatggaagcaggcgcacgcgacgttctacggcgggcgcgacgggtccggcacgctggacggcgcgtgcgggtacaaggacacgtccaaggaaggctacggcgtgcagacggtggcggtgagcacgccgctgttcggcgccggcgccggctgcggcgcctgctacgaggtcaagtgcgtggacagccccgacggttgcaaggtcggcgccgcccccttggtcgtcaccgccaccaacctctgcccccccaaccccggccagtccaacgacaacggcggctggtgcaacccgccgcgcgagcactttgacctctccatgccggcctttctgcagatcgcgcaggagaaggccggcatcgtgcccatatcgtacagacgggtgccgtgtgtgaaggtgggtgggatcaggtacacgataaccgggaacccgtacttcaacctggtgatggtgtcgaacgtgggcggggcgggtgacgtggcagggctatcggtgaaggggaacaagagggtgaagtggactccgctgaagcgcaactgggggcaggagtggcagacgtcggaggtcctcaccggagagtcgctgacgttcagggtgatgaccggcgaccaccgcaaggccacctcctggcacgtcctcccccccgactggcagttcggcgtcacctaccaggctaccaagaacttcaactaa</cdnaseq>

Protein Sequence

<aaseq>MWCTWALGRVVLAVVFLVALAAGDAAPPKVHRNHGKFTAGPWKQ AHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDS PDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIV PISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRN WGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATKNFN</aaseq>

Gene Sequence

<dnaseqindica>79..575#651..963#ggaaatctaatcccccgcagctactaattactactaaccgttaaaagtagccgccggttaatattcgatcgatcgatcatgtggtgtacgtgggcgttggggcgggtggtgttggcggtggtgttcctggttgcgttggctgccggcgatgcagcgccgcccaaggttcaccggaaccacggcaagttcacggcggggccatggaagcaggcgcacgcgacgttctacggcgggcgcgacgggtccggcacgctggacggcgcgtgcgggtacaaggacacgtccaaggaaggctacggcgtgcagacggtggcggtgagcacgccgctgttcggcgccggcgccggctgcggcgcctgctacgaggtcaagtgcgtggacagccccgacggttgcaaggtcggcgccgcccccttggtcgtcaccgccaccaacctctgcccccccaaccccggccagtccaacgacaacggcggctggtgcaacccgccgcgcgagcactttgacctctccatgccggcctttctgcagatcgcgcaggagaaggccggcatcgtgcccatatcgtacagacggtacggtcaattagtgatatatatattgttcgtcttttctcatcagcttaagctaatatattatatggaatgtagggtgccgtgtgtgaaggtgggtgggatcaggtacacgataaccgggaacccgtacttcaacctggtgatggtgtcgaacgtgggcggggcgggtgacgtggcagggctatcggtgaaggggaacaagagggtgaagtggactccgctgaagcgcaactgggggcaggagtggcagacgtcggaggtcctcaccggagagtcgctgacgttcagggtgatgaccggcgaccaccgcaaggccacctcctggcacgtcctcccccccgactggcagttcggcgtcacctaccaggctaccaagaacttcaactaattcttatcaatcatgccaacccaacccaacccaacagcaaaatatgaaggctctcttacatgcatgaatgctgactactgcaaatctggatcgaaccgatgatgatcatactagctacaaatgtatatatgtgttaacgaggtgaaaggaaagcgaagaaatttaatttgtgcatgaaaataaaaaggatctgtttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0561900, RefSeq:Os08g0561900