Os08g0562300

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Revision as of 13:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0562300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001069054.1 GI:115477846 GeneID:4346334| Length = 144...")
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Gene Name

Os08g0562300

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001069054.1 GI:115477846 GeneID:4346334

Length

1444 bp

Definition

Oryza sativa Japonica Group Os08g0562300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28243226..28244669

Sequence Coding Region

28243502..28244659

Expression

GEO Profiles:Os08g0562300

Genome Context

<gbrowseImage1> name=NC_008401:28243226..28244669 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28243226..28244669 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattccaggcggtggcggcggcggcggcggcggcggaattagcccttacttggtgcagagccagcatgggcatggtggcggcgtcgacggcatggagatggaggagggcggcggcttcatgggcgagcagccacagtgccacccgctgctctacaacctgtccgtgctcaaggacagggtgcagcagctgcacccgctcgttggcctcgccgtcgcccacaacgcccacgcccacggccccctcgacgtctccgccgccgacgccatcatccaggaaatcgtcgccgccgcctcctccatgatgtacgccttccagctgctctgcgacctcggcacggcgccaaccaccgcgccatcacaggagaccgccgccgcctccgccgttgttgtcaagaacaacgaccatgccgccgatgccggtcagatggaggacgaccatctcatgcagcagcagtggcagcagaacggcagccgccagcacgattacagcagccatgcccatgcgccgccggtgttccacagcgaaacggcggcaccggcaggcgcgacgtcggcgacggacacgatcatcgagctggacgcggcggagctgcttgccaagtacacgcactactgccaggtgtgcggcaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagagcaaggcggcgctgtccaatccgaccaagctgctcgccaagggaggcgacgagacgatggcggcggcggcgaggaagtactcgtgcccgcaggagggttgccggtggaacaggaggcacgccaagttccagccgctcaagtcggtgatctgcgcaaagaaccactacaagcgcagccattgccccaagatgtacgtgtgcaaccgctgcggccgcaagcacttctccgtcctctccgacctccgcacccacgagaagcactgcggcgaccaccgctggctctgctcctgcggcacctccttctcccgcaaggacaagcttatcggccatgtctccctcttcgccggccaccagccggtcatgccgctcgacgccccccgcgccggcaagaggcagcgatcgtcctcggcgtccgtcgccgggaacattgacgacaccaccggcattggcatgggcgccgcctga</cdnaseq>

Protein Sequence

<aaseq>MIPGGGGGGGGGGISPYLVQSQHGHGGGVDGMEMEEGGGFMGEQ PQCHPLLYNLSVLKDRVQQLHPLVGLAVAHNAHAHGPLDVSAADAIIQEIVAAASSMM YAFQLLCDLGTAPTTAPSQETAAASAVVVKNNDHAADAGQMEDDHLMQQQWQQNGSRQ HDYSSHAHAPPVFHSETAAPAGATSATDTIIELDAAELLAKYTHYCQVCGKGFKRDAN LRMHMRAHGDEYKSKAALSNPTKLLAKGGDETMAAAARKYSCPQEGCRWNRRHAKFQP LKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHEKHCGDHRWLCSCGTSFSR KDKLIGHVSLFAGHQPVMPLDAPRAGKRQRSSSASVAGNIDDTTGIGMGAA</aaseq>

Gene Sequence

<dnaseqindica>11..1168#catacgtagcatgattccaggcggtggcggcggcggcggcggcggcggaattagcccttacttggtgcagagccagcatgggcatggtggcggcgtcgacggcatggagatggaggagggcggcggcttcatgggcgagcagccacagtgccacccgctgctctacaacctgtccgtgctcaaggacagggtgcagcagctgcacccgctcgttggcctcgccgtcgcccacaacgcccacgcccacggccccctcgacgtctccgccgccgacgccatcatccaggaaatcgtcgccgccgcctcctccatgatgtacgccttccagctgctctgcgacctcggcacggcgccaaccaccgcgccatcacaggagaccgccgccgcctccgccgttgttgtcaagaacaacgaccatgccgccgatgccggtcagatggaggacgaccatctcatgcagcagcagtggcagcagaacggcagccgccagcacgattacagcagccatgcccatgcgccgccggtgttccacagcgaaacggcggcaccggcaggcgcgacgtcggcgacggacacgatcatcgagctggacgcggcggagctgcttgccaagtacacgcactactgccaggtgtgcggcaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagagcaaggcggcgctgtccaatccgaccaagctgctcgccaagggaggcgacgagacgatggcggcggcggcgaggaagtactcgtgcccgcaggagggttgccggtggaacaggaggcacgccaagttccagccgctcaagtcggtgatctgcgcaaagaaccactacaagcgcagccattgccccaagatgtacgtgtgcaaccgctgcggccgcaagcacttctccgtcctctccgacctccgcacccacgagaagcactgcggcgaccaccgctggctctgctcctgcggcacctccttctcccgcaaggacaagcttatcggccatgtctccctcttcgccggccaccagccggtcatgccgctcgacgccccccgcgccggcaagaggcagcgatcgtcctcggcgtccgtcgccgggaacattgacgacaccaccggcattggcatgggcgccgcctgacgaccttactaactaactgtgattgtattgttgccatcacctgctgcatatatatgtccatgaaagattcaatccagtactgcatggctagttaaattagcatgacaatgctaattggaacacacatgttaatttggaaatcgatcagggcagcaatttcaggcagtttatcagttagttctatacattagcttatgagatgtgtgatgaatatatactgtattagctaactagctaggggctttagctttacaatataatactaaggtttattac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0562300, RefSeq:Os08g0562300