BGIOSGA004656

From RiceWiki
Revision as of 18:31, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA004656

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004656, complete gene.

LocusTag

OsI_04148

Ensembl Transcript ID

BGIOSGA004656-TA

Ensembl Protein ID

BGIOSGA004656-PA

Length

1200

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37802467..37803666

Sequence Coding Region

37802467..37802546,37802817..37803666

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37802467..37803666 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37802467..37803666 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGGGATTCCTACCAGCTCGGAGGTAGCCGACATCGACGCTCCCTCAACCATGCAAGGGATTCCTACCATAGAAAGGCCTGTTCCATGTAATTTGATTCTTGATGTTAGAGTAAGGTCGCATTTCAGTTTGCCAGATGGGGGGCTAAAGACCTATTTCACAAGTAGGCATTTTACAACAGATGTGGACATAGCTAACTTCAAATTGCTGCAGTTAGTTGATTTCATCGGCTCTAAAATTGTGTGGGGTTCTAAACAATACATTACTTTCTGGCGTGTTTGTGATGATGCATGGGTTGAGATTAGTAGTGATGAGCAATTGCATGAGTGGTTATCGCTGAACATAGCTCATGAAGTAGCCAATATTGAAGCCGATGTTGATGAATTTAAAGGCCCATTGCTATGCTCTCCCACAAAAAGAAGGGTCCATCCAAATTTCAGAAATAGTGTGCAGCTGCAAATTGAAAGTGCTCCACATATTTCTGAGTGTCCTCCTGCTGATCTAACCCCACCCACAGCTAAAGTGGTAGAGCCACCTATTTCAAAATCTAAGCATACCAAAAGAGCCACAAGGAAAAGGGTCAGTGATGAGACAGTCGGAGTTGATGAGGAGGGCTCTTATTCCGAAACTGAATCATTGGTGGCACTTAGTGATAGTAGCTATGACACTGACTTGGCCGCATCATCTGATTCTGATTGCTATGATTCTGAATGCTCTGACTCCGATAACAGCTATGAACCTGATGATGAAATTATTGATGATGATGATGATTGTGATGATATTCATGATTTTTCATATGATGTTGATGATCCATGCATTGATGTAGATGTGCTGTTTCACAATGTTGATGAGTGCAAATCAGCAGTAACCCACTATGCAATCTTGAATGATTATGCTTTCCAAACTGTTAAAAAAAAGCAAGGATAG</cdnaseq>

Protein Sequence

<aaseq>MEGIPTSSEVADIDAPSTMQGIPTIERPVPCNLILDVRVRSHFSLPDGGLKTYFTSRHFTTDVDIANFKLLQLVDFIGSKIVWGSKQYITFWRVCDDAWVEISSDEQLHEWLSLNIAHEVANIEADVDEFKGPLLCSPTKRRVHPNFRNSVQLQIESAPHISECPPADLTPPTAKVVEPPISKSKHTKRATRKRVSDETVGVDEEGSYSETESLVALSDSSYDTDLAASSDSDCYDSECSDSDNSYEPDDEIIDDDDDCDDIHDFSYDVDDPCIDVDVLFHNVDECKSAVTHYAILNDYAFQTVKKKQG</aaseq>

Gene Sequence

<dnaseqindica>1..80#351..1200#ATGGAAGGGATTCCTACCAGCTCGGAGGTAGCCGACATCGACGCTCCCTCAACCATGCAAGGGATTCCTACCATAGAAAGGTATTTTCCCTCTATTCTCTTCAAGTGACCCTGTGGTTGTGATCCTGTGACCCTGTGCATGCTTGTGGTTGTGACCCTGCTAGGTTATAGGAACAGATGCAATACCATGCAAATTTAGGGTATAGATGTTGTGTCCAGTGCTAATTGAACTTGGTGTCTCTATTGCTAATCTAATCTAGGGTTTATATGTTGTATGCTGTCTCCATTCCTACAAGCACCTAAAAATTTTACTGAAAGTTGTTCTTTATCTTGTGTTGCTCCTATTTATAGGCCTGTTCCATGTAATTTGATTCTTGATGTTAGAGTAAGGTCGCATTTCAGTTTGCCAGATGGGGGGCTAAAGACCTATTTCACAAGTAGGCATTTTACAACAGATGTGGACATAGCTAACTTCAAATTGCTGCAGTTAGTTGATTTCATCGGCTCTAAAATTGTGTGGGGTTCTAAACAATACATTACTTTCTGGCGTGTTTGTGATGATGCATGGGTTGAGATTAGTAGTGATGAGCAATTGCATGAGTGGTTATCGCTGAACATAGCTCATGAAGTAGCCAATATTGAAGCCGATGTTGATGAATTTAAAGGCCCATTGCTATGCTCTCCCACAAAAAGAAGGGTCCATCCAAATTTCAGAAATAGTGTGCAGCTGCAAATTGAAAGTGCTCCACATATTTCTGAGTGTCCTCCTGCTGATCTAACCCCACCCACAGCTAAAGTGGTAGAGCCACCTATTTCAAAATCTAAGCATACCAAAAGAGCCACAAGGAAAAGGGTCAGTGATGAGACAGTCGGAGTTGATGAGGAGGGCTCTTATTCCGAAACTGAATCATTGGTGGCACTTAGTGATAGTAGCTATGACACTGACTTGGCCGCATCATCTGATTCTGATTGCTATGATTCTGAATGCTCTGACTCCGATAACAGCTATGAACCTGATGATGAAATTATTGATGATGATGATGATTGTGATGATATTCATGATTTTTCATATGATGTTGATGATCCATGCATTGATGTAGATGTGCTGTTTCACAATGTTGATGAGTGCAAATCAGCAGTAACCCACTATGCAATCTTGAATGATTATGCTTTCCAAACTGTTAAAAAAAAGCAAGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004656