BGIOSGA004695

From RiceWiki
Revision as of 18:31, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA004695

Description

cDNA clone:J013151P17, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA004695, complete gene.

LocusTag

OsJ_03880

Ensembl Transcript ID

BGIOSGA004695-TA

Ensembl Protein ID

BGIOSGA004695-PA

Length

2036

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38319951..38321986

Sequence Coding Region

38319951..38320152,38321302..38321820,38321904..38321986

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38319951..38321986 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38319951..38321986 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTGGGACAAGGCCAAGGCGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCAGATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATTGA</cdnaseq>

Protein Sequence

<aaseq>MEWDKAKASSGEAVDDRGGGEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAALPNNNAESEAEADEESPTDKKPKSDRPLHQNIAMRDHNSERISEMHHFDTEHEQIRRMMYASNDSSSRSSGSLGQMSFYDNVMSNPRIDHFLGKVESPGSFPHMRSGESFDMY</aaseq>

Gene Sequence

<dnaseqindica>1..202#1352..1870#1954..2036#ATGGAGTGGGACAAGGCCAAGGCGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGTCAGTACAGTTCACCGAGTAGCTTGGTGTAAGGGTTGCATTTACTCTTTCTGCAGAAAGGGGGGGAAAGGTACTCTGTTTATGTCGTGTACTAGTACTAAGTTTGTTTAGGGATGCATCATTGAGTCGAGTTTCAGATGGTCCCTCAGAAAAAGAAATTGTCAGATCTGTAGTAGTAGTTAGTTTGCTTTTAAAGTTGGAGGCAATTTGGCTGGGACCTGTTTAACTATTTTGCAAAAATAACAGGGATCAAGTTTTTGTTTCAGGTGTTTTTAGCAGTTTGCTACTTCATGAACTGATCCCTATACATTGCAATTGCTCTTCCGATTATTATGTTACATTGCTTGGTAATTAAACTGAAAACCATAGAAAGTGCCAGAACATCAATTTGATGCATTGATAGGAAGTTGACAATAGGTTGGGTCCACATTGAATATTGAAATCCTAAATGCATCGTTTTTTTATCCATTGTGCTTATTATGTTTGATTTATTTGCTGTAGGTCATATTTCATTGCTACTCTATTACATTTATTTATGTTAGCTGTAAAATTTATCTGGTATACTGTATTAGACACGACTCAGCATAGGCACGGTTATGCTTTTTTAAAATTTTATCCCATTTAGATTTATACTAGTATTTGTGTCCAAAGAGCAGTTCGAATGCAACAAAAGAAATTTAGTATAGTATCACTAGCTAGTGACTCAGAATTGTCATGTGGGACCATTTACCATTTTGTGACATGTGCACCTCCGCAATCTTCTGCTATCTGCAGAATTTGAGCTTGACATGCAGGAATCTCATAACATGTTACTTGTCTTTCACTTGGTCAAACACTAATGCTTCTGATGCAATTTTAATCATTTCATCATAGTTGTACGTTTTTTCATACTTATCAATTTATATCAAGTACTTAGCTAGTTTTCTTTGAAGCTTATTAATATTTTTGTCCTCGAAAATTATGTGGAGTCATTGTGCATTACCCTTCTTTCAGAAAAGACTCCAAAACATAGTTTGTTTATCTAGGGCTCTAGGCATTTGCCCATTCTCTCTTTCTTTTTTTTTTAAAACTTTTCTTCGATCAATCTGCTGTATACGTTTTAATAGGACAGTTTCTTTGCTGTCAACTGAGAGTTGGTTTCTTCTTCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCAGATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGTACCTCCTACAAACACCCTTGCTTCATTTGACACTGTAAAACCGCAAAGAAGTTACTGAAAAAGTTTGGTTTAATTTTGCAGGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004695