Os08g0566700

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Revision as of 13:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0566700| Description = Conserved hypothetical protein| Version = NM_001069078.1 GI:115477894 GeneID:4346359| Length = 3074 bp| Definition ...")
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Gene Name

Os08g0566700

Description

Conserved hypothetical protein

Version

NM_001069078.1 GI:115477894 GeneID:4346359

Length

3074 bp

Definition

Oryza sativa Japonica Group Os08g0566700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28466953..28470026

Sequence Coding Region

28467172..28467654,28467761..28467961,28468044..28469489

Expression

GEO Profiles:Os08g0566700

Genome Context

<gbrowseImage1> name=NC_008401:28466953..28470026 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28466953..28470026 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggaagaaggtggcggtgatttggatgtgatgagtgatctgaagcagcaaggcatggtgcagaggagggtcatccaagatgtgaggaacagcctgtactactcgtccgcaatgtcaatggtgctagagactaatggcggaggagacatggtggcggaggcggagatgaataatggtggaggtggcgcaccatcgtcagtgctggatgagctcctgtgggagaatcggatggagcaggccgtggagcagttgatgcaggaacaggagagtggcgttctggccctgtcgctgtcggcgaggaaggcgatggtcgccgaccgcctcgcgtccgtggcggagcacccgcggacaccgcggccggagctcctccgggcggtggcggggctctgcaggctcggcgaggcgcggcgagcgaaccacctgctcttggggtactaccggcgaagcgtcctccgcggcgtggacgagctgaggcagaagcagaagcagcggaacaacaacatcatcatcatcaaggagctggtgcgcacggtgctgtccaccatcgttgaagcgtcgagaagcgtggtgtcgtcggaggcggcggaggcgaggcggtgggcgagggaggagatggacggtctgggcgtggcgttccgagagttggtgcacatggcagcagctgatggcaagctgtctctgctactggaagctgcaagatgcgccctctcctacggccctctgctgctcctgcttgatgaggagttggccgaatatctgagggagctgctcgcccggtgcatggaggaggcgctggccatgtacgccgcccatctcaggcaggtcctccgcctgctagtgctgcccgttcccgacaacgacgacgacgacgacgacgagggcgcctcctcctccatgttgctggggcgcttcctcctctcgggggtgctgagaacgtcgacgacaaaacacaactgctggtgcctgctcaccacgagcgggaggaagctggttaccctcatgcaggaagtggcggatgacgtctcgccgctgctggagctggatctcgctctcggatccacgctgctccaccttctcgcggatctcttacgagactacatgctcatgcaacttggagcaaccgccgctgccgatgacatgatgatggtctccctcctaatcaactgcaccacgctgctgtccctcttcccgctcatcgcgcgccgtatcttcacaactacatcatctcaacaaccagctgattttcatcatgccactaataataagggggagctccacctccacggcctcatcgtgtccatcaaagaagccgccgcccaagtatggacatgcttctgccaccacttcatacgccacaccatcatgtcaaccaccctacaccacaaaacacacagcagcagcagcatcaggcacggcgccaatatgccttcctctgcttttcaggtgttgttcctacgggtgaggcagctgaatagtctatacggtgccatcttaaccggtgaggatggcaccatgaagaagctgttgcaagagttgatggaggctatcatactcttctacctctctgatgaggacctacatgactcttggatcatccgtcaagcatcccatgctgtcccaatacaggacacgctccttctccagatccagctagacgttcattttctactacaagttgcacagtttggtggcttctcctccgacgatttcagggacaatgcactggattcgctcaggaaagcacaagcgaaggtcgtgccattatcatcatttttggagcagcagcagcacgaggagtgggctgccgatgctgcaaggcacgcaatgcaagtgctgatgatggggtctcaggctgatgaggagaacagcaccgactcagtgcagaaagacgaattagcagctgatgatggtgatgagatgcagccggatgcttgggtcggagcttgcacttgtagcgatggcaagtccagcgatgagttcgtcagcattgaggatgatcaactagccattcactcggagaatgaggccggagctgctgctgctgcacaacaagtcaccatcgaagaagcaacaagtgcacaggccaaggaagagaaaaacagcagttgctcgttgcaggatcgatga</cdnaseq>

Protein Sequence

<aaseq>MSEEGGGDLDVMSDLKQQGMVQRRVIQDVRNSLYYSSAMSMVLE TNGGGDMVAEAEMNNGGGGAPSSVLDELLWENRMEQAVEQLMQEQESGVLALSLSARK AMVADRLASVAEHPRTPRPELLRAVAGLCRLGEARRANHLLLGYYRRSVLRGVDELRQ KQKQRNNNIIIIKELVRTVLSTIVEASRSVVSSEAAEARRWAREEMDGLGVAFRELVH MAAADGKLSLLLEAARCALSYGPLLLLLDEELAEYLRELLARCMEEALAMYAAHLRQV LRLLVLPVPDNDDDDDDEGASSSMLLGRFLLSGVLRTSTTKHNCWCLLTTSGRKLVTL MQEVADDVSPLLELDLALGSTLLHLLADLLRDYMLMQLGATAAADDMMMVSLLINCTT LLSLFPLIARRIFTTTSSQQPADFHHATNNKGELHLHGLIVSIKEAAAQVWTCFCHHF IRHTIMSTTLHHKTHSSSSIRHGANMPSSAFQVLFLRVRQLNSLYGAILTGEDGTMKK LLQELMEAIILFYLSDEDLHDSWIIRQASHAVPIQDTLLLQIQLDVHFLLQVAQFGGF SSDDFRDNALDSLRKAQAKVVPLSSFLEQQQHEEWAADAARHAMQVLMMGSQADEENS TDSVQKDELAADDGDEMQPDAWVGACTCSDGKSSDEFVSIEDDQLAIHSENEAGAAAA AQQVTIEEATSAQAKEEKNSSCSLQDR</aaseq>

Gene Sequence

<dnaseqindica>2373..2855#2066..2266#538..1983#tgttgagtaggttcgtttgatgtgtggatttaggcaatatgcaaacagcaaaaaaacaacgaaaaaaatttaatcctggttggtaacaccaaccggccaccatctttagtcccgtactaaagatttttaaggtcctggtttgcaaccgaaactaaagcggttgaaaacagggattaaagatggattccctaatagtgagtatttaatatatttttgatagtgcgtttattttgtgtttaaagtatttctatactttttataagtttgatcaaaattaattagaaaaaaaatcaaaacaacttataatacgaaacggccgcagtaatcaatgtttacagggtatacagcacttgtgctccgatctcctggaaataaacaaggcctcagagcaagacttccgaaggaatttgtatctaagctacctgtcgtttgttaggtacgtatgatacgaagggtttattcgtcatctatatatctatatatacgtacgaatgaatgtgtgtgcaaagagatgagctttgcataattaatttcagaatgtcggaagaaggtggcggtgatttggatgtgatgagtgatctgaagcagcaaggcatggtgcagaggagggtcatccaagatgtgaggaacagcctgtactactcgtccgcaatgtcaatggtgctagagactaatggcggaggagacatggtggcggaggcggagatgaataatggtggaggtggcgcaccatcgtcagtgctggatgagctcctgtgggagaatcggatggagcaggccgtggagcagttgatgcaggaacaggagagtggcgttctggccctgtcgctgtcggcgaggaaggcgatggtcgccgaccgcctcgcgtccgtggcggagcacccgcggacaccgcggccggagctcctccgggcggtggcggggctctgcaggctcggcgaggcgcggcgagcgaaccacctgctcttggggtactaccggcgaagcgtcctccgcggcgtggacgagctgaggcagaagcagaagcagcggaacaacaacatcatcatcatcaaggagctggtgcgcacggtgctgtccaccatcgttgaagcgtcgagaagcgtggtgtcgtcggaggcggcggaggcgaggcggtgggcgagggaggagatggacggtctgggcgtggcgttccgagagttggtgcacatggcagcagctgatggcaagctgtctctgctactggaagctgcaagatgcgccctctcctacggccctctgctgctcctgcttgatgaggagttggccgaatatctgagggagctgctcgcccggtgcatggaggaggcgctggccatgtacgccgcccatctcaggcaggtcctccgcctgctagtgctgcccgttcccgacaacgacgacgacgacgacgacgagggcgcctcctcctccatgttgctggggcgcttcctcctctcgggggtgctgagaacgtcgacgacaaaacacaactgctggtgcctgctcaccacgagcgggaggaagctggttaccctcatgcaggaagtggcggatgacgtctcgccgctgctggagctggatctcgctctcggatccacgctgctccaccttctcgcggatctcttacgagactacatgctcatgcaacttggagcaaccgccgctgccgatgacatgatgatggtctccctcctaatcaactgcaccacgctgctgtccctcttcccgctcatcgcgcgccgtatcttcacaactacatcatctcaacaaccagctgattttcatcatgccactaataataagggggagctccacctccacggcctcatcgtgtccatcaaagaagccgccgcccaagtatggacatgcttctgccaccacttcatacgccacaccatcatgtcaaccaccctacaccacaaaacacacagcagcagcagcatcaggcacggcgccaatatgccttcctctgcttttcaggtgcgttgcacttgtgcttaattacctactgatcgattacgatcaaattaacagtagattacaattacatgctcgctctcaggtgttgttcctacgggtgaggcagctgaatagtctatacggtgccatcttaaccggtgaggatggcaccatgaagaagctgttgcaagagttgatggaggctatcatactcttctacctctctgatgaggacctacatgactcttggatcatccgtcaagcatcccatgctgtcccaatacaggacacgctccttctccaggttagtttaagtttactactccatatataatcggactagattaatccatgtacatatacgggcaggtgttaattgctgaccagattctctaatcgatctgtcgcagatccagctagacgttcattttctactacaagttgcacagtttggtggcttctcctccgacgatttcagggacaatgcactggattcgctcaggaaagcacaagcgaaggtcgtgccattatcatcatttttggagcagcagcagcacgaggagtgggctgccgatgctgcaaggcacgcaatgcaagtgctgatgatggggtctcaggctgatgaggagaacagcaccgactcagtgcagaaagacgaattagcagctgatgatggtgatgagatgcagccggatgcttgggtcggagcttgcacttgtagcgatggcaagtccagcgatgagttcgtcagcattgaggatgatcaactagccattcactcggagaatgaggccggagctgctgctgctgcacaacaagtcaccatcgaagaagcaacaagtgcacaggccaaggaagagaaaaacagcagttgctcgttgcaggatcgatgacggtaaatcgtgactactgagtgctggttgggaaattcggcgcccatgagggttttccaatcagcacctatggtggttctatggttgtttctgtagtagtgtaagcaacactaagatagcagtgagccagaaattaactaagctaagcacgtacgtacgtacgtcggtacgtgtatggtgtacaccactattatatgcattcgatcagaaattaattct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0566700, RefSeq:Os08g0566700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0566700&oldid=8396"