Os08g0567000

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Revision as of 13:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0567000| Description = Conserved hypothetical protein| Version = NM_001069080.1 GI:115477898 GeneID:4346361| Length = 5066 bp| Definition ...")
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Gene Name

Os08g0567000

Description

Conserved hypothetical protein

Version

NM_001069080.1 GI:115477898 GeneID:4346361

Length

5066 bp

Definition

Oryza sativa Japonica Group Os08g0567000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28481990..28487055

Sequence Coding Region

28482194..28482289,28482367..28482432,28482601..28482696,28482781..28482856,28482938..28483024
,28483131..28483219,28483288..28483380,28485636..28485773,28485956..28486061
,28486447..28486643,28486768..28486836

Expression

GEO Profiles:Os08g0567000

Genome Context

<gbrowseImage1> name=NC_008401:28481990..28487055 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28481990..28487055 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccatggctcgccatctccctgctattcttcttctctcgtcggcgctgctcctcgcccttgcctccgcctccgcttccgctgctgctccggcgctggccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccaggccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaacccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgttgaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgattctgctacagggcttacagataaggatgatctagttattgttcattcagatgaatctccagctgttgattcaggttctgagtattttgatagtgatctcactgacttggcaaactggcttggtgggtcctatgagaaggttgatggcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccacttcaaaggcattaaggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatggaaaaattgttgggttagtaatatccacaaaggaggcttcaccatccttagtgggtccagcatcttcactgcacatttcgagatggctaaaagagacaagccaaactaacactacaatagcctcttctgagatacttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcattggggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtgaagatcgattag</cdnaseq>

Protein Sequence

<aaseq>MAAMARHLPAILLLSSALLLALASASASAAAPALAAFVDAASRR YLRDQQHHDQAASMSLDQVSAAVSVLLGFAPPPSLPAQSSSKLDKLLLPNPFDRPRAV FLLQIDGFHASVESITSEAGSIFKTTIDGLSDSATGLTDKDDLVIVHSDESPAVDSGS EYFDSDLTDLANWLGGSYEKVDGKLIIPLESGESLTLLITKEADMEFASSLISLRKTI KRGIQVHEDFSGGVMSPAELLVCHFKGIKALEEEYGSTEIVKQGTDVVRTAVTKAFDL LRGAYNGKIVGLVISTKEASPSLVGPASSLHISRWLKETSQTNTTIASSEILVRKSLA WITGIILLVSTLIGVCLLMNMPLTRDTLLYSNVKID</aaseq>

Gene Sequence

<dnaseqindica>205..300#378..443#612..707#792..867#949..1035#1142..1230#1299..1391#3647..3784#3967..4072#4458..4654#4779..4847#ggtcgcgtcgcgtcctctcctgatccccttttccttcgcccgtttgacatccgcagaaaagaaaagggaaatcctccgatcgaaatcatcgaaccgtctcttctacatcgatcgaaaagagaagaggagcggcggcgagatccaattccaatcgatccttgtgctgctgctgctgctgcgctcgacgatcccatccggatctcgatggcggccatggctcgccatctccctgctattcttcttctctcgtcggcgctgctcctcgcccttgcctccgcctccgcttccgctgctgctccggtaaaatctagtttcaaagtcttcctagtccctgctcttcctcctctaacatgtatgtattccctgtacgtacgcaggcgctggccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccaggtgataggtcccatccccaatcctctctattcctgctactctagtttcttagctgctgctcgatcgataattcctatgagttatttactttatgagtttggcggcacaatcaattcaattactctatgtgaaatctcccgttcatcatgttctatcactctgcaacaggccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccaccaccctcgctacctgcacaatcttcttcaaaggtacttcaaccttccataccctttctttacatgtctcctgccaccctacttaaccccttcatcaacttttcttacccctgtcagttagacaagctgttactccctaacccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatggtatgtctgttttgtttcatttcattatttgcacctattcatttagtgcctctattgatgtatctcttcaccatatgtcagcctccgttgaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgattctgctacagggcttacaggtttcacgaaatatctggcaacttcttatcttggaagcgcgcacatctatacttttttggaacatgccattttgttattgtaattcatttatcacatgccttgcagataaggatgatctagttattgttcattcagatgaatctccagctgttgattcaggttctgagtattttgatagtgatctcactgacttggtaagttcgtctttctttagggaggaagtggcattatgcatagcatttatggcgaacaaattttgcaggcaaactggcttggtgggtcctatgagaaggttgatggcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggtcagcaccgttttatccattgcacaaatacacaaaataggttctctttgttcatttgcacatctatgcatcttggatgcatgtgttttctttttttatgtcgcatacaacagtcctcaaaagaaggcaaaatttctctgctgattattactacactatcctcaaaacatgccagtaaactagcacttgattattactacactatcctctctgctgattcatgtaaatgacaaccatttcccctcttgaatgtatttcttttatgttaaaggcaaaatttgttacagtgtcatgacccgaggccatgacgcgataactactgccgagaggatagcggacggcattctctcctggagaagtgatgtagatttagattggggagaagaacattaggggaatagattagactaattgatattcatcgcttaactcgagataatccatcctttatatagagatgatatgactcggcccttataagaaactaactcaaactaactctatctaatcttatcctatctctgaaccaactgatacagtactcgtggtactgttcatccgctaggacttgggctcgtgggccttggcctctcagcccaatgcccatgacactacacccctctttttgagcagctcgtcctggagctgcaatgtggttctcctgacttaaacaaaacctaaaacaactaaaatccaaaccttttacatcttggctggatttgttattataaactgaaaacaaatctaataacattatggaatgactggtcgtgatggcatcatcaaaccttggtgggccccatccaaaagctgtcaaacaaaggaggatttcatgccttgtcccaagcttggaagcataattaatctgatttgaataggagctaggaaatagccttgaccagctcaaatgcacatgacggctgtaagatccttcttcctcaaactcagcccagtgtggataaagtttcttcccaggaaaaggccaatgcaacttctcaccgttggcattgccccccacgccgccaagcagttcactgcgtgcgtagcttcctgcacttgcgaaaacgacgcgcactccgtgccaacaaatcgcgagaattgcagtgcaactaactcaaactaagtctatctaatcttatcctatctcctaaccaactgctacagtacccgtggtactgttcatcctctaggacttgagcttgtgggcctcggcctcccaggcccaatgcccatgacatacaggacattcggaagtttgtggtatttgctgccagacacctaaaaaacgtgacacggctgtaggacaccccaaaaacttggtaatttgctgggggacaccgccgctgttattttatcatttacgagccaaatgaagggagaaaccatgtgaaaaggcgattttgacccttgggacagcaggttgtaacacaacttggtgtggttcaaaccaaacccaggacacattccctcccctaaacctataaaattggtggcagcaggaacggcgttgatggtggcggccattataagctgttgccacaagggcaacctcatctgttgtaaatgtttctcgcgccatttggcttggaaatgataaaataatatccgctgtgtccctcagtaaattaccaggtttttggtgtgtcctatggtcgtgtcacatttttggggtgtacagtagcaaagatggcaaactacgagtatcatgtagcaaattttgcctatgttaaaattggattaggtggtattgtaatttattactcttttttgtcggttgagattgctcaccgtgcctcagaacaataatttattacttgaagtgggctgtaatagtgtgtatcaattcactcgaaaactataagaacttaatttgaatattttttggtgataaatataaaacttgcatgtaaatttaagtgtggtactcttaccctaccatgacgttatttatttcctcttgctcatgtattatctgttaatgtcaaccagtatgctttctcatcctttcgaaacatgtactacttgaactatttcctctaataacactttctcttcttcatctcccctaaatacttgtggacaatcagaataagaattatttcatctaataacactttctctctactttatcttccctaaatacttgtgcacgatcaaaacaatccttatataaataactgagggagtacatgaccgcatttgcatttatgacatctcaaggcccaaatttcattataacttgcatttctttacaggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccacttcaaaggcattaaggtaaattgtaaacatatttttttagctagcagtttgaagatataactgatttctacaaacgtgtactaataaccttgacacctttccacctaaatcctacctatctgaacccttttatccttggtccatcaaatgattctacggtagcatgattaacttgttaatttgacgggttcatgtaggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatggtaaagttgacaaaaatttcttcagttctgttatgcatgcgtacatgcattatcccttgaagtttgttcaagttaaattctcctgcggtactcaggaacaaaggaaaaaagtgttctcatttgttcttatttggagggatggactaagagctgtaacattagctagctgcttaaagttatatttggttatgtttatgttttggaattgtccatagagaagtggatattggcccctcctcactggcaaatcagttgaacaatctagacctgcctccgtctctctctgaaggattattgtattgtagttgttacttttgctattatataatctttacatttgcagagctttggctttggttttaacagcttcgatgttctgatacaggaaaaattgttgggttagtaatatccacaaaggaggcttcaccatccttagtgggtccagcatcttcactgcacatttcgagatggctaaaagagacaagccaaactaacactacaatagcctcttctgagatacttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcattggggtgagcataattcatcaaagtttcactaattattaaatggataataattttgagcagcgccgtacagtttgtagtttatccttgtgattaaatatttctgaagactggtgtgctgattgtgcaggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtgaagatcgattagatggaattaggagggagggagagagattagcacattgatggttgtaatttccattttcacacgctgcgtggcctttatgggatggttttgacctttttgtaggccatatatgtttgacataaaaattgtgcttctgtgtgggtcagcccggccggaatgcaaaaccttgtttgtgaattgtcactgcctgtacggggcccttgttttttggttataaat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0567000, RefSeq:Os08g0567000