Os07g0102100

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Revision as of 08:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0102100| Description = Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2| Version = NM_001065215.1 GI:115470162 GeneID:4342173| ...")
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Gene Name

Os07g0102100

Description

Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2

Version

NM_001065215.1 GI:115470162 GeneID:4342173

Length

5643 bp

Definition

Oryza sativa Japonica Group Os07g0102100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:121292..126934

Sequence Coding Region

121378..122098,124616..126057,126268..126477

Expression

GEO Profiles:Os07g0102100

Genome Context

<gbrowseImage1> name=NC_008400:121292..126934 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:121292..126934 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagcagcaggggcagggggcgggtactactacagtggcgatgatgagccggaacccgagctactactactccggcgagggtgagctgagcctggcggtgcagcggcaggactcgctgtacagggacgcgagccgcgccgggcagcatgagcaggcgcatggcgaggggtgggcgcgcacgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctccccactctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggcgtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatcgccctccgcgccaacgacgacggagacggcggcactttcgccctctactccctcatctcccgccacgccaaggtcagcctcgtccccaaccagcaggccgaggacgagctccacctccacatcagcaagtcctcctcgctccgccgcccctccgtccagcgcctcgcctccaccgccgaggagcgcgcccagtgggtcaaggacctcctcgagaacagccgccccgtccgcatctccctcttcctcctcaccatcctcgccaccgccatggtcatcagcgacgcctgcctcacgcccgccatctccgtcctctccgccgtcggtggcctcaaggacaaggcgccacacctcaacactgagcaggtggtgtgggtgacggtgggcatcctggtgatgctgttcgcggtgcagaggttcgggacagacaaggtggggtacctgttcgcccccgtcgttttgctgtggctcctcctcatcggcggcgtcggggtgtacaacctcgccgcccacgacgtcggcgtcctccgcgccttcaacccaaagtacatcctcgactacttccgccgcaacggacgccacggctgggtctccctcggcggcgtcctcctctgcttcaccggcaccgaggcactcttcgccgacctcggctgcttcagcatccgctccatccagctcagcttcgccttcggcctcgtcccggccgtgctgctggcctacgccgggcaggccgcctacctgcgcgtgtacccggaccacgtcggcgacgccttctacgcgtcgacgccgcaggtgctgttctggccaaccctggtgctggcgctggcggcgtccgtggtgggcagccaggccatgatctcctgcgccttcgccaccatctcccactcgcaggccatggggtgcttcccgcgcgtgaaggtggtgcacacgtccaggcagtaccaggggcaggtgtacatcccggagatcaacctcctgctgggcgcggccgcctgtgtggtgacggtggcggcgcgggacacggtggtgatcggcgaggcgcacggcatctgcgtggtgctggtgatgctcatcaccacgctgctgctgacggtggtgatggtgctggtgtggcgggtgaacatcgggtgggtgctggtgttcgcctgcgtcttcgcctccaccgagtcggtgtacctgacgtcggtgctctacaagttcgcgcacggcgggtacataccggtggccatgtcggcggtgctgatgggggtgatgggggtgtggcactacgtgcacgtcaggaggtacaagtacgagatggagaggacggtgtcgacggagagggtgagggagcttgtgtctcggagggagctgcagagggtgcccggtgtggggctcttctacacggacctcgtgcaggggatccccccggtgttccctcacctcatcgacaagatcccctccatccacaccgtcctcctcttcgtctccgtcaagcacctccccgtcccgcacgtcgacccctcggagcgcttcctcttccgccaggtggagccgcaggagcacaagctcttccgctgcgtcgcgcgctacggctaccgcgaccgcctcgaggacgcccgcgacttcgtcgccaacctcgtggaaaggctgcagtactacgtgcgggacgtcaacctgtacggcgccgccgccaataataaggtgagctacccgagctctcgttgcgacagcatgggcatacccaagtcggcttcctacgcggagaggctgcagctgcagagggccaggtcggtggccatgctccactcgcattctcagcatcagcggttcatacagagggagatggagaaaggggtggtgttcatcctcggggagagcgaggtggtggcgaggcctcactcctccctcctcaagaagctcgtcgtcaactacgcctactccttcctccgccgcaactgcaggcagggcgacaagatgctcgccatccccaggagccaactcctcaaagtcggcatgtcctacgagatctga</cdnaseq>

Protein Sequence

<aaseq>MAQQQGQGAGTTTVAMMSRNPSYYYSGEGELSLAVQRQDSLYRD ASRAGQHEQAHGEGWARTLRLAFQCFGVLYGDIGTSPLYVYSTTFDGGIRHTDDLLGV LSLIIYSFLLFTIIKYVYIALRANDDGDGGTFALYSLISRHAKVSLVPNQQAEDELHL HISKSSSLRRPSVQRLASTAEERAQWVKDLLENSRPVRISLFLLTILATAMVISDACL TPAISVLSAVGGLKDKAPHLNTEQVVWVTVGILVMLFAVQRFGTDKVGYLFAPVVLLW LLLIGGVGVYNLAAHDVGVLRAFNPKYILDYFRRNGRHGWVSLGGVLLCFTGTEALFA DLGCFSIRSIQLSFAFGLVPAVLLAYAGQAAYLRVYPDHVGDAFYASTPQVLFWPTLV LALAASVVGSQAMISCAFATISHSQAMGCFPRVKVVHTSRQYQGQVYIPEINLLLGAA ACVVTVAARDTVVIGEAHGICVVLVMLITTLLLTVVMVLVWRVNIGWVLVFACVFAST ESVYLTSVLYKFAHGGYIPVAMSAVLMGVMGVWHYVHVRRYKYEMERTVSTERVRELV SRRELQRVPGVGLFYTDLVQGIPPVFPHLIDKIPSIHTVLLFVSVKHLPVPHVDPSER FLFRQVEPQEHKLFRCVARYGYRDRLEDARDFVANLVERLQYYVRDVNLYGAAANNKV SYPSSRCDSMGIPKSASYAERLQLQRARSVAMLHSHSQHQRFIQREMEKGVVFILGES EVVARPHSSLLKKLVVNYAYSFLRRNCRQGDKMLAIPRSQLLKVGMSYEI</aaseq>

Gene Sequence

<dnaseqindica>87..807#3325..4766#4977..5186#gaaggggcgaagcgtactccttccctgcagctgcttccatcaatacaatacaactagtgatttcgttgcagtgatcctttctgtcgatggcgcagcagcaggggcagggggcgggtactactacagtggcgatgatgagccggaacccgagctactactactccggcgagggtgagctgagcctggcggtgcagcggcaggactcgctgtacagggacgcgagccgcgccgggcagcatgagcaggcgcatggcgaggggtgggcgcgcacgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctccccactctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggcgtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatcgccctccgcgccaacgacgacggagacggcggcactttcgccctctactccctcatctcccgccacgccaaggtcagcctcgtccccaaccagcaggccgaggacgagctccacctccacatcagcaagtcctcctcgctccgccgcccctccgtccagcgcctcgcctccaccgccgaggagcgcgcccagtgggtcaaggacctcctcgagaacagccgccccgtccgcatctccctcttcctcctcaccatcctcgccaccgccatggtcatcagcgacgcctgcctcacgcccgccatctccgtcctctccgccgtcggtggcctcaaggacaaggcgccacacctcaacactggtacctacctactcctactcctactagtctagtatttgctctactccttttctattacctattaatatatttttgctttatttaatttccacgattaatctgcatgcatgtatatatcatacatatatccatgatacgtatatatacagctttgctagctagctactgtacatgtacctgtactcctgtaggtttaggttgttgctcctgcagatggcttgcttggcaagacgctgatcgaaaccgatcgatcaaacaaaatcaattaagatgattaagatgttaattaattgcaaataaagcaacatgtaactagctatatgtatgtgcggggaaaatatatatatatcttgtacacataagctttacgtccacactaattaccaaatatatcactgaaaaatctagaaaattttgtgcataagtattacacatacgtataaaatctgaacctcaaattcattgtatataaatttgtcggaatattttttttctttttatgtaggatgaatttgaaggtaggactttataagtggatgtaataactttaatacaattttttttctaactattttttttagtgatatttgttagtttggtgtgtctatggagttgatagacgtacaaaactttatatatatagatagatgatcatatagtatacacgtagctctcccgcagttaagagaaaaccacgactttggaacctctgtttgtcgttgcgttgctttcgccatcgatgctgctcctgcagtagcttcaaactcatattatctatggcctacgaccgattctgatatatccctgcatcttcatctcgatccagggatatgaatatccatgccatctgaaccatatcatgaatattattgacatttgtatattcaatctaatatgaacttggttaatatagaagaatactagtaattacaaaaaaaagggaggagctattagctcgctagatagtgtgatcgatggacatagcgatcgatatgatggagatagatatatgcaggtaattatttataatcaatcaacaaggctgggttaacgcgtagtattgtgcgtggtacctgcagcttcagatgattgatagacagacagatacagactgctagctgctattaattgcgctgatttatatccccttgtatatattggtcctgcatgcgttaattctagctaaaacatcattttccggcttaattaatcactcctttttgacccgagagggaagagtgcaggatcaatactactattagctaagcccggaccagcagtatgaatcatgcattcccatatctcgtcagtttgcagcaaaagctacaatctaattatcgggttagttgaaatagtaggaattgataaaccatacatacatgtactttgcaaggccggtgggcatatataaccacgtacatatagcaaaagtgtcaaaaccgatctcgattatgtcatatcatattatgactttacgatcctaactaaagtgtttgatttttatgattttatataggtataaatatatcattttcacgatttttatgtttacgattttataattgtaatcctacttagaacttcctattttaattcagggtcacgattttaaatactaatgctcacaaatattatgtacatgtatgtgggttttcaatataattttagtggggttagagatgtaccaatgaattgtactccctccgtttcagtttataagatgttttgactttaatcaaagtcaaactgttttaagtttgaccaagtttgtagaaaaaaagtagtaacattttcaacccaagataaatttattatgaaaatatattcaattattgatttgatgaaactaatttagtattatatatattactatatttatctataaacttagtcaaatttaaaacagtttaattttgactaaagtcaaaacgtcaaataacctcaaacggagggagtagtgtaaatagagataaaagtgtcagtcaatggtacagagcttacaaagcgagcttgcaatagtattccataagtgtgtttagttcacgttaaaattagaagtttggttgaaattggaacgatgtgacgaaaaagttagaagtttgtgtatgtaggaaagttttaatgtgatgaaaaaattgaaagtttaaagaaaaaatttgaaactaaacacggtcataactaagcatctaggagtatctatcacctacagtacacacagtactgtacatctttaatttggtgtgaaacctgtgaaaaatatatttgatgcagacataaggtcgacacctatgcagtactgtcaccatcgttcactgcttcaacacagtcaacgtataattgctacaaaatgaatccatccatgtcatatatagtacgtagtagaagtattcagtaattagtatgtcggtacaagtagatattcatgtgaagaaagaattattatatttataaaaacatttgaatttgaatagttaaactaataagatgagaatggaatggaatggaaatgcattgcagagcaggtggtgtgggtgacggtgggcatcctggtgatgctgttcgcggtgcagaggttcgggacagacaaggtggggtacctgttcgcccccgtcgttttgctgtggctcctcctcatcggcggcgtcggggtgtacaacctcgccgcccacgacgtcggcgtcctccgcgccttcaacccaaagtacatcctcgactacttccgccgcaacggacgccacggctgggtctccctcggcggcgtcctcctctgcttcaccggcaccgaggcactcttcgccgacctcggctgcttcagcatccgctccatccagctcagcttcgccttcggcctcgtcccggccgtgctgctggcctacgccgggcaggccgcctacctgcgcgtgtacccggaccacgtcggcgacgccttctacgcgtcgacgccgcaggtgctgttctggccaaccctggtgctggcgctggcggcgtccgtggtgggcagccaggccatgatctcctgcgccttcgccaccatctcccactcgcaggccatggggtgcttcccgcgcgtgaaggtggtgcacacgtccaggcagtaccaggggcaggtgtacatcccggagatcaacctcctgctgggcgcggccgcctgtgtggtgacggtggcggcgcgggacacggtggtgatcggcgaggcgcacggcatctgcgtggtgctggtgatgctcatcaccacgctgctgctgacggtggtgatggtgctggtgtggcgggtgaacatcgggtgggtgctggtgttcgcctgcgtcttcgcctccaccgagtcggtgtacctgacgtcggtgctctacaagttcgcgcacggcgggtacataccggtggccatgtcggcggtgctgatgggggtgatgggggtgtggcactacgtgcacgtcaggaggtacaagtacgagatggagaggacggtgtcgacggagagggtgagggagcttgtgtctcggagggagctgcagagggtgcccggtgtggggctcttctacacggacctcgtgcaggggatccccccggtgttccctcacctcatcgacaagatcccctccatccacaccgtcctcctcttcgtctccgtcaagcacctccccgtcccgcacgtcgacccctcggagcgcttcctcttccgccaggtggagccgcaggagcacaagctcttccgctgcgtcgcgcgctacggctaccgcgaccgcctcgaggacgcccgcgacttcgtcgccaacctcgtggaaaggctgcagtactacgtgcgggacgtcaacctgtacggcgccgccgccaataataaggtgagctacccgagctctcgttgcgacagcatgggcatacccaagtcggcttcctacgcggagaggctgcagctgcagagggccaggtcggtggccatgctccactcgcattctcagcatcagcaacagcctctgcctcagcagctgggccagctgcttcagtactcggcatccacgggagagcagcagcgccgctccgtttacgcggaggagatgcttactccggcggagtcgttctcggagatggggacgatggcggcgagcgggcggcagctgatggcggtggcggtgaagatgagcctggaggagatggcgcggatcgaggaggagcagcggttcatacagagggagatggagaaaggggtggtgttcatcctcggggagagcgaggtggtggcgaggcctcactcctccctcctcaagaagctcgtcgtcaactacgcctactccttcctccgccgcaactgcaggcagggcgacaagatgctcgccatccccaggagccaactcctcaaagtcggcatgtcctacgagatctgatcgatctctcatgcatcccccatccattccttcataagcaaaccttccttaattattgctttcatttcttcttccttcttcattatttcaatctcgatccatctactctactactagttcttcatttcttctctgctactccagtatactccactggttatggttagtactagcagctaagctaagctaagctagcttcataactataagtgcctttattgatgcatgcatgccagtatatatagtgatcatatatatacatacacatatactagcggaggagtatgtaactagttgctagtattgctgattgataattaattgtacaattggatgcatgggatgggagaccactgaattgatccaggttcttcctacatgtttgtatgtatgtatgcttgtagaagcttgcacagatatattgatcatatgattgtcaattccttgttgcaacctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0102100, RefSeq:Os07g0102100