Os07g0102400

From RiceWiki
Revision as of 08:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0102400| Description = Protein of unknown function DUF1084 family protein| Version = NM_001065218.1 GI:115470168 GeneID:4342176| Length = 3...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0102400

Description

Protein of unknown function DUF1084 family protein

Version

NM_001065218.1 GI:115470168 GeneID:4342176

Length

3037 bp

Definition

Oryza sativa Japonica Group Os07g0102400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:146148..149184

Sequence Coding Region

146406..146498,146616..146693,146967..147020,147729..147792,147900..148018
,148207..148276,148363..148457,148544..148596,148746..148836
,148956..149099

Expression

GEO Profiles:Os07g0102400

Genome Context

<gbrowseImage1> name=NC_008400:146148..149184 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:146148..149184 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagccggtggtcgtggcagcttcttctgcggcggcgttgcggggtttctgggaggaagtcaacgagtcgccggcatggcaggacggcgccttcttctccctctccgccgcatacgccctcgtctccgccgtcgcgctgattcaattgatcaggatccagcgccgagtgcccgaattcggatggaccacgcagaaggtctttcacctcatgaacttccttgtcaatggagtccgtgctctcgtctttggattccatctccatgtcttccttctctccgcaaaagtttataagttggtgctgctagacctccccggcttgttgtttttctccacctacactctgcttgttctcttctgggcagaaatataccatcaggccaggagcctcccaacagataagttaaggattatatacatagccgtcaatgccatcatttacacaattcaggtttgtatttgggtatacctcggaatcaacgacaacccattggttgagctggtcagcaaaatcttcatagtagttgtctcttttgtggctcttcttggcttttcagtatatggtggaaggctgttcttcttgctgagacgtttccccattgaatctaaggggcgaaaaaagaagctttatgaggttgggacagtgactgcaatctgctgtgcttgtttcctgataaggtgcatagtggtggcgatatcagcatttgattctgatgtatctctggaggttttggaccatccaattcttgatttcttctactatatgttgacagagatactgccttcagctcttgtccttttcatcctccggaagctccctcctaagcgggtgtcagcgcagtaccacccaatcaactag</cdnaseq>

Protein Sequence

<aaseq>MREPVVVAASSAAALRGFWEEVNESPAWQDGAFFSLSAAYALVS AVALIQLIRIQRRVPEFGWTTQKVFHLMNFLVNGVRALVFGFHLHVFLLSAKVYKLVL LDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDKLRIIYIAVNAIIYTIQVCIWVYLGI NDNPLVELVSKIFIVVVSFVALLGFSVYGGRLFFLLRRFPIESKGRKKKLYEVGTVTA ICCACFLIRCIVVAISAFDSDVSLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPK RVSAQYHPIN</aaseq>

Gene Sequence

<dnaseqindica>2687..2779#2492..2569#2165..2218#1393..1456#1167..1285#909..978#728..822#589..641#349..439#86..229#atcctctcctctcgcatcgcaactcgcgcgcacacagaaaaagaaaaaaagaaagagtcaaggggagggaaggcgagagagagagatgagggagccggtggtcgtggcagcttcttctgcggcggcgttgcggggtttctgggaggaagtcaacgagtcgccggcatggcaggacggcgccttcttctccctctccgccgcatacgccctcgtctccgccgtcgcgctggtccgtctcccaaactctcattcattcacctatagctactcgatctcttcgccgacgaattagctcacctcacctgcaatatacgtactatatatatattcgatttgatttgagtgcagattcaattgatcaggatccagcgccgagtgcccgaattcggatggaccacgcagaaggtctttcacctcatgaacttccttgtcaatggaggtaatgcaacgtcccacgatcccatccccttttcttttcttcttcttattcttattaattcactcgcgtttgctgatgcttcgtatcataatttctggagtaatttttactgttccttcacaaattaaacacttgtctttctgctgcagtccgtgctctcgtctttggattccatctccatgtcttccttctctccgcaaaagtaagaccccacttacttgaatactagtactactaaaaactaaccatcaacaactgattgattgatcaaaaagccggcctccacaggtttataagttggtgctgctagacctccccggcttgttgtttttctccacctacactctgcttgttctcttctgggcagaaatataccatcaggcatgcttgcttttcaccatcccctttttcttcactgcccatctgttatccattattccaatcagtgaatcatctcatttttgcaggccaggagcctcccaacagataagttaaggattatatacatagccgtcaatgccatcatttacacaattcaggtctgttcagtctcatctttgcacacacttatatactagctgtagtagcttcttctcttcctgtaaaacctatcttcataagtatctagtaccttttctgtgtcccaagtgatgttgcttaggtacatcgtctttcttaactagctataaagcctagaattgctacatctcattgggcttgtcgacaggtttgtatttgggtatacctcggaatcaacgacaacccattggttgagctggtcagcaaaatcttcatagtagttgtctcttttgtggctcttcttggcttttcagtatatggtggaaggtaactccacgtccaaagccttgtgcccatattctattctctgccttaattgttcactatttatttccttttctgaatgaattgtaagctctgttaatctgtgataggctgttcttcttgctgagacgtttccccattgaatctaaggggcgaaaaaagaagctttatgaggtgcctgcgcgcttcaaaacttgctctaattaaacatatttcctgtttggtgcacatagaactggctgttgtaaataaatttatctgtttgattagttgttcgagcctatcatttggctgatatttagccacaccaatattagttcttattcaatactagaaaatgaggagcattgaacactgaattgcttgttatgtttatatgttgtcatgtagtcctgtaactgttatatgttgtgttgccttacccttttgcataacaactctaatttatgatataactatcctttaatagtgcctaactagcatgatgcatttgtttgtgtgtgaaactaaaagagctacaactctagtgcttttgttaatagtcggatatacagttgttattgtcataaaactgcagttaaatgtatttgaccaatgcacagctataatctggacccacctcaatcgatggtggataatactatcttttgtccaccagttaaacatggttattttcagcccttgagaggaatcatcgttcttctcgttatttgtttgtttcagtaattgattagaatagaaaattgaaaaaaatctttaatagttgtgtggtctacagactttacattgcttgtcacagattgcaacttggagtggaaacatttaaactgttttgtggctacagaattttcattctaccgttgtttttttgaaatgtcacaggttgggacagtgactgcaatctgctgtgcttgtttcctgataaggtgcatagtggtaagtacttgattcatcatgactcattgataggcattcaagtatcaagaatcacacttatttttctggttggtctgaaagggaactttgatgttgacctattgtgagaacgtgaaacatatcaactatggagtgttgtgctaagagcactatatttatggtttacaaatactgttccgaaacatcggacatatatatagatatatgtggtttcgttttttgttcttgtaataacgagagtttctccttgcttttggtttgacttgattgtaggtggcgatatcagcatttgattctgatgtatctctggaggttttggaccatccaattcttgatttcttctactatatggtaagcaactactagtccagtaattaagacatttggaactggtacatactagtagagtatcgataaatgcctgccctggactagtgctcatgtgcattatggatttatggtgtacagttgacagagatactgccttcagctcttgtccttttcatcctccggaagctccctcctaagcgggtgtcagcgcagtaccacccaatcaactagctagaggcctcctagttagttactacataatatgatgttattatatactactgtacttagtatgttagttatgggaaaactttgaactcctcccaaaaagaagaaagaaaacaaactagaattgcgcctggcaagcaggagcgggatgctggtagtgctttgagctgtaaatgattgaaagcgtcaacaaggccttgttacttggatggatagtcagctgctccattaatgatgaatgaattttggtgcttgtgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0102400, RefSeq:Os07g0102400