Os07g0102500

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Revision as of 08:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0102500| Description = Lupus La protein family protein| Version = NM_001065219.1 GI:115470170 GeneID:4342177| Length = 3715 bp| Definition...")
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Gene Name

Os07g0102500

Description

Lupus La protein family protein

Version

NM_001065219.1 GI:115470170 GeneID:4342177

Length

3715 bp

Definition

Oryza sativa Japonica Group Os07g0102500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:153882..157596

Sequence Coding Region

154119..154541,154673..154741,154875..154922,156104..156185,156365..156444
,156606..156677,156827..156921,157068..157515

Expression

GEO Profiles:Os07g0102500

Genome Context

<gbrowseImage1> name=NC_008400:153882..157596 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:153882..157596 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcgcagcaggagagcatcagcagcggtggtgacggcaacaataataataataagcaggtggcggtggtggttgttgaggaggcgtcgacgccgtcgtcggccttcaagttcaacgtgcacgcgccggagttcgtgcctgccatgtcgccgacggccagtccgatgtcggcgcccgccggcagcagcagcttctactcccccttcgggctccacgtgcagcccgatcactggagcttcttccatgaccacgagcccgtcttcttcatgcccgacttcaagttcgccgccgccgccgccgccagcgcgcagcccaagcccacctccgccgccgacatgccccacaagatcgtcaagcaggtcgagtaccaattcagcgacattaacctcgtcgccaacgagttcttgctcaagatcatgaacaaagattctgaaggttacgtccccttatccgtgattgcttcttggaagaagatcaagtctcttggagcaaccaatcaaatgctggtcaaggctcttcgcacctccaccaagctgattgtgagtgatgacggcaagaaagtccggcggaggcagccattcacggagaagcacaaggaggagcttcagtcaaggatgatcatagctgagaatttgccagaggactcatcgagaaacagcctggagaaaatcttcggtgtcgttggaagtgtgaagaacataaagatgtgccaccctcaagagcctagcacggcaagagcttccaagtcagacactctagtcagtaacaagatgcatgcactggtggagtacgagagctcgcagcaagctgagaaagcagtggagaagctgaacgacgaacggaactggaggaaaggccttcgggtgcgcaccgtcctcaggcgatcgcccaagtcggtgatgaggctgaagcggacggagttcgacctcaactcggacgacgagcagtcaccgatgtcgtcggacttatcccccacggcgacggcgacggcggcggagttgtcggcggaggcggcgggtcacgatcagggcggggagcagcagatgatgaacagcagcaagaaaggaggagggtgggcgcgagggggccgagggaagctgcaggtggcggcgccgcacagcccgcagtcggcccccgccggcagtgtggggcacttcgagccggcgagccctcgtcacaagctgccggcgagcccccgccacaagtgcccctccagcccacgccagccgcctcctcacgcccacggccccaggatgcccgacggcacccgcggcttcaccatgggccgcggcaagcccctccttgtctag</cdnaseq>

Protein Sequence

<aaseq>MATAQQESISSGGDGNNNNNKQVAVVVVEEASTPSSAFKFNVHA PEFVPAMSPTASPMSAPAGSSSFYSPFGLHVQPDHWSFFHDHEPVFFMPDFKFAAAAA ASAQPKPTSAADMPHKIVKQVEYQFSDINLVANEFLLKIMNKDSEGYVPLSVIASWKK IKSLGATNQMLVKALRTSTKLIVSDDGKKVRRRQPFTEKHKEELQSRMIIAENLPEDS SRNSLEKIFGVVGSVKNIKMCHPQEPSTARASKSDTLVSNKMHALVEYESSQQAEKAV EKLNDERNWRKGLRVRTVLRRSPKSVMRLKRTEFDLNSDDEQSPMSSDLSPTATATAA ELSAEAAGHDQGGEQQMMNSSKKGGGWARGGRGKLQVAAPHSPQSAPAGSVGHFEPAS PRHKLPASPRHKCPSSPRQPPPHAHGPRMPDGTRGFTMGRGKPLLV</aaseq>

Gene Sequence

<dnaseqindica>3056..3478#2856..2924#2675..2722#1412..1493#1153..1232#920..991#676..770#82..529#cttcgctagctatcgatcgatcggtcgatccaagctgcagacacaatattaattcaattcaattgaattcttcgatcatccatggcgacggcgcagcaggagagcatcagcagcggtggtgacggcaacaataataataataagcaggtggcggtggtggttgttgaggaggcgtcgacgccgtcgtcggccttcaagttcaacgtgcacgcgccggagttcgtgcctgccatgtcgccgacggccagtccgatgtcggcgcccgccggcagcagcagcttctactcccccttcgggctccacgtgcagcccgatcactggagcttcttccatgaccacgagcccgtcttcttcatgcccgacttcaagttcgccgccgccgccgccgccagcgcgcagcccaagcccacctccgccgccgacatgccccacaagatcgtcaagcaggtcgagtaccaattcagcgacattaacctcgtcgccaacgagttcttgctcaagatcatgaacaaagattctgaaggttacggtacgtacgtcattccattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatactcctatatatatttctgcttgctagcttaattagctcctaaaaccgtacgtgattttgcattcagtccccttatccgtgattgcttcttggaagaagatcaagtctcttggagcaaccaatcaaatgctggtcaaggctcttcgcacctccaccaagctggtaatcaacaaactaactaattaagcatcgatcgatcgatcgatcgatatagttagtatatggttcatcgaatatatacttgctttgggtacgtacatactccgatccatctgtgtgttttcgttaatatatatatttcgtgcatgcagattgtgagtgatgacggcaagaaagtccggcggaggcagccattcacggagaagcacaaggaggagcttcaggtctcatcactctgctctctctctgtctcgatgcatgtgtatatctgattaattagctagctagctatatatagtgacaatcaaattaaaattaaacaaatatatatgatacttaaattaattaattgttggtgcacgtttatacgtacgcgcgcgcgcagtcaaggatgatcatagctgagaatttgccagaggactcatcgagaaacagcctggagaaaatcttcggtgtcgttggaaggtcaggaagtgccgccgggcctcagatagtcgtgttgcatgcttcccacattgtatacgagtgtattgttttgtgtgtattatattactactacgttgttgaaataaattatattactacttggcgtgcatatatatgtgaaaaatcgatcgatggggtgggccggcatgcatgtgcagtgtgaagaacataaagatgtgccaccctcaagagcctagcacggcaagagcttccaagtcagacactctagtcagtaacaaggtatttatatgttgagtagtactttgttaagctatatatacatcactgtttgtttgtacttttcttttaactactcacaccagatagtgcgaagttcatattgatatagtaggaaaaaaaattataagattacaaccctcggagattgtaaccaggaaaaacaaagaaaacaaatacaccgctaccgagagttagtatatctcctcacaccacaccctggagaagacactagcacaaaatcaaccaccgctaagcgtgattgatcgccactaggctaacaaggggggttgcaaatgccccgcctaacaccgattcaacccagaaggacatcgaaagacttacggttatcctcatgtagagagattgaggagagggagaaggcgagagagaaggagatccactcgtccctcgcctcaacttgatgtagacatccgagagccgtgagcggcaaataagagagaaggcgatgaaggcaaggaacaggacctcctagacagcgccttcagaaagaccatggcatcttagacttcatcgttacccgttcagaaggacttggttttcacatggagggccctgtcaagggtgaaagggtagtcgctcgatagtgccgcaaaggggaacgcggcgtccgaaaatgtcgccattgccagcccgagtagtcccaagctaggctttcacctgcaaaccgccccacgacaccagtctttgccactctcaagctctgccacctgcacaacctctgccacaccaggcaccaacaccccaccaccagccaagcctgtcctggactctcatggacacaggctgcaacggccttcctgttgtcgtggtgagccgaatccatcgcgccaaaccactccggccgccggtctccgcacccgactcgtgctccgcctcccgcaccgaggaggagcttcgttggggttgattttcccgccaccgccttctcggctggccgctagctcgggctccggtggcaaggaggggtaaggggggtggcagtgtgggcggctagggtttcgctcatgagccgcccgcgcaagagcgacatggttttttttttttgcagcaataaagtttgtttgtattgtagcagacgactcactcagaaattccatggtagaaactaattaagatgcatgcagtaactggtgttattgacgtatgttcgttgtgtgtagatgcatgcactggtggagtacgagagctcgcagcaagctgagaaagcagtgagtagagtagagtagtcgttttgtttttccagaagaatatatatatatatatatatatatatatatacagtatgtgaatatacgcaagctaggagaaaagaaatcaagtggaatgcatgcatgtatgcaggtggagaagctgaacgacgaacggaactggaggaaaggccttcgggtgcgcaccgtcctcaggcgatcggtactaaattaatttttatatatgatcgatcccaaattaaactataataaccgtccgggcaattggatcatcaaattaaatttaaattttgaaatgatttttgatgcatgcatggtcgcgtcggtggacagcccaagtcggtgatgaggctgaagcggacggagttcgacctcaactcggacgacgagcagtcaccgatgtcgtcggacttatcccccacggcgacggcgacggcggcggagttgtcggcggaggcggcgggtcacgatcagggcggggagcagcagatgatgaacagcagcaagaaaggaggagggtgggcgcgagggggccgagggaagctgcaggtggcggcgccgcacagcccgcagtcggcccccgccggcagtgtggggcacttcgagccggcgagccctcgtcacaagctgccggcgagcccccgccacaagtgcccctccagcccacgccagccgcctcctcacgcccacggccccaggatgcccgacggcacccgcggcttcaccatgggccgcggcaagcccctccttgtctagctccgatccagtcacatcacatctctacgtgtacgattgcatacatgccatggatacttcaggccctcgatcgatcttctctcctttcattttctcctcttctcttctcttcttcttcttcttctttctttattttttggattttcacaccccttaaataaagagcaacggactggctgtctgctatatcatattcaaatacttcaaggttataatattttttttgttaccccagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0102500, RefSeq:Os07g0102500