Os07g0104500

From RiceWiki
Revision as of 08:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0104500| Description = Haem peroxidase, plant/fungal/bacterial family protein| Version = NM_001065228.1 GI:115470188 GeneID:4342187| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0104500

Description

Haem peroxidase, plant/fungal/bacterial family protein

Version

NM_001065228.1 GI:115470188 GeneID:4342187

Length

3031 bp

Definition

Oryza sativa Japonica Group Os07g0104500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:258712..261742

Sequence Coding Region

258788..259201,259297..259462,260938..261443

Expression

GEO Profiles:Os07g0104500

Genome Context

<gbrowseImage1> name=NC_008400:258712..261742 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:258712..261742 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggatcatgaattgcgagctgcagcagtggtgatggtggtggtggtggtgctgggcatggtgtcgacgtcgtcggcgcacgtgttcgtgggggcgtacaacacgacgtgcccgaacgcggaggacatcgtgtacaaggagatgaccagcatcctcgccaagtcgccggagctcgccgggccggtgctgaggctcttctccgtggactgcttcgtgggcggctgcgaggggtccatcctgctggactcgacgccggggaacaaggcggagaaggactcgccgctgaacaagggagtgaaagggtacgaggtggtggacgccatcaaggccaagctcgacgccgcctgccccggcatcgtctcctgcgccgacaccctcgccctcgccgcccgcgacgtcgtgcgcctgacgaaagggccgtacatcccacttccgacaggtcggagagatggcaacagctctaacgccgccgatgtggccgccaactctcctgcccccggcgccaccgtcaacgacctcctcaccatcttcgccaagttcaacttcaccgccaaggatcttgccgtcctctcaggtgcgcacacgatcggcaaggcccactgctccgccttctccacccgcctctacagcaactcctcctccaacggcggccccacgctggacgccaactacacgacggcgctccgcgggcagtgcaaggtcggcgacgtggacaccctcgtcgacctcgaccccccaaccccgaccaccttcgacaccgactactacaagcaggtggccgcgcagcggggcctcctcgccaccgacgccgcgcttctcctcaacgccgacaccaaggcctacgtcctccgccaggccaacgccacctccgacgacgagttcttcgccgacttcatcgtctccttcgtcaacatgagcaagatcggcgtgctcacccactcccacggcgagatcaggcacaagtgctctgctgtcaacccgccgtcgccgccgtcctccgccgccgcctccatgctcgccacctcgctcgccggctcgcttctcttcctcctcgcgggggtcctcgtgctgctcttctga</cdnaseq>

Protein Sequence

<aaseq>MAADHELRAAAVVMVVVVVLGMVSTSSAHVFVGAYNTTCPNAED IVYKEMTSILAKSPELAGPVLRLFSVDCFVGGCEGSILLDSTPGNKAEKDSPLNKGVK GYEVVDAIKAKLDAACPGIVSCADTLALAARDVVRLTKGPYIPLPTGRRDGNSSNAAD VAANSPAPGATVNDLLTIFAKFNFTAKDLAVLSGAHTIGKAHCSAFSTRLYSNSSSNG GPTLDANYTTALRGQCKVGDVDTLVDLDPPTPTTFDTDYYKQVAAQRGLLATDAALLL NADTKAYVLRQANATSDDEFFADFIVSFVNMSKIGVLTHSHGEIRHKCSAVNPPSPPS SAAASMLATSLAGSLLFLLAGVLVLLF</aaseq>

Gene Sequence

<dnaseqindica>77..490#586..751#2227..2732#gcatcacacgtacacatctatccatcgatccagtccgccccgcagcagcagcagatagctagctagctagcaaacaatggcggcggatcatgaattgcgagctgcagcagtggtgatggtggtggtggtggtgctgggcatggtgtcgacgtcgtcggcgcacgtgttcgtgggggcgtacaacacgacgtgcccgaacgcggaggacatcgtgtacaaggagatgaccagcatcctcgccaagtcgccggagctcgccgggccggtgctgaggctcttctccgtggactgcttcgtgggcggctgcgaggggtccatcctgctggactcgacgccggggaacaaggcggagaaggactcgccgctgaacaagggagtgaaagggtacgaggtggtggacgccatcaaggccaagctcgacgccgcctgccccggcatcgtctcctgcgccgacaccctcgccctcgccgcccgcgacgtcgtgcgcctggtaactaactaatcattaggatcgagttcttgtacgtcatcatgattcatgaaccagcagtaactaatgcaaatatatatgccatgcctgaacagacgaaagggccgtacatcccacttccgacaggtcggagagatggcaacagctctaacgccgccgatgtggccgccaactctcctgcccccggcgccaccgtcaacgacctcctcaccatcttcgccaagttcaacttcaccgccaaggatcttgccgtcctctcaggtacatacgcacacactctatacatatgtacgttccgtaatttagtcctatcagatgtactgtatgtttaatttacactaaggcgctgttctattcttcagctttcttattttccgttagcacgctttttaatggtgtgttattttaaaagtttctatatagaagttatttaaaataaataaataaatccattttttttaatttataacagttaatacttagttaatcatatgctaataatgtttctcgttttgcgtgccataaaaatccatatgatttttataataacttttcaatataactttttttaaaaaaacacggcgtttagtagttttggaagcgagcgcgtggaaaatgagagagtaaaagtttgaaaaggtaaagaaagtcccattttatatatatagttgtcatcaacctgttgtacatacattgtgtatgaggtcatgtcgttgtatgcatggtaaaagtgggactgtgaaggagagaagctagtggtcgatcctatttatctcaatttctaaatataagtattcttaggacttaaatttatacacaatataagcattttgaagacattgattatgagaatcccagcatttttaaccaatcaggtgtttagaagggaatccaagtaatttaaaatttaaaatttaaccaacaaagtgacaaataaataatgtttctcttatcttaatctttgctaaataacttagaaagaatttcttatgtttagaaacagaaggagaatcatacaccctctgttctaaaaatatatatatataattcttagaagttagtttttcttggggctaagggagtatatactctagggagttttcttttggcttctctacaaagtgcttcagtatctaaattaagccggagatttagtgggttggactcaataagagtgcaatctaaataagaagtctatttttatgtcagctcaattgcgagtcaagtttcaatcccacccctcaattacaaaaccggatatatgtcatctctcaacttttaaaactagtgcaaataaatcactgaatagaatagtgaacagttttggcaaccgtggcactttatatggcacgttggcctgatcttttaggtgatgtggcacaaggtagcattttagttcgaaagaggcacggaggtgacacgcgctcttaataatttcaaggtattcagtttgcactggttttagaagttggggatcctccagacatggacacatggttttgcggttgagagatgaaaaagaaacttggacaccatagctgagagaggtgaaatgaactttattcgttatgcacatggtaggctttctattgggccatttcccaaaatcccaacctccacctcacgcagcatgaataggacctgcctgtccacctcatagcatgaatctgacccattgagactagtatgtaaattaggcccatcatgacatttggggttgggttgggcatttgcaggtgcgcacacgatcggcaaggcccactgctccgccttctccacccgcctctacagcaactcctcctccaacggcggccccacgctggacgccaactacacgacggcgctccgcgggcagtgcaaggtcggcgacgtggacaccctcgtcgacctcgaccccccaaccccgaccaccttcgacaccgactactacaagcaggtggccgcgcagcggggcctcctcgccaccgacgccgcgcttctcctcaacgccgacaccaaggcctacgtcctccgccaggccaacgccacctccgacgacgagttcttcgccgacttcatcgtctccttcgtcaacatgagcaagatcggcgtgctcacccactcccacggcgagatcaggcacaagtgctctgctgtcaacccgccgtcgccgccgtcctccgccgccgcctccatgctcgccacctcgctcgccggctcgcttctcttcctcctcgcgggggtcctcgtgctgctcttctgatcgatccatcgatcgatctcacacattttacatgcatgcgtgcgtgcaaattggacaaactgttgtactgattgttcgtacgtcgtttcgtcgtcatttctggatttgttttacaaaaaccaatgatttttccttgattttcttttaatttgtcatgtgtgcagggttataacccttgtttgtttacttaatttccaaagggacaaatttgtatcttgggagatgaaatctccgattgttgtaactgtggccggacggacgtcaatcaagggccaaatgaatcgtgatttgttgtgaat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0104500, RefSeq:Os07g0104500