Os07g0108100

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Revision as of 08:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0108100| Description = Peptidase C1A, papain family protein| Version = NM_001065249.2 GI:297606597 GeneID:4342208| Length = 1329 bp| Defin...")
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Gene Name

Os07g0108100

Description

Peptidase C1A, papain family protein

Version

NM_001065249.2 GI:297606597 GeneID:4342208

Length

1329 bp

Definition

Oryza sativa Japonica Group Os07g0108100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:437332..438660

Sequence Coding Region

437332..437367,437496..437554,438102..438235,438329..438660

Expression

GEO Profiles:Os07g0108100

Genome Context

<gbrowseImage1> name=NC_008400:437332..438660 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:437332..438660 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggagaggagcagcagcaagtcatcttcttcatggccttgctcaccatgtcggaagatccaataccacgaggctccagggctcctctctcagggtgctgtcagggggacttgaactcaaattattattaaggcctcgtaacaacaccatggcagcagtgtctataggacctgcattgcttggatatcagcggtatgccacaaacattgcagaagaaccacaaccactacctaagctcatgaagacaagcgatgacgatgagaggatgaatctgactgaggaggaggaggcggccctgaaggtgagacaccaagagtggatgaacaagttcaaccgcgaatacaaagacgaggcagagaaggcttatcgctttgagatattcaagtctactgtccgatttgctgagaagttcaatgctgaacaagtgaaagagcatgggtattgcaaatgcatactaggtaccacccaattcgcagatctcactctagaggaattcggacactgggttgatggtcgtacggacacttttggcccgcctaaggtcactaaatttgattaa</cdnaseq>

Protein Sequence

<aaseq>MRRGAAASHLLHGLAHHVGRSNTTRLQGSSLRVLSGGLELKLLL RPRNNTMAAVSIGPALLGYQRYATNIAEEPQPLPKLMKTSDDDERMNLTEEEEAALKV RHQEWMNKFNREYKDEAEKAYRFEIFKSTVRFAEKFNAEQVKEHGYCKCILGTTQFAD LTLEEFGHWVDGRTDTFGPPKVTKFD</aaseq>

Gene Sequence

<dnaseqindica>1..36#165..223#771..904#998..1329#atgaggagaggagcagcagcaagtcatcttcttcatgtacacatatatatgccttcttttcattctctagatctctttcttacacacaatgcatacatgcactctccaaattaatattgtaaagcgactgatttttcctggggatatatataattttgatccagggccttgctcaccatgtcggaagatccaataccacgaggctccagggctcctctctcaggtggttttcttgctcaatctgtcaaaaaccacaaatttctataaactataatttacaaaggttttctttcaacataaattattgattttgccgaatcctattctgttaacctttgatctgattgtaaccccaaacaaaaagactagtgattcttatccgggattctaggatgactatttcttctcaccaattccatcagttggatccctgagttcagtaaattatatcaactgttctgtgaagttcttcttcttcttcttttttttgtttccattagataacaaaacagtgatgcttcagaatttagagtatttaccatctttctcatcaatggacgatgccacttgacatgtattaacgagtattgtcatggcatatgtaccctactatttttctactcggtgctatgtagcaaagagtttgcagtttaccgctttacaaacagaaaaggttaaaacaataagatcttgtagtatttatcacccattagcctacatattaattacctatctatgtgtacatgcaaatttgctactaactcttgcagggtgctgtcagggggacttgaactcaaattattattaaggcctcgtaacaacaccatggcagcagtgtctataggacctgcattgcttggatatcagcggtatgccacaaacattgcagaagaaccacaaccacgtacggacagcttaaaatctttctttggtttcctgacatgcatatatgttcatcgatccctttttgtcataattaaccatagtaactgtctagtacctaagctcatgaagacaagcgatgacgatgagaggatgaatctgactgaggaggaggaggcggccctgaaggtgagacaccaagagtggatgaacaagttcaaccgcgaatacaaagacgaggcagagaaggcttatcgctttgagatattcaagtctactgtccgatttgctgagaagttcaatgctgaacaagtgaaagagcatgggtattgcaaatgcatactaggtaccacccaattcgcagatctcactctagaggaattcggacactgggttgatggtcgtacggacacttttggcccgcctaaggtcactaaatttgattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0108100, RefSeq:Os07g0108100