Os07g0109600

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Revision as of 08:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0109600| Description = Leo1-like protein family protein| Version = NM_001065260.1 GI:115470252 GeneID:4342220| Length = 5633 bp| Definitio...")
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Gene Name

Os07g0109600

Description

Leo1-like protein family protein

Version

NM_001065260.1 GI:115470252 GeneID:4342220

Length

5633 bp

Definition

Oryza sativa Japonica Group Os07g0109600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:527706..533338

Sequence Coding Region

527706..527747,529086..529265,529376..529507,529879..530055,530536..530718
,531192..531306,531770..532128,532700..532939

Expression

GEO Profiles:Os07g0109600

Genome Context

<gbrowseImage1> name=NC_008400:527706..533338 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:527706..533338 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcggcgacagggagagggatgtcgaggaggagacgaggaaccagatgatgcagaacctcttcggcgaccagtcggaggacgaagaggatgacgacgaggccgtcgaggtcgtcgacgaggacgaccacccgcatccgcagcagcagcagctgcttcgccaccaggtggtggacgacgacgacgacgaagacgacgtccgtagcgaaggccatgcccgctccggctaccactcggaagaagtggaaggtgaggctgataatggaggggaaggtgaagcggaaggagaaggtgaaagtgaggggcaagttgggatggaagaagaaagcgaagctgaagctcatcaagctgatcttgatcaaggagaaagtgatggggaaaaggtccagagctccccagaaagagaatttagtgaccgggtgatgcaaaatgatgcagcaggcatggatagtgaagacggaggctatcagcagtggccagtagctagcggaagaagaggagttgttgcctctgaatctgaagggtctgaagatgactattatgctggccgaggtcatgaagatgaggaacctcatcaaacaaggaaaacaccaagctcgccagttgaggaggagagagatcatgaagttgtccgtgatgtatttggtgaaagcgatgaagatggacctgctccatatcgtgatcaacatgaaattgatgaagattcccatagatcacctatggaagatgaaggtcactatgagaaggatttgcagcctgaggatgtagtagctgatgaagatatgagatatgaatcagatgaaaatcgtgaattgaaaccaaaagagaaaccagttggtccaccgttgaacctggtggttccacttaagcagccgccagctcaaccggacagaatgaatgtgatcaaggtatcaaacattatggggattgacccgaagccttttgatcctaaaacatatgtggaggaggatgtatttgttacagatgaatctgggactaaaaaaaggatacgactggaggacaatattgtgcggtggagaaccgttaagaatgctaatggcactacatcttgtgaaagtaatgcgcgcattgtaaaatggaaagatggaacgatgcagctgctgattggtaatgaagttcttgatatatctgtacatgaagcacatcatgatcagtcccatctgtttctgaggaatgggaagggagtccttcaatcacaaggaaggctcttacggaaaatgagattcatgccatcttccttgtcttcgaaatcacatcgtttattaactgctcttgttgattctcagaataagaaaactgttaagatgcaaaaatggatcgaatctaaggatcctgagaaagtgaagcaggaaaaagaaagggccttgggccaaaatattcgagcccattcaattcttcaacgc</cdnaseq>

Protein Sequence

<aaseq>MAGGDRERDVEEETRNQMMQNLFGDQSEDEEDDDEAVEVVDEDD HPHPQQQQLLRHQVVDDDDDEDDVRSEGHARSGYHSEEVEGEADNGGEGEAEGEGESE GQVGMEEESEAEAHQADLDQGESDGEKVQSSPEREFSDRVMQNDAAGMDSEDGGYQQW PVASGRRGVVASESEGSEDDYYAGRGHEDEEPHQTRKTPSSPVEEERDHEVVRDVFGE SDEDGPAPYRDQHEIDEDSHRSPMEDEGHYEKDLQPEDVVADEDMRYESDENRELKPK EKPVGPPLNLVVPLKQPPAQPDRMNVIKVSNIMGIDPKPFDPKTYVEEDVFVTDESGT KKRIRLEDNIVRWRTVKNANGTTSCESNARIVKWKDGTMQLLIGNEVLDISVHEAHHD QSHLFLRNGKGVLQSQGRLLRKMRFMPSSLSSKSHRLLTALVDSQNKKTVKMQKWIES KDPEKVKQEKERALGQNIRAHSILQR</aaseq>

Gene Sequence

<dnaseqindica>5592..5633#4074..4253#3832..3963#3284..3460#2621..2803#2033..2147#1211..1569#400..639#atccaccactcttcccggcgagcatctcgctctcgctgccggcacggctcgcgactcgtcgccgccgccgcccgacgcggggcgccccaaaggccgcacggccgccgctccgtccagcgccgcggcgtggcgcgggcggtagtacgacgacgcgctcatcccgggagcggcagcggtggcgaacctccttgcggcagcgcgtcctgtcgtcgtcgcgccgagctccggcctcctactcggccagcggccggcggcggcggctacggctacggaggaggagaaggagagcgagcgaggcgccccattttttcggcttccatcggccgcacttttgacagcattttcgaaagaaatccccaattgaagaagaattggagaggagaggcggcggcggcggcgatggctggcggcgacagggagagggatgtcgaggaggagacgaggaaccagatgatgcagaacctcttcggcgaccagtcggaggacgaagaggatgacgacgaggccgtcgaggtcgtcgacgaggacgaccacccgcatccgcagcagcagcagctgcttcgccaccaggtggtggacgacgacgacgacgaagacgacgtccgtagcgaaggccatgcccgctccggctaccactcggtaaaaatctcaaatctcccctcccctgcttcctgtccccccgtcctggggctagggcttaggtttgttcggctggaataaatctcgccattgggatactgcagtttgatgaaccagtacatttctgcttcgctgatccccaatcatctgttcgaaaattctgaaaggaacatcttgataataagctttgctagtagaatattgtacttttttggaccaaaactattgtaattttaggtgacgtgatatggagcattgcctcttgaacaccactggcatttcagaattccatcattttgtttcctcacactttgcgcgcaagtctgtcagtctcaagtgtaaatcctctgtgtgtaatgctagtttttttcagtgcccagctgtagcaagtgatttggagacatactggacctatcacggtgtaaaaatcgaaccgtcattccttgctgatcttgccacagagtttagctctcgtaggctcttcttgtgccccagttcttcattgatgcattctgtatacttccgctgcagctatctgatgtgatgcttgcttattgatttgcttgtacaggaagaagtggaaggtgaggctgataatggaggggaaggtgaagcggaaggagaaggtgaaagtgaggggcaagttgggatggaagaagaaagcgaagctgaagctcatcaagctgatcttgatcaaggagaaagtgatggggaaaaggtccagagctccccagaaagagaatttagtgaccgggtgatgcaaaatgatgcagcaggcatggatagtgaagacggaggctatcagcagtggccagtagctagcggaagaagaggagttgttgcctctgaatctgaagggtctgaagatgactattatgctggccgaggtcatgaagatgaggaacctcatcaaacaaggaaaacaccaaggttaagggaaaacaatcagaatcctatctattgtccgtgcattatatgctttctagatctgacattacgacgtactccctccgtacttgtaaaggaagtcgtttaggacaccgacacggtctccaaaacacaactttgacttatttctataaaaatatttattaaaaagtggtatatgtatacttttatgaaagtatttttcaagacaaatttattcatataatttttacatttttaaactcaacaacttgagagttattcaggatttatattcccaaggtttgacttaaacattgttctaaacgacttcctttacgagtacggagggagtaacaatctatccacttcttcattaactgtttcttagtattttgctagtgactcaatatgcactctttgcctatgtatatcctccctacctttgtagtaagtagtaactcgtaagaaccataatcttatgcagctcgccagttgaggaggagagagatcatgaagttgtccgtgatgtatttggtgaaagcgatgaagatggacctgctccatatcgtgatcaacatgaaattgatgaagattcccatgtgagatttttatgctcaagttacctaccattctaggcttaaagtaggaatatctttcgtcgggcttaaagaaaaccagcaaagattttcacggaaattctaaacagagccatttttttatacattctgcactgagcaagtacagtatgctaacgatgacttggtggcatgttgtttaaactgaatatcagcaaaagtattcatgtaattcaatatgtagagaattttgtgttttatcttcttttaaattcagagttaccatatgatgcttaactatgtaacaaatttactaatgcaggtagcatctttgctaattatgtatttatctaaaaatctaatctttctccctattcatttcttgtatgtaccctgcatgaatatagatctgtgctccagtcagtattgatcaactttcacacctaacttttttctggatgcaataggtactcaaaatttcctcctttcttttttagagatcacctatggaagatgaaggtcactatgagaaggatttgcagcctgaggatgtagtagctgatgaagatatgagatatgaatcagatgaaaatcgtgaattgaaaccaaaagagaaaccagttggtccaccgttgaacctggtggttccacttaagcagccgccagctcaaccggacagagtgagttgactacccctttcgaaccatatatctttcagtctttgaccatacagcactgttatcttttctgacaagatgattatatattggcagacatcagttatctttgatggatatttattgcgttgctgtatatacaccagatttttatttgtcattctttgtatctgttactgtttaattgctgatattttgtgcttgttcgtaaatgttgttgtgcagaactgcacaattgactggtgcagtacaatgtcagaaataaagaacctgtgctgctatgaactccatgcttgtacttattatgtgacgttggccctttagtagttgaaatttcttttttatgtcatggtattattgaagagaactttgctgtcatgttataggcttgactaggaatattaatgattggtgcttaaatattttgtgcttttgcagctattcatagatttttttgttactgactgatttcttaacttgtagatgaatgtgatcaaggtatcaaacattatggggattgacccgaagccttttgatcctaaaacatatgtggaggaggatgtatttgttacagatgaatctgggactaaaaaaaggatacgactggaggacaatattgtgcggtggagaaccgttaagaatgctaatggcactacatctgtaagtggaatgtttttcaagtagcattttgaaatcctttagcattacagactcagttatgctatgtcgccatcttctaagtttccctccctgaagatgctctgggcagcttcttaactttcttacaataatcagggttgtgaactagcctttagtgatgcttgcaccgagtcttctctcatagccaacttgcccaactgttattatgtattccctgcaaaagaatatatatgttattatacataccataagatgcttggtctgtttcattttcttcctccttttttttggtcattgcccttttaagtagtttgtgacaggtggtcggtgcactatgtggctatgcatatgataaatgagcattgttgcagtgtgaaagtaatgcgcgcattgtaaaatggaaagatggaacgatgcagctgctgattggtaatgaagttcttgatatatctgtacatgaagcacatcatgatcagtcccatctgtttctgaggaatgggaaggtaaagtacttcttatctgcaattcaacaatgttcgctaccacctctgttcattcatgctcttaccgcataggtctcactaacctgatataattttgaattgtaatgcagggagtccttcaatcacaaggaaggctcttacggaaaatgagattcatgccatcttccttgtcttcgaaatcacatcgtttattaactgctcttgttgattctcagaataagaaaactgttaagatgcaaaaatggatcgaatctaaggatcctgagaaagtgaagcaggaaaaagaaagggtaaccaaaaactccatttcttaattcattggatgtatatgcaacactgaatgacatgtgtatgacttacttttgtcccaatgctgcttctgatatggttcctatgtcaaaaacaacatgatttgtgttgtgttatactcactttccatttttttctataggggatagccattgggcttgacgtaacatgaacatttatattttttcccttatttctttagattataggagttggatgcatgtaatacttaatagagtagaataatcagcaagatagtcagaatgcaaacttcaaattaagtaaatataatttggtatctgaccatgagagatttgagcagatactgaatttgtaccagataactgacaaacaagtgaatatgagcataactggtaagctagtaccattaaggaaatgctactaaagtactaactaatgttgcaagctacaataatggtcttcttcatggaaatatgagcttcaaatttgattattcttgggcgcatagctagtcaggatcactatataaaataattgagaggacagttgatgcttttagagcaggataatcagcaagcaaatttagagcatgacaatcagcaagcaaattgtttttcttggatcacaaacatgtgataacatttttagctatagttggtaaattgacgattctccagtgtctaaaaacattacatgcaaatcttggcatgttgattgtaaatctcttgaatggtaaagagcaagattttcatcatatttatcctaaaaataaagatgtaatcattatgaaatcatttgaatgagttccacaatcttgttgctttctctgttttttttcttccttttatgatgagaggatgagttctaagatgtaagaaatttatgtcgtcattccaacaaatatcaatgtgatatcaggtcccattttccaacaatactgcaatttgtattcagcaaattctcttgtttgtgtgttttcatgtttttctccaatgcataagcaagcattaattagctcaatttctgtggcagttcaacacgcgttctagatcctgtgagtttcagctttgatttgagagtctaaaagttattgtaacatgatttgttcttactgctacgctgcatagcatttattgtggcttgctccagtgaacttttcacaaaaagtaaatcacatagggttaagtttccttttgtgaaggcgcaataaccaaatagttgacatgccgatttagtaaatgcatttaatcctgttccatgctttgctgtatttcctttctgttctaaacttgttatatatgcattttgaatgaagtttgtcccttttcaatatgcaggccttgggccaaaatattcgagcccattcaattcttcaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0109600, RefSeq:Os07g0109600