Os09g0448100

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0448100| Description = Cyclin-like F-box domain containing protein| Version = NM_001069851.1 GI:115479444 GeneID:4347210| Length = 3038 bp|...")
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Gene Name

Os09g0448100

Description

Cyclin-like F-box domain containing protein

Version

NM_001069851.1 GI:115479444 GeneID:4347210

Length

3038 bp

Definition

Oryza sativa Japonica Group Os09g0448100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17401958..17404995

Sequence Coding Region

17403077..17404284,17404711..17404801

Expression

GEO Profiles:Os09g0448100

Genome Context

<gbrowseImage1> name=NC_008402:17401958..17404995 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17401958..17404995 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcggagttacgagagggcgctccctgccgtcgcgaaccaccatcgccggcgcgggcggcgccgaagggggccgcggccaagacggcggccgatcagcttgagagattgttgtcatggcagcgaaacaatctggtgactactcggccgcgaaaggtgatgcgcattgttatcaactcttggtcgaggttcatgccccattacatccctgatgatgtgatgttcaacatcctgtcatggctgccatccaagtctctcatccgatttaagtctgtgtgcaaggcttggcatgccatgatatccagcccgtgtttcactgatgctcaccttgagtgttccaagagaaacccatcgatactcatggtccctggtgcttatgagaagcaggaggacggtgagaatatcgccttcatgatggtcctctataagtaccatggaggtaaaacaatggaactggtccatatgcagaactttccgctaggcattggtgtatggactcgccctgtgcactgtaatggtttactcctcattcccaccatgaacctcgaaatgatgatctgtaacccttcaacaagacagattgttttcctaccaaaagtcagtggcaacatttgcacaggcacaagggctggatttgggtttgatcctcacagcaacaaatacaaggtggctagatctttctatcaaagggatagtgaaacacaagaattagtctgcaagtttgaagtgcttactctgggcactaatgcatggaggcaaactgaagatccaccatatccaattgatgctttaactccagtccatgtgaaaggcgccatctactggatagtgtgtagttcactttgcccagatccacctaatgcattcctccgattctgtttgactgatgagaagttcagtttgtttccgtgtcctccatccaatgtaaagtctgtccgtttcacagaggtggagggtgaactgtgttgtgcttgctttttcagtgagacgctagcgctggagatttggaactgcagtggtgggcagaaccttgaatggactcgacgctatgttatacagattccacctgatgttgttatgaagtaccctgtagaaagaccccctttaattgtttttcgtgaaaaaatgttgctgctggcattcaaaaaggtctacaggtatgatatcgaaacctgtagaatagtagaattagcttcaaaggtttcagacttcacctgctatgaaccatatttggagaaggaagcaagggatttgcatctatttaattatgctgagagtctagttccaattagagaattttga</cdnaseq>

Protein Sequence

<aaseq>AELREGAPCRREPPSPARAAPKGAAAKTAADQLERLLSWQRNNL VTTRPRKVMRIVINSWSRFMPHYIPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSP CFTDAHLECSKRNPSILMVPGAYEKQEDGENIAFMMVLYKYHGGKTMELVHMQNFPLG IGVWTRPVHCNGLLLIPTMNLEMMICNPSTRQIVFLPKVSGNICTGTRAGFGFDPHSN KYKVARSFYQRDSETQELVCKFEVLTLGTNAWRQTEDPPYPIDALTPVHVKGAIYWIV CSSLCPDPPNAFLRFCLTDEKFSLFPCPPSNVKSVRFTEVEGELCCACFFSETLALEI WNCSGGQNLEWTRRYVIQIPPDVVMKYPVERPPLIVFREKMLLLAFKKVYRYDIETCR IVELASKVSDFTCYEPYLEKEARDLHLFNYAESLVPIREF</aaseq>

Gene Sequence

<dnaseqindica>712..1919#195..285#gagggaccttcggtgtaccttttcctttctcctcctcgagaatccccaaatctcgctcgctattcacgcgaccacgcaaaccgaccttcctccgtcgctcggccagcggccggcgccggcgcgcggggtccacctgaggcggccatccccttcccaggctctcaagccaggaatccgctcgccgtgcgacttaggcggagttacgagagggcgctccctgccgtcgcgaaccaccatcgccggcgcgggcggcgccgaagggggccgcggccaagacggcggccggtgagttctctaatagcagataaagtttatctgcaccgttctagttcataagtttttgttaatttcatgtttgcctcagcaagattcagtttttctcccttggtaacagttgctagctttttctgtattgtcctagttcctctgcagctttacttgaccgaaagagataaagataaaaggtttattttgtgaattgtgaagaaaccgccgctgcctggcaactccgaacaggatttagaatcgggttgaggaattactagtcccaatcggatcgaagttcggatgcctagctcgatttgcatggccaatacttcctttataagtggggaaaagctctcccctcggtgaccagactatatatatatatatttaataactcctttttaagtgcaaagtcataacctatctcctcgtcatcttctgcagatcagcttgagagattgttgtcatggcagcgaaacaatctggtgactactcggccgcgaaaggtgatgcgcattgttatcaactcttggtcgaggttcatgccccattacatccctgatgatgtgatgttcaacatcctgtcatggctgccatccaagtctctcatccgatttaagtctgtgtgcaaggcttggcatgccatgatatccagcccgtgtttcactgatgctcaccttgagtgttccaagagaaacccatcgatactcatggtccctggtgcttatgagaagcaggaggacggtgagaatatcgccttcatgatggtcctctataagtaccatggaggtaaaacaatggaactggtccatatgcagaactttccgctaggcattggtgtatggactcgccctgtgcactgtaatggtttactcctcattcccaccatgaacctcgaaatgatgatctgtaacccttcaacaagacagattgttttcctaccaaaagtcagtggcaacatttgcacaggcacaagggctggatttgggtttgatcctcacagcaacaaatacaaggtggctagatctttctatcaaagggatagtgaaacacaagaattagtctgcaagtttgaagtgcttactctgggcactaatgcatggaggcaaactgaagatccaccatatccaattgatgctttaactccagtccatgtgaaaggcgccatctactggatagtgtgtagttcactttgcccagatccacctaatgcattcctccgattctgtttgactgatgagaagttcagtttgtttccgtgtcctccatccaatgtaaagtctgtccgtttcacagaggtggagggtgaactgtgttgtgcttgctttttcagtgagacgctagcgctggagatttggaactgcagtggtgggcagaaccttgaatggactcgacgctatgttatacagattccacctgatgttgttatgaagtaccctgtagaaagaccccctttaattgtttttcgtgaaaaaatgttgctgctggcattcaaaaaggtctacaggtatgatatcgaaacctgtagaatagtagaattagcttcaaaggtttcagacttcacctgctatgaaccatatttggagaaggaagcaagggatttgcatctatttaattatgctgagagtctagttccaattagagaattttgagaagttacttctgtctgttagtgtgagcttctccacaacttgtaatgatccaaggtagggagaagtttgttttttttggttgcaagtgtcagccaaggttcattttcattgaattcatctgtgctactattttactgtaacaatcaatttttctttctagcggtattgaccatgaaacgcaataagtatcatgtgaattgtcctcagttatgttgctcagaataactcctatgcattttgccacttacatatgtgatatgttcttttcttgttttaattaacattttatattagcaaatatattcttactaatgccatattttcattgttgtttattaatatgttctatcatctgaggagatcatcaaaaaataatctggtccatctgaaactagtactcccaacagagctagtgctttttaagagggagaagaaagcgggctacagatatgtgattcagcgctgcaagtgaatgatcccaatctttgctcttgcaccattgctcaaacttgtgccatgttttttttatcaaggagtttcaatcggtcagtcacttgtgattctttttacagattacatttgttgcacttgctgaagattaaggtatctgttgttgcttgctggttctcgtgctattgttctctactgtttttgctgaattcttcagctggtgctgctgttgatgtgctgttgtcgaggccacgatcaggagttcgtgaccgtgatttcgcagagggagagacggaaataaaattcagttggtggtttcgtagagggcccacttttaattttagaaagtcaattttagacaatctcctggagggatcaatattttagcacatcaaattttgtttagcattcccataaaaatagttttgggaatgaaatattgggatactcttggtgatcttggtgatgctctaattcccacggcagccagcctaaacgtcgccgtgcagtgtgcggacgcggcctgtgccacctccgtaccatgcgtatccaattctcggtttattcgggaaaaccgaacaagaaagctgaacactttcatatactatggatgtgtttagttctttggtgtaaagtttttgaagtatacggacacatatttttgggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0448100, RefSeq:Os09g0448100