Os07g0114000

From RiceWiki
Revision as of 08:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0114000| Description = Similar to Protein phosphatase 2C-like| Version = NM_001065285.1 GI:115470302 GeneID:4342246| Length = 1567 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0114000

Description

Similar to Protein phosphatase 2C-like

Version

NM_001065285.1 GI:115470302 GeneID:4342246

Length

1567 bp

Definition

Oryza sativa Japonica Group Os07g0114000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:779384..780950

Sequence Coding Region

779554..780434,780542..780794

Expression

GEO Profiles:Os07g0114000

Genome Context

<gbrowseImage1> name=NC_008400:779384..780950 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:779384..780950 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcgaggtggtgcgtggggtggccggcggcggcgaggggtggtcgggatgagctgacgtggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggccaacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggcgccacgctcgtcggcgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcccgcctattccctctcatccatgagttcgcggcggagcgcggcggcgcggtggacgccgacgtgatccggaaggcgttcctggcggccgacgaggagtacctccagctgctgcggtggtcgctgccgaacatgtcccgcgcggccgcctcgggctcctgctgcctcctgggcgccatctccggcgacacgctctacgtcgccaacgccggcgactcccgcgctgtcctcggccgccgcgcggcggccggccagaccgtcgccgagcggctctccaccgagcacaacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcgaggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtggcgcgcgccatcggcgacgtgtacctcaagacgccggagttcaagcgcgacccggcggtgcagcggctatgcagcgccgccgccgccgtcgagctggcgcggccggtggtcaccgccgagccgtccatccacgcccggaagctcaaggcgggcgtcgacctgttcgtcgtgttcgcctccgacggcctatgggagcacctctccgacgaggcggcggtgcagctggtgtccaagagctcgacgaggagaggcgtggcggcgaggctggtgcaggcagcgctcggggaggcggcgaggaagcgggaggtgaggcgcggcgacctgcggcggatcgagcgaggggtgaggcgccacttccacgacgacatcaccgccgtcgtcgtcttcctcgacctcgacgacgacggcggccgccgcgcgcgccgccgtggcagggtcgtcgactccagcagcagcagctgcagcaacacgccgctcgacgtctacagcttgtacaactccaccgcttga</cdnaseq>

Protein Sequence

<aaseq>MMARWCVGWPAAARGGRDELTWQAELTAHAAGEFSMAAAQANAV MEDQAQVMASPGATLVGVYDGHGGPDASRFLRSRLFPLIHEFAAERGGAVDADVIRKA FLAADEEYLQLLRWSLPNMSRAAASGSCCLLGAISGDTLYVANAGDSRAVLGRRAAAG QTVAERLSTEHNVASEEVRRELAALHPDDGEVVVHARGAWRVKGIIQVARAIGDVYLK TPEFKRDPAVQRLCSAAAAVELARPVVTAEPSIHARKLKAGVDLFVVFASDGLWEHLS DEAAVQLVSKSSTRRGVAARLVQAALGEAARKREVRRGDLRRIERGVRRHFHDDITAV VVFLDLDDDGGRRARRRGRVVDSSSSSCSNTPLDVYSLYNSTA</aaseq>

Gene Sequence

<dnaseqindica>517..1397#157..409#acgtcgcctcgccggagaagaagacatcgccaacatataccccccctccctacctagactcagatcagatcacctgcccatcgacgagcacaagagcgatccattcctggtttgaatcgagcttggtttgtttggttggttggtttcttggagtggatgatggcgaggtggtgcgtggggtggccggcggcggcgaggggtggtcgggatgagctgacgtggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggccaacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggcgccacgctcgtcggcgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcccgcctattccctctcatccatggtgcgtgcgctcgccggcgcgcggcggagctcgatcttgtggtttgatttgaatacgttggcaagaatctttagctgattttgttggcgccaaaaattgatgagcagagttcgcggcggagcgcggcggcgcggtggacgccgacgtgatccggaaggcgttcctggcggccgacgaggagtacctccagctgctgcggtggtcgctgccgaacatgtcccgcgcggccgcctcgggctcctgctgcctcctgggcgccatctccggcgacacgctctacgtcgccaacgccggcgactcccgcgctgtcctcggccgccgcgcggcggccggccagaccgtcgccgagcggctctccaccgagcacaacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcgaggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtggcgcgcgccatcggcgacgtgtacctcaagacgccggagttcaagcgcgacccggcggtgcagcggctatgcagcgccgccgccgccgtcgagctggcgcggccggtggtcaccgccgagccgtccatccacgcccggaagctcaaggcgggcgtcgacctgttcgtcgtgttcgcctccgacggcctatgggagcacctctccgacgaggcggcggtgcagctggtgtccaagagctcgacgaggagaggcgtggcggcgaggctggtgcaggcagcgctcggggaggcggcgaggaagcgggaggtgaggcgcggcgacctgcggcggatcgagcgaggggtgaggcgccacttccacgacgacatcaccgccgtcgtcgtcttcctcgacctcgacgacgacggcggccgccgcgcgcgccgccgtggcagggtcgtcgactccagcagcagcagctgcagcaacacgccgctcgacgtctacagcttgtacaactccaccgcttgaacaacaatatatttaatatttgggatttcccatgtcatgttgcttacaactacattttttttaaacatttttacaaataggatgtcgagttaggttaacacttaggatctgtttgtcatagtttaactctatcttttttgaagttggagttcagactaacagttttaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0114000, RefSeq:Os07g0114000