BGIOSGA005731

From RiceWiki
Revision as of 18:36, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA005731

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005731, complete gene.

LocusTag

OsI_08695

Ensembl Transcript ID

BGIOSGA005731-TA

Ensembl Protein ID

BGIOSGA005731-PA

Length

3065

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31655845..31658909

Sequence Coding Region

31658783..31658909,31657900..31658117,31657223..31657782,31656428..31656695,31655845..31656354

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31655845..31658909 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31655845..31658909 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCAACTGCTGTCGATTCGAAAAGGATTTCTGACATCACTGAAGATGGATCAATGGACAGGCGAGGAAATCCGGCAGTTAAAGCAAAAACTGGGAATTGGAGATCTTCCATCCTCTTGCTAGTCAACTATGGGCTCGTGACATGCGCCTTCTTCGGCGTCGGGGTGAACCTTGTGGTGTTCCTGCGGCGGGTGCTCCACCAGGACAACGCAGAGGCAGCCAACAGCATCAGCAAGTGGACCGGCACGGTCTACATCTTCTCCCTCATCGGCGCCTTCATGAGCGACTCCTATTGGGGCCGATACATCACGTGTGCAATCTTCCAGATGATCTATGTCACGGGCCTGGTGATACTGTCACTCGCGTCGTGGTTCTTGCTGGTGAAGCCCACCGGCTGCGGCGCCGCGGGGGAGCACTGCGACGCGCCGTCGAGCGCCGGCGTCGCGCTCTTCTACCTGTCGACCTACATGATCGCGTTCGGCAACGGAGGGTACCAGCCGTCCATCGCCACGTTCGGCTCCGACCAGTTCGACGAGACGGACCCCAGGGAGGCCCGCTCCAAGGTGGCCTTCTTCAGCTACTTCTACCTGGCGCTCAACGTGGGCTCCCTCTTCTCCAACACGGTGCTGGTGTACTACGAGGACGAGGGGAGGTGGGTCATGGGGTTCTGGGTCTCGGCCGCGGCGGCGGCCATGGCGCTCGTGCTCTTCTTGCTCGGCACCCCCAACTACCGCCACTTCAAGCCGACCGGCAACCCGTTGACCCGCATCGCGCAGGTGTTCGTCGCCGCGTTCCGCAAGTGGCGCGCCGAGGTGCCACGCAGCGAGCTCCTGCACGAGGTTGACGGCGACGAGTCCCAGATTGCTGGCATCCGAAAGATCCTCCACAGCGACCAGATCAGGTTCCTTGACAAGGCGGCGACGGTCACCGAGGAGGACTACTGCACGCCGGAGAACATGCAGGATCCGTGGAGGCTGTGCACGGTGACCCAGGTGGAGGAAGTGAAGTGCATCCTGAAGATGCTGCCCATCTGGCTGTGCACGATCGTATACTCGGTGGTGTTCACCCAGATGGCGTCGCTGTTCGTGGAGCAGGGAACCACCATGAACACCAACATCGGGTCGTTCCACGTGCCCGCGGCGAGCATGTCGGTGTTCGACATCCTCAGCGGGCTGACCGAGCTGCAGCGGATGGGCGTGGGGCTCGTGGTCGGCATGGCGGCCATGGTGGTCGCCGGCGTGGTGGAGGTGGAGCGGCTGAAGCGGGTGGGCGCGCCGGACCAGCCGAGCTCCCTGAGCGTGCTGTGGCAGGTGCCGCAGTACGCGCTGATCGGGGCGTCGGAGGTGTTCATGTACGTGGGGCAGCTGGAGTTCTTCAACGGGCAGGCCCCCGACGGCGTGAAGAGCTTCGGGAGCTCGCTGTGCATGGCGTCCATCTCGCTGGGGAACTACGTGAGCATCATGCTGGTGAGCGTGGTCACCAGCCTCACCGCCGGCGACAGGCGGCCCGGGTGGATCCCCGGGAACCTCAACTCCGGCCACCTCGACAGGTTCTACTTCCTCCTCGCCGCGCTCTCGCTGGTCGACCTCGCCGTGTACGTCGCGTGCGCCGTATGGTACAAGGGCATCAAGCTCGACAGCAACGAGGAGAAGGCGAACAAGATCACCGTGCACGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MAPTAVDSKRISDITEDGSMDRRGNPAVKAKTGNWRSSILLLVNYGLVTCAFFGVGVNLVVFLRRVLHQDNAEAANSISKWTGTVYIFSLIGAFMSDSYWGRYITCAIFQMIYVTGLVILSLASWFLLVKPTGCGAAGEHCDAPSSAGVALFYLSTYMIAFGNGGYQPSIATFGSDQFDETDPREARSKVAFFSYFYLALNVGSLFSNTVLVYYEDEGRWVMGFWVSAAAAAMALVLFLLGTPNYRHFKPTGNPLTRIAQVFVAAFRKWRAEVPRSELLHEVDGDESQIAGIRKILHSDQIRFLDKAATVTEEDYCTPENMQDPWRLCTVTQVEEVKCILKMLPIWLCTIVYSVVFTQMASLFVEQGTTMNTNIGSFHVPAASMSVFDILSGLTELQRMGVGLVVGMAAMVVAGVVEVERLKRVGAPDQPSSLSVLWQVPQYALIGASEVFMYVGQLEFFNGQAPDGVKSFGSSLCMASISLGNYVSIMLVSVVTSLTAGDRRPGWIPGNLNSGHLDRFYFLLAALSLVDLAVYVACAVWYKGIKLDSNEEKANKITVHV</aaseq>

Gene Sequence

<dnaseqindica>1..127#793..1010#1128..1687#2215..2482#2556..3065#ATGGCTCCAACTGCTGTCGATTCGAAAAGGATTTCTGACATCACTGAAGATGGATCAATGGACAGGCGAGGAAATCCGGCAGTTAAAGCAAAAACTGGGAATTGGAGATCTTCCATCCTCTTGCTAGGTAAAGCTATGTTTTACTTTAATTCTGTTATTCATATATCTACAAATTAACTGTTTTAATAAGATTGGTTTCTTGTTTATTGAAAAACTGCTTTTCTTGGATTCCCAACATGACAACGTTGGTTGTTGATTAGATTAGGTTATGTTTCAGTCTTCAAAGAACTATGAACTAATATTGTCAGCACATAGTGTGATCACAACCTTATAGCTTGTTATTTGCTAGTAAATTCCTACTTCGCTGTCTGAGTTGTATGCTGTTCAGACTTCAGATTTCCACCAACTGGAACCTTCAAGAATAATCCTTCTTGCAGAGCTTCTAGCCAGTTGAGTGGCAGCCAAACCTGGAGGTTGATCCACCGTTGGAAAGCTATCAATTCTGTACTCTTCAGGTTTAACACTACGCGTTTTGCTCTTCATCCAGATTTACTCTGCATGGGCAATAACCAACCTGACTAAAACCTTACTTCAGAAGACCGATTGTTGTGAACTGTGTTAAACCTTTGTGTTCGTATTCCCGAAAAAAAAAAAAGTTCAACCTTGTGTTGCATTAGGACACTTCCAAAGCCATGTGCAGAATCTACCCAATCTTGTTTTTCAATATATAAGCTGTTACAAGTTGGATTTGGGATCGATTGGACAGTTAATTCAGGTGTGTTCCTGATGCAGTCAACTATGGGCTCGTGACATGCGCCTTCTTCGGCGTCGGGGTGAACCTTGTGGTGTTCCTGCGGCGGGTGCTCCACCAGGACAACGCAGAGGCAGCCAACAGCATCAGCAAGTGGACCGGCACGGTCTACATCTTCTCCCTCATCGGCGCCTTCATGAGCGACTCCTATTGGGGCCGATACATCACGTGTGCAATCTTCCAGATGATCTATGTCACGGTACGATGGTCAAGTTAATTATATTATTATTATTTTTAATTAGCTCTTCTGTTGTTGGAATGATCTTGCTGAACTACGCGTCGTGTGTGTTGTTCTGAACTTTCTGCTGATGATCAGGGCCTGGTGATACTGTCACTCGCGTCGTGGTTCTTGCTGGTGAAGCCCACCGGCTGCGGCGCCGCGGGGGAGCACTGCGACGCGCCGTCGAGCGCCGGCGTCGCGCTCTTCTACCTGTCGACCTACATGATCGCGTTCGGCAACGGAGGGTACCAGCCGTCCATCGCCACGTTCGGCTCCGACCAGTTCGACGAGACGGACCCCAGGGAGGCCCGCTCCAAGGTGGCCTTCTTCAGCTACTTCTACCTGGCGCTCAACGTGGGCTCCCTCTTCTCCAACACGGTGCTGGTGTACTACGAGGACGAGGGGAGGTGGGTCATGGGGTTCTGGGTCTCGGCCGCGGCGGCGGCCATGGCGCTCGTGCTCTTCTTGCTCGGCACCCCCAACTACCGCCACTTCAAGCCGACCGGCAACCCGTTGACCCGCATCGCGCAGGTGTTCGTCGCCGCGTTCCGCAAGTGGCGCGCCGAGGTGCCACGCAGCGAGCTCCTGCACGAGGTTGACGGCGACGAGTCCCAGATTGCTGGCATCCGAAAGATCCTCCACAGCGACCAGATCAGGTGAATATCTTGTTTGAACGATGTGCCAATGCACTTTGATCGATTTGCCGTTTGACTCAGGCATCAAACAGTGTTGATTCGAGATAAATAATCGGGAGTGGATTCTAATCCCTCAAGGGATATCCCCTCGTATACCTTTTTCTTCTAAATTCGATGTAAATAGTTCTGAAAAATTCTAAAAATTTTTTTGACAATGTAGAGTATAATGATACCTACTAGTCCACCAAAATTCAAGTTCAAATTCGATCTACACATCGAGAAAAAAAAAAAGACAAATTTAGATATAAACAGTATGCTACTATTCATATGCTGAATTTGTCTTTTTTATATCTCGACGTGTGAGTTGAGTTTGGACATAAGATTTTGTGGAGATGTATATATGTGTTGTATGAATGTTATCAAATTTTTTCAGAATTTTTCATAACCGTTTAGATAATTTTTAAGCAAATGAGGGAACATCCACTCGAGAGATTAGAATAGTTTCCTATATAATCGATGTGCATTTGGTGGCGTGTTTTGGTGTTCAGGTTCCTTGACAAGGCGGCGACGGTCACCGAGGAGGACTACTGCACGCCGGAGAACATGCAGGATCCGTGGAGGCTGTGCACGGTGACCCAGGTGGAGGAAGTGAAGTGCATCCTGAAGATGCTGCCCATCTGGCTGTGCACGATCGTATACTCGGTGGTGTTCACCCAGATGGCGTCGCTGTTCGTGGAGCAGGGAACCACCATGAACACCAACATCGGGTCGTTCCACGTGCCCGCGGCGAGCATGTCGGTGTTCGACATCCTCAGCGTGCTGGCGTTCATCGCCATCTACCGGCGCGTGCTCGTGCCGGTCATGTCGCGCCTGTCCCGGCAACCCGCAGGGGCTGACCGAGCTGCAGCGGATGGGCGTGGGGCTCGTGGTCGGCATGGCGGCCATGGTGGTCGCCGGCGTGGTGGAGGTGGAGCGGCTGAAGCGGGTGGGCGCGCCGGACCAGCCGAGCTCCCTGAGCGTGCTGTGGCAGGTGCCGCAGTACGCGCTGATCGGGGCGTCGGAGGTGTTCATGTACGTGGGGCAGCTGGAGTTCTTCAACGGGCAGGCCCCCGACGGCGTGAAGAGCTTCGGGAGCTCGCTGTGCATGGCGTCCATCTCGCTGGGGAACTACGTGAGCATCATGCTGGTGAGCGTGGTCACCAGCCTCACCGCCGGCGACAGGCGGCCCGGGTGGATCCCCGGGAACCTCAACTCCGGCCACCTCGACAGGTTCTACTTCCTCCTCGCCGCGCTCTCGCTGGTCGACCTCGCCGTGTACGTCGCGTGCGCCGTATGGTACAAGGGCATCAAGCTCGACAGCAACGAGGAGAAGGCGAACAAGATCACCGTGCACGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005731