BGIOSGA005820

From RiceWiki
Revision as of 18:37, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA005820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005820, complete gene.

LocusTag

OJ1717_A09.42

Ensembl Transcript ID

BGIOSGA005820-TA

Ensembl Protein ID

BGIOSGA005820-PA

Length

474

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29958706..29959179

Sequence Coding Region

29958971..29959179,29958706..29958874

Genome Context

<gbrowseImage1> name=IndicaChromosome02:29958706..29959179 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:29958706..29959179 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATTACTTCTACTTCTCCGCCACCTTGGAGTTGGAGCCCGCTGGCAACCTCGAGTCAGTCTCACCGTCGCCGAGCCCCCGGCGCACGACGTCCCGCGACGTCGACGTCGCCGGCGAGCTCCGCGGGCGCCACCACCACTACCTCGACGCCTGCTTCCTTTGCGGGCGGATGCTTGCCGGGAACAAGGATATCTTCATGTACAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCAGGCAGCGCCAGATCGACGCCGACGACGCGTCGGAGATGATGAAGAAGAGGGCGAAGAAGCAGCCCGCCGCCGCGAGGGGAGAGCAGCAGCCGCAGCGGCGGCAGAGCCCGCACGGCATCCCGGTCTGGGCCCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MEDYFYFSATLELEPAGNLESVSPSPSPRRTTSRDVDVAGELRGRHHHYLDACFLCGRMLAGNKDIFMYRGDTPFCSEECRQRQIDADDASEMMKKRAKKQPAAARGEQQPQRRQSPHGIPVWAR</aaseq>

Gene Sequence

<dnaseqindica>1..209#306..474#ATGGAGGATTACTTCTACTTCTCCGCCACCTTGGAGTTGGAGCCCGCTGGCAACCTCGAGTCAGTCTCACCGTCGCCGAGCCCCCGGCGCACGACGTCCCGCGACGTCGACGTCGCCGGCGAGCTCCGCGGGCGCCACCACCACTACCTCGACGCCTGCTTCCTTTGCGGGCGGATGCTTGCCGGGAACAAGGATATCTTCATGTACAGGTGAGCGCCGCATGGAGTTTGTAGTGTACGTTGTAGCTTGCCGCACGCGCGTTCTGGTTTGTGACCGGTGGTTTTCTGCTTTGTGCGCGCGTGCAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCAGGCAGCGCCAGATCGACGCCGACGACGCGTCGGAGATGATGAAGAAGAGGGCGAAGAAGCAGCCCGCCGCCGCGAGGGGAGAGCAGCAGCCGCAGCGGCGGCAGAGCCCGCACGGCATCCCGGTCTGGGCCCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005820