Os07g0120500

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Revision as of 08:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0120500| Description = Protein of unknown function DUF538 family protein| Version = NM_001188097.1 GI:297725324 GeneID:9267204| Length = 50...")
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Gene Name

Os07g0120500

Description

Protein of unknown function DUF538 family protein

Version

NM_001188097.1 GI:297725324 GeneID:9267204

Length

5091 bp

Definition

Oryza sativa Japonica Group Os07g0120500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1088664..1093754

Sequence Coding Region

1088664..1089190,1090376..1090455,1090875..1090932,1092710..1092844,1093004..1093754

Expression

GEO Profiles:Os07g0120500

Genome Context

<gbrowseImage1> name=NC_008400:1088664..1093754 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1088664..1093754 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggcgccggagttgatcgacgacatcgccgccgagatcctcctccgcatcccgccggatgaacccgcgcacctcgtccacgcctccctcgtctgcaagccctggcgtcgcatcctcaccgaccccgccttcctccgccgctaccgcgcattccaccgaacacctcccgtgctcggcttcctccacaacgttgacggcaacaaggcgatctcctccgtcccccgcttcgtccccactaccgccgcgtcgccattctccccaccggccatcgatccccccaactggtggtgggcgctcgactgccgccacggccgggtcctctcccacctcttcaatcccatggaactcatggtctgggaccccatcaccggcgaccagcatcgctttcctctgcccccgcacccgcacgcctactgcactggcgccgtgctatgcgctgcaagcgactgccaccatctggactgtcaccaaggccccttcctcgtcgtcttcgtgggcacaggaaggcatgatcactcatgggcgtgtgtatactcgtcgaagactggagagtggagctcgcaggcctccattgtgctcgattcctatgttgagatgttgcccagcgtcctcgccgaaaacacactctacttctactgtgagtatggcacgaaaattctgggatatgacattggcaagcatgagctttcagagatcgacccaccattggggcatgatggtggcatcctcatagaatcagaatatgaaggcacagatataattttcatgttgacagatgttgacttgtttgcaattgagctcaaatcaggccaagtgaagaaggttggtgagagcaggccctactatgccgtcattccctacatgagcttctacacttcagtgcttgctgcaaggcatgcagtgttcactggcatctctaaaggaactgagggcatgaggctggcagtcaagaggatcaaggcatggaagagtaagcggcttgacccacgcaatgaattctttgatgttacatcagttgaaccccacatctcatcttccatcacaacaatctcacaacccatttgcacacaacccaaatttcaaactaaaacttcttcacctgaaactacatacccaatggcatctcaaattgagagccaccgtgccagcgcggagatcgtcaatggagatgccatctgcaggaagaagtccattgagctgctggaagaacttggcctccccaagggcctcctgccattggaggacatcgaggagttcggctacaacagggacactggattcatgtggatggtgcagaggaagaagaagatcgagcacaccttcaagaagatcaagcagaccgtttcctacgccggcgaggtcacggcgttcgtcgagaaggggaagctgaagaagatcaccggcgtgaagaccaaggagctgctgctctggctcagcgtcgtcgaggtgtacgtcgccgaggcctcgccggagaaggtcaccttcaagactggaaccgggctctctgataacttcgatgccactgcttttgctctcggggagtag</cdnaseq>

Protein Sequence

<aaseq>MASAPELIDDIAAEILLRIPPDEPAHLVHASLVCKPWRRILTDP AFLRRYRAFHRTPPVLGFLHNVDGNKAISSVPRFVPTTAASPFSPPAIDPPNWWWALD CRHGRVLSHLFNPMELMVWDPITGDQHRFPLPPHPHAYCTGAVLCAASDCHHLDCHQG PFLVVFVGTGRHDHSWACVYSSKTGEWSSQASIVLDSYVEMLPSVLAENTLYFYCEYG TKILGYDIGKHELSEIDPPLGHDGGILIESEYEGTDIIFMLTDVDLFAIELKSGQVKK VGESRPYYAVIPYMSFYTSVLAARHAVFTGISKGTEGMRLAVKRIKAWKSKRLDPRNE FFDVTSVEPHISSSITTISQPICTQPKFQTKTSSPETTYPMASQIESHRASAEIVNGD AICRKKSIELLEELGLPKGLLPLEDIEEFGYNRDTGFMWMVQRKKKIEHTFKKIKQTV SYAGEVTAFVEKGKLKKITGVKTKELLLWLSVVEVYVAEASPEKVTFKTGTGLSDNFD ATAFALGE</aaseq>

Gene Sequence

<dnaseqindica>4565..5091#3300..3379#2823..2880#911..1045#1..751#atggcgtcggcgccggagttgatcgacgacatcgccgccgagatcctcctccgcatcccgccggatgaacccgcgcacctcgtccacgcctccctcgtctgcaagccctggcgtcgcatcctcaccgaccccgccttcctccgccgctaccgcgcattccaccgaacacctcccgtgctcggcttcctccacaacgttgacggcaacaaggcgatctcctccgtcccccgcttcgtccccactaccgccgcgtcgccattctccccaccggccatcgatccccccaactggtggtgggcgctcgactgccgccacggccgggtcctctcccacctcttcaatcccatggaactcatggtctgggaccccatcaccggcgaccagcatcgctttcctctgcccccgcacccgcacgcctactgcactggcgccgtgctatgcgctgcaagcgactgccaccatctggactgtcaccaaggccccttcctcgtcgtcttcgtgggcacaggaaggcatgatcactcatgggcgtgtgtatactcgtcgaagactggagagtggagctcgcaggcctccattgtgctcgattcctatgttgagatgttgcccagcgtcctcgccgaaaacacactctacttctactgtgagtatggcacgaaaattctgggatatgacattggcaagcatgagctttcagagatcgacccaccattggggcatgatggtggcatcctcatagaatcagaatatggtgggctgtgatttgctactgtggaagcttgcggcctcgtactgtggtcgcagtatgtgtgttatgatggcattgaggaatgggaacaatccaggataattgagttggacatgctgatccctaacttcttttactcaggtggtctggttggtttcgcagaaggcacagatataattttcatgttgacagatgttgacttgtttgcaattgagctcaaatcaggccaagtgaagaaggttggtgagagcaggccctactatgccgtcattccctacatgagcttctacacttcaggtaatagcctagatcttgtacagcttgccttagttgaaatttcaaaaattcagactaggcattgtttgagttagtggcttaaaaagtatgggttaccacatatatgccctgtgcttcagaacagtgtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcaaaattcaatgtcacatatcacatagatctctgttgttcttacccaattttttgtttggttctagtacatgttacgaaatgttcctgaaattagctaaattgcctaggcatatcttgatgacttgatctattatacatttatacttccccaaaaagtattgcatgccttatttgggtgttcatgttgagctattatatatggttatgagttctattctttgcatatcttcagatcttgctaggaagaggttagcgcagccagctggaatgcagtgatccattcagaccgatccattgagctgcttctaccttacagagctagtcctttgaactttaagtcttctttttttcttttatcctttttggtggggagtggaagtaagaagaaagtatgtgatcgtgcgcaatgaaaatgtttgatttcagtttgtaatgcaagtgagaaaggatgactcacgcaacttgtttcttctcgtttaactgcttattatcgttacccaggatctatctttcaggtttacatttcttcttatttgagacaatactcaatccatgactgggaagccctcttggaactgatatattgaatattccgtttttgcacgtgccctagtgagtagtgataaatttaagtggttgactctgtgtagtccagacttcgaaaccgggagatttgactacatttaaactgctgtaatagcttcagttaaatggagctgggatttttggccatgttattctaaaaaggatttgactgtatgactcatcattcaatgttcttaagtatagtaccaacaagcctgccatgaggaactccatgcctttagtttgtcatttgaagtaaaatacagcagattgaaagctgtcaatgttgtggttttgcacttgtcttttttttatctctttttgttcctgtagctttttctgaaaacaattgagtggaaataggcatatagcacattcacttgatgtttacttaatgctttaacaaactacatagttttttttttggtctcctgtagcctatcacaaaccatgtgcatcagtctcttgacgtattgattattcctaagccacagtgtggcgcactagcgtatatgaccatatgcaaatagggcacctgactccctgcatttttttaggctgaatttgggtaggtgtgtttgtttttttgacacagatttgggtaggtgttcgttttatttaaggatgaggtttatgaatttgcatacggtgtttgtaaattaacttgatgatgacaggtcacttgcagtccttttggtggcatggcagctttgttttcctccaagctcaaccttttgttgtgtgcaggatttctatatctgcctttgtgaattgtgatcataacttagttttgttgccttcctctggctcggattagttaaattaatattgagctagtaaacttaaactgatgaaccttactaaatggatgttccacaatatctatttcatctggcaatgaagttcattagtgcatgaaaaacttacctgtttgctataattatgctttgcctttgattctgatgctataattatgttttgctcttgatactgaccgaagtgcttgctgcaaggcatgcagtgttcactggcatctctaaaggaactgagggcatgaggtgggctgcaagagaaagttcctcacgacagaaggcaaagctaatgactcttaagctttaggaattcacaaggtgagtaaggatggggtgttgcagaacaattcattgtagtcaatccaatgcggatgctgtgttaaccctttaaattgtttttcacatcgctgaacacacaaaaaaaacttgaaataatatgtactcaagttgtttagtttgagcactacagtctatgtgattctttttttagctaaagctatgccagttattatcactagtagtagaatactatggggatcaacaatcttgtatgtctgaactctgaacatcatttcagattgaacacacatgcattatttatctcaatatgtattgctaagttagcagtggtgtctccttttttttttttaatttcccttatgtaggctggcagtcaagaggatcaaggcatggaagagtaagcggcttgacccacgcaatgaattctttgatgttacatcagttggtttagcatcgttttttactatgatgtaggcgtgtcaacatagtgtgtgggtagttctaaagctgaaatctgggaagtaatttgaactatcggagtagtagtgagaattcctgggtcaagtattctagatgggagggttggaaagctgaacttattttcgccgggtgaaagctgaacttattgcaatgtagttttctgtttagctggtagtgtaaaatatacgtgttcattctaatactagtgtttactatgtgctcttgtaccagttgactttcaatggacagccatggtggaatggccataggcgcatctgatctgtttatgcgatggtgattgacaggaaggaggcatcatccctcctgatgcagtaacttgcgggcgatacttcgaggcgaacaagtgtaacaagaagaagtgatcagccacatgatgggtcagtgcctcgctttgtatgtgccgtgcatcttctttcaagacagaaagttaagagttgaagagcaagaaattcagagttcgcaagggaagatgagagctctcccaggagagaatcaaaagcttacatggaactaaaggtggtagacttcaagaatattggaagtgatcagaatagagccaaatcttgtaattacagctattcatttgcattactttgactcgcttgtgcattcatcttaggcttagcaggtttgtaaaatttctctcttgaaattgtattagttggtacttgtaaagtgagcatactttacgaacctgtactgtgcaaaattacatggactgaagttgtatgaaagtgtgtgaaacttgaatgttagcttgttttcgaagaacgggaagtagtattcatgctagatcatgagcccagcgaattggaccggaccagtgctaattggtcagataagtcatctctggctggctgcccagcgtacatccataaccgtgctgtgtaacattgcttgctgagatgctgaagtgtgtagtattcatcagtggatggacttggtcaggaactttgtgctacgtcagagtgaatatgcatggtatggtcagaaaaggctggggtacagttgtggcatgactcgaggctttgttcttcacgacttgaaatccaaagtccataatctttgcctctacagtctgaacaaatcttgtcagaatgaacaaactttcacaattctatataaacagaaccccacatctcatcttccatcacaacaatctcacaacccatttgcacacaacccaaatttcaaactaaaacttcttcacctgaaactacatacccaatggcatctcaaattgagagccaccgtgccagcgcggagatcgtcaatggagatgccatctgcaggaagaagtccattgagctgctggaagaacttggcctccccaagggcctcctgccattggaggacatcgaggagttcggctacaacagggacactggattcatgtggatggtgcagaggaagaagaagatcgagcacaccttcaagaagatcaagcagaccgtttcctacgccggcgaggtcacggcgttcgtcgagaaggggaagctgaagaagatcaccggcgtgaagaccaaggagctgctgctctggctcagcgtcgtcgaggtgtacgtcgccgaggcctcgccggagaaggtcaccttcaagactggaaccgggctctctgataacttcgatgccactgcttttgctctcggggagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0120500, RefSeq:Os07g0120500