Os07g0120700

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Revision as of 08:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0120700| Description = Conserved hypothetical protein| Version = NM_001065316.1 GI:115470364 GeneID:4342280| Length = 5317 bp| Definition ...")
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Gene Name

Os07g0120700

Description

Conserved hypothetical protein

Version

NM_001065316.1 GI:115470364 GeneID:4342280

Length

5317 bp

Definition

Oryza sativa Japonica Group Os07g0120700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1095381..1100697

Sequence Coding Region

1095839..1095875,1096014..1096304,1096391..1096470,1096953..1097052,1097143..1097204
,1097650..1098117,1098298..1098924,1099014..1099100,1099804..1099905
,1100265..1100348,1100432..1100548

Expression

GEO Profiles:Os07g0120700

Genome Context

<gbrowseImage1> name=NC_008400:1095381..1100697 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1095381..1100697 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctctggtctcctagtcctagcctatcactccgtgcgcgccgctcacaggaacccaagccgccggccacgcggctcacacgggaggacgagcggcggatcctcctcgcgctctcccgagtaagtaaggcgattcgaggatgggaagaggaagaggaggaagaggaggaggaggacgacgacgaagggtgcgaattggatcaggagattatttcatgttccgcggaagttcacagttgcagtttaccagctaaccagcattttgatgatggatttagctgcctggccaatattatctccatattggttggcttctttggtttctgtagcagttatgttaaacactcagctgggaatatcctgattgtcatctctgactctctaatgaagtttgaggttgtttggattcaatttgttgagctggtctggatagctatacatacagtatcaacatgcgctcatagtgctttaccttctttaattgactccatcagcagtttcagaaaagactcgatttgctattgctctgttatggaaagtctaagtcacgacattattatttcaagcaccaatatcacaagcttcgtggaattacttcagctacggtgtcttgatatcaatgggcatatggtggccagtctctttcgagtactgcacactattttaaagttccttaaacacactgataatgaactgaaagaggacttcatttgtatatctgctcatcatattcttatggttgattgggatttgtattatcaactcaatgttggagaacctctaaaccttgtcaaggatagcacatttagcttgagtgatgatttgaaacagttaggatttctttcaagcagtctcctccaactattgtgctctttacttgagcaaagtgacctggaagacaacaatggacaagatatctatgctaagcttgtaggtgtaattcctaagttagtggctatattaccagagcatcaggatgcccccaaaagtctctctcagtacttaaagcacaaatttctgatgataatgatgcggctaaagccttacatccagaaggattgctcatatattgtttgctgcctgaaattacttcgacaacatttccaggatcttcttcatgaacctataatgcaacatattgctaaaccagaaaactgtttggaaggatccccatttttgttgagcactgtaggtctgggtgagactcatgataaatccactaggcacttacaaagacaggctatgtatttgtttcttagcttttgcatatgtttggctcacaatggcaatgacagtgcactgcaatgttcatgcaagagagacgatcaaatgcttggtcacaaagttctagactgcagtgatcattgtgactgttttgccttatcagaaatttcagactggtttcagagatgtttcttagataagatttttggcttcaaatcatctacagacaatgctctgtgctttctgcagttatatatggaggaggatgacatgctgttcaacgttctcttacaacttcttgatgctccactcatttcctcgaaaatagatagcatggagaatagatgggcttctgaactgattggtggcaaactgttctcgagcatttttgacccagttcatgttttccatctcttgcttttattgctgcactatgatcacttggtgcttgttgattatctgatatctaaagatgtaggtgtgcattgcgcacagtatctgttaaggtgcttacgcctggtaacccaatgttggcattctttcactgatgattcaatttatgaggcaaaaatagagaaacttaactttaaaaggcagaagaccttcaatgatgcaaatagtagcagtggtagctcaattgaaggccctaagttaggttctgcatgtcataagaaaagcaagaacaaacacaagctttttctaaatgctaaagcatgcctcctttcattgaagagaacactggaagatcttcataggaagggtctgttcccttacaatccaaagcctctcctcaagagcttggccaggtttgaggagctttgtgagcaggattga</cdnaseq>

Protein Sequence

<aaseq>LWSPSPSLSLRARRSQEPKPPATRLTREDERRILLALSRVSKAI RGWEEEEEEEEEEDDDEGCELDQEIISCSAEVHSCSLPANQHFDDGFSCLANIISILV GFFGFCSSYVKHSAGNILIVISDSLMKFEVVWIQFVELVWIAIHTVSTCAHSALPSLI DSISSFRKDSICYCSVMESLSHDIIISSTNITSFVELLQLRCLDINGHMVASLFRVLH TILKFLKHTDNELKEDFICISAHHILMVDWDLYYQLNVGEPLNLVKDSTFSLSDDLKQ LGFLSSSLLQLLCSLLEQSDLEDNNGQDIYAKLVGVIPKLVAILPEHQDAPKSLSQYL KHKFLMIMMRLKPYIQKDCSYIVCCLKLLRQHFQDLLHEPIMQHIAKPENCLEGSPFL LSTVGLGETHDKSTRHLQRQAMYLFLSFCICLAHNGNDSALQCSCKRDDQMLGHKVLD CSDHCDCFALSEISDWFQRCFLDKIFGFKSSTDNALCFLQLYMEEDDMLFNVLLQLLD APLISSKIDSMENRWASELIGGKLFSSIFDPVHVFHLLLLLLHYDHLVLVDYLISKDV GVHCAQYLLRCLRLVTQCWHSFTDDSIYEAKIEKLNFKRQKTFNDANSSSGSSIEGPK LGSACHKKSKNKHKLFLNAKACLLSLKRTLEDLHRKGLFPYNPKPLLKSLARFEELCE QD</aaseq>

Gene Sequence

<dnaseqindica>4823..4859#4394..4684#4228..4307#3646..3745#3494..3555#2581..3048#1774..2400#1598..1684#793..894#350..433#150..266#aattcgaatccaccggaaggggagaggcggcgcgacgcgaatggcgcggcggcggcgggagaggcggcagctcgctcgcctctgcgacctcgtcgcctgcgcactcctcccccacctcgtaagcagctctctgcactggcctctgatgactctggtctcctagtcctagcctatcactccgtgcgcgccgctcacaggaacccaagccgccggccacgcggctcacacgggaggacgagcggcggatcctcctcgcgctctcccgagtaatcctctcactagggttcgcgattgttactgctgcgctctattgcccttcccttccgtgatttttttgggatttttttaggtaagtaaggcgattcgaggatgggaagaggaagaggaggaagaggaggaggaggacgacgacgaagggtgcgaattggatcaggtattgcctccgatagcctttttttggtcagtttgattgttgaactgctgtaggtttagtcgaaattatgcgactgactgagcatttgctttatattggggttgaggaattagaacgtaatgataaaatctattattagcacatggctttaaccctgtagtgtaaggtatcatcacggagcagagagggagtggtttgggattgtgatgatgatgtagaatggcttgtgaaatgtctttatggcatcaaattacttagttcatgtagtaactgatttctgttttgtgagggaatttgtttgattctgtcactcaggttccaagtattacattcatttgtttcttaccctttttctttaggagattatttcatgttccgcggaagttcacagttgcagtttaccagctaaccagcattttgatgatggatttagctgcctggccaatattatctccatattggtaagaatatttcatatacagctttgttgcgtcagccatcaactttccaatcatagtcagcgggatcctcatatggtcccagttcctcataaccacctgttacagtattaaatatgaagtgcacaatattacccttcgtccctgccattgagcaatggctctttagactaaatacatctggcactttttatgctactatgaaccaataagtaattgttggggtctttgggaagcgaagggttctgggtgctagtgcctgactgcctgagtcattcattgtttatatagcaacacaaagacaatgagcaacactggattagtcttcattttcattaaccttaatcttttacatttgttcaggcatattggcatcaggatatataagtagggcataggcgttatcccgatcacctgtgggtctctatcaacaactttgaatcatgtcatttgatccgtaagtagtgttaatgtgtcatccactcttaccaatagaaaagggaggcatgaaaaaataacaacaaaattaaccagaggaagttgttgaaactgtggctccacaaaaattttaaactacgtatactgcttcagaattagatattattgacaattgtggtgactgtatactgttttattacatttcgtaccctcatgctttttttcttcaacagcttactttgttagtatatgacatcatccttttcaggttggcttctttggtttctgtagcagttatgttaaacactcagctgggaatatcctgattgtcatctctgactctctaatgaagtttgtaagcttctcatgctttctcattttcaatctgatccacacttctctctcaaaaatatttattattccatggttgttgctctattttaggaggttgtttggattcaatttgttgagctggtctggatagctatacatacagtatcaacatgcgctcatagtgctttaccttctttaattgactccatcagcagtttcagaaaagactcgatttgctattgctctgttatggaaagtctaagtcacgacattattatttcaagcaccaatatcacaagcttcgtggaattacttcagctacggtgtcttgatatcaatgggcatatggtggccagtctctttcgagtactgcacactattttaaagttccttaaacacactgataatgaactgaaagaggacttcatttgtatatctgctcatcatattcttatggttgattgggatttgtattatcaactcaatgttggagaacctctaaaccttgtcaaggatagcacatttagcttgagtgatgatttgaaacagttaggatttctttcaagcagtctcctccaactattgtgctctttacttgagcaaagtgacctggaagacaacaatggacaagatatctatgctaagcttgtaggtgtaattcctaagttagtggctatattaccagagcatcaggatgcccccaaaagtctctctcagtacttaaagcacaaatttctggtaatttcagacatgcaaagattttctattactgcactgacatttttgttgcttttcattttttacgaataagaattgtaaaacagtttttgattaatcaggtgcatataaagttcttctatgaaattaaacattttgtttttggaccatcatcagtctgctatttatttttcaatgcagatgataatgatgcggctaaagccttacatccagaaggattgctcatatattgtttgctgcctgaaattacttcgacaacatttccaggatcttcttcatgaacctataatgcaacatattgctaaaccagaaaactgtttggaaggatccccatttttgttgagcactgtaggtctgggtgagactcatgataaatccactaggcacttacaaagacaggctatgtatttgtttcttagcttttgcatatgtttggctcacaatggcaatgacagtgcactgcaatgttcatgcaagagagacgatcaaatgcttggtcacaaagttctagactgcagtgatcattgtgactgttttgccttatcagaaatttcagactggtttcagagatgtttcttagataagatttttggcttcaaatcatctacagacaatgctctgtgctttctgcagttatatatggaggaggtatgcatctgttacaattgcctggtagctaattaaccttgatcaatgttcaaggtagaaaatatgtttcatcttgttggttttgtttaagtagtttttggtaacttggatttggcagtagttgcaagtatgctgtagttgtcttcggaagtgggttgttgtggacataatttgtttccttacagtaggatatttctcatacatttatattactctacactactatagagttgcctgttatgtttggcataagccccagtgaaaaggcatgttagttattacagagaggtgctaatgcttttattccagttgtatttgtcttctctgcactttctgtttttccaaaccaattcatctagatgcttaagttatttgtcagctaagtttgttaattttcctagtgttaagtgttaacataatactgatctgttcctttatactttaggatgacatgctgttcaacgttctcttacaacttcttgatgctccactcatttcctcgaaaatgtaagcaaagagtaaagcagtttgtcttagaaagttatccagatctgggtgtagttaaaagttatgctctttttttttctgaacttgcagagatagcatggagaatagatgggcttctgaactgattggtggcaaactgttctcgagcatttttgacccagttcatgttttccatctcttgcttttattggtgagtcagtgaaaatacttttacttcatgtcactaggtttataagaagcacaactctctgcatggtggattggtggcattttaaatttcagttcttgttcatttctctgcacaggcatactgctgtatgtagtaaaaatatagtagcaagctttagtaatcagcagtgttcaaaactgtttaagataggggggcatcctttactatttatttggttgcggattccttcttaccgtagcttgtactcaaaaaaaaataaataagacactcttatttatgttccatgttctttcaagttcagacaatcatatggagggttatacaatgtgtaaagggacattacaaacttaataaagtctcatgcatttgctggctcatgcaccattacttttctgtagatttccaatttcttcttctgattccactctacaatatgagtcttgaggataatagtatttgtttattttaatgtcattctgcagctgcactatgatcacttggtgcttgttgattatctgatatctaaagatgtaggtgtgcattgcgcacagtatctgttaaggtcagtttgtacctacaaatccttgtatataaacagcataacagaggtgccttctccacattatgatatctgttactctatctcaggtgcttacgcctggtaacccaatgttggcattctttcactgatgattcaatttatgaggcaaaaatagagaaacttaactttaaaaggcagaagaccttcaatgatgcaaatagtagcagtggtagctcaattgaaggccctaagttaggttctgcatgtcataagaaaagcaagaacaaacacaagctttttctaaatgctaaagcatgcctcctttcattgaagagaacactggaagatcttcataggaagggtctgttcccttacaatccaaagcctctcctcaagaggtttgtggtcatggtcatatgtcttctatgcttttcagtgaaattgtgattatgctgctgttttctccctttttttcacttataaagctccattgatatgaaccatgcaatgtaatgattagtttttggctgttgcagcttggccaggtttgaggagctttgtgagcaggattgaaatttgagtagcatgttgttacatgctactcgtggaatgaccttctggtaatcagtttatcctttgctctggtctttatgttgtatggtccgattcatgcaacaaacaaatgttgaattaatcttctgttctccacaaggctcatccgccgtttggcatccttgtcagggtggccgctgcaaaatggaggtgcaatcagcttgattatcttctcttgatttactagtatacctttagccctacttttctgggcctaatttcatgttgcttatgagttacatgaaccattagcagtgaaatactcattctcctgtctcgccttaaaactgattgatcattttcatacgtgaacactagcctgccccttgaaacgaatgaaattatcctgtacatgttactttctaactgaactctcctgctacatcaatacatataaggcatttcttgcctaagttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0120700, RefSeq:Os07g0120700