Os07g0123500

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0123500| Description = Thioredoxin-related domain containing protein| Version = NM_001065333.2 GI:297606657 GeneID:4342298| Length = 3935 b...")
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Gene Name

Os07g0123500

Description

Thioredoxin-related domain containing protein

Version

NM_001065333.2 GI:297606657 GeneID:4342298

Length

3935 bp

Definition

Oryza sativa Japonica Group Os07g0123500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1212610..1216544

Sequence Coding Region

1212858..1213805,1214982..1215617

Expression

GEO Profiles:Os07g0123500

Genome Context

<gbrowseImage1> name=NC_008400:1212610..1216544 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1212610..1216544 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaattcaggtttggaaggcttgatggtcagccagcaaagatcagaaatgtccccattgctgtcacacctgaaggattctggtgctgcccgtcgcaggccatcctccagaagtcgatgaagaaccaaaatcagcatgccagaccaaagggaggagcatccccatctgtgtccaaggcatcctcagttcagaggactccaactatttctttggagaaaagaacacactctactcctactaggtctagaaccaattcagatgagcaggtactgcctccagcagatgatgctatccctgatcaaccaaaggtatcaccagtgccagacaagagacataataagcaacacaagatatcggtcggattcggtcagcttcacacgagtgatttgaaggttatgctttatggcagggaaggggttgctgtaaaaatgattgttcacaagaacatccttgctgaaaatagtactttctttgctgataagctctctaggcaatctccagtgtcatgcattgaggtatcggattgcgaggatgtggagatttttgttgagactgttgggttgatgtattgcaaggatgttaagcagagactgatcaagcaagctgttgcgcgggttcttcgaatcttgaaggttgcagaatcactaggtttcccaacatgcatcatgtcatgcttaaattatttggaagcagtgccttgggttggtgatgaggaagaaaatgtgttatcatcgatacggcaacttcactgtgagaattatggagttagccccctcctgaaaagagtagcatctgacctaacaaatccacctagtgacacccttgcacatatcattgagttggtgctgaaaagcagcgatgacagagggcggcgcgagatgaaatctttggtcctgaagcttttgaaggagaataacatctggaccaacggttcatcggattcctgtgtagtgacattctacagttcttgccggaattgcttggaatcactatcgaacttgtttcgccaagcttctgaacctgaattttctgagcaatcttcagacagtaaagaggtgatctttagacagatcactctagaggctgataacctcctctggttagctgagatcttagctgacagaaatgcagctgatgagctgacatcaatttgggcaagccagggagagctggccaagctgcattgcaggataccagtgatgcaccggcatctcatcagctgtgtcactgcaaggctcttcgtcgcggtagggaaaggcgaggcgttaccgtctaaggagacgaggcagctcctccttgatgtgtggctccagcctctgatggatgattacaactggttgcagcatggctgcaggtggtttgatcggaaggtcatcgaggaagggatagggcagaccatcctgacgctgccattggaggatcagcagagcattctgctcacctggcttggaagatttctcaaggttggagatagctgcccaaatcttcagagagcattcgaggtgtggtggaggagaacctttgtcaggccttacactgatcagcaagcgagttcttcgtcgcaatcgcgatggagctga</cdnaseq>

Protein Sequence

<aaseq>MEEFRFGRLDGQPAKIRNVPIAVTPEGFWCCPSQAILQKSMKNQ NQHARPKGGASPSVSKASSVQRTPTISLEKRTHSTPTRSRTNSDEQVLPPADDAIPDQ PKVSPVPDKRHNKQHKISVGFGQLHTSDLKVMLYGREGVAVKMIVHKNILAENSTFFA DKLSRQSPVSCIEVSDCEDVEIFVETVGLMYCKDVKQRLIKQAVARVLRILKVAESLG FPTCIMSCLNYLEAVPWVGDEEENVLSSIRQLHCENYGVSPLLKRVASDLTNPPSDTL AHIIELVLKSSDDRGRREMKSLVLKLLKENNIWTNGSSDSCVVTFYSSCRNCLESLSN LFRQASEPEFSEQSSDSKEVIFRQITLEADNLLWLAEILADRNAADELTSIWASQGEL AKLHCRIPVMHRHLISCVTARLFVAVGKGEALPSKETRQLLLDVWLQPLMDDYNWLQH GCRWFDRKVIEEGIGQTILTLPLEDQQSILLTWLGRFLKVGDSCPNLQRAFEVWWRRT FVRPYTDQQASSSSQSRWS</aaseq>

Gene Sequence

<dnaseqindica>2740..3687#928..1563#ggtgctctttactttgcccttcttggcttcttgcttgcttgcttgcttctcctctttgccaccagctctgggaagaagaatggtgtgtgtgattgtgaggctgcccttcttcttgaatcttgattgattgtttggtgcagcatgagcaaggttgtaatgtgaggtacaccctgttctagtattttgtttcttgcagtttgttgcccttcacagtgttctgctagttcttaagttggagggattgtgatttgtgagaatgtgggattttctgttgctatttttttggtcagttttgtcttaggatggcaaaagatgaggggtttggtgtgaattttaatgtgaatttttaggagtgtggaagagtagttcatcttggttcatgtgcttgtttgcccctccgttcttcatgatgctttgcttcagattttgtggtttgaatgggttggagagtcttattttagtggttgaaagttgcaaatttggttattccttcattctgattccaaaggtagttcatttttttatatgtgatgaatatgtacctaatactaggaatgaaatgagagttaatgtactgggtaaagtttaaattccggctctatttcattggggaaaatgtgaatgggagaaaattagctatgttctattaggtaaggaaaaaaaacatgaaaaaggaatcaagaaaagaaagcctgcaagtgcaatgaatcatgccatgttctgttgtttgcttactggagatctttttgactgcatcccctatttcagttattcaggtgaattttgactcttcagttaattattgtatgtctttgttcaggggtgtgcaatagtgccaatcataaggtcaaaagaagatcacatagttgttaaaaaactttctgaatcaatcttctctgaagatacaggcttcttctgaagacaagcatggaagaattcaggtttggaaggcttgatggtcagccagcaaagatcagaaatgtccccattgctgtcacacctgaaggattctggtgctgcccgtcgcaggccatcctccagaagtcgatgaagaaccaaaatcagcatgccagaccaaagggaggagcatccccatctgtgtccaaggcatcctcagttcagaggactccaactatttctttggagaaaagaacacactctactcctactaggtctagaaccaattcagatgagcaggtactgcctccagcagatgatgctatccctgatcaaccaaaggtatcaccagtgccagacaagagacataataagcaacacaagatatcggtcggattcggtcagcttcacacgagtgatttgaaggttatgctttatggcagggaaggggttgctgtaaaaatgattgttcacaagaacatccttgctgaaaatagtactttctttgctgataagctctctaggcaatctccagtgtcatgcattgaggtatcggattgcgaggatgtggagatttttgttgagactgttgggttgatgtattgcaaggatgttaagcagagactgatcaagcaagctgttgcgcgggttcttcgaatcttgaaggtttctcctttgaggctctgatactttctttagttaccaatttcatattattgatatccaggttaaacatgtgcaaatattgttagcatttacagctagatcaagatagttgataatttaaactggtgtactatcaattgctcacccaactaaactatttaaaatgtgtgcttatttacatttagaattgtgttgatcataagaaatcagttgacaaccaagaatgaatctggaatcgccttccttaatttaaatgccttaccattatgcattgttgttcttctcaccaagaacctagttatgtcactaagttagcttaatctgtggcatttttatatgaacatttcacaacttcttttagtaaccttttggaacattgcacattgatacaaagatatgcatcagctagaaaaggtagtattttctctggtcttatatacgcttttattcctaagtatttttgtatggttccaaactacagaaatagcatcccttgtgttaactgaaagtagtaactcgtgtttctgaactcattatactcgaactgacattgttgcacaaaagtacctctataaggtacaactgattatatttcgatgtccatttcatgttgttgaattgagtgcatcttatcttctcaatgataatactgtaccatttcataacccatagaatctgacaaggactgcacttgatagttgatcagtgccaatttaggtaggctgtcgttccttattaactcattatactcgaactgatttttgcaacaaagtatctctacaaggtgcacctgattatatctcgaggtccatttcatattgttgaattgagtgcatcttatctttctgagcaacaatagtaatactgtggtgtcatcacataacccatagaatctgagaaggactgaatatttgacaactttgaaatatcatctagctcagtgatcagttgatagttggacagtgccaatttaggtaggctgtcattcattatcttgtgggacaaatagaaatcggaggaaaacatgttcaccaaatttgaccatggtcttttgtaccctgtctgtctctaaatacatggtcacttttgttaaggattaactgattggattttttcagagcaaacactacttcctctgcttgtagtgtgtcatttatgtgggcttttcctgtacaggttgcagaatcactaggtttcccaacatgcatcatgtcatgcttaaattatttggaagcagtgccttgggttggtgatgaggaagaaaatgtgttatcatcgatacggcaacttcactgtgagaattatggagttagccccctcctgaaaagagtagcatctgacctaacaaatccacctagtgacacccttgcacatatcattgagttggtgctgaaaagcagcgatgacagagggcggcgcgagatgaaatctttggtcctgaagcttttgaaggagaataacatctggaccaacggttcatcggattcctgtgtagtgacattctacagttcttgccggaattgcttggaatcactatcgaacttgtttcgccaagcttctgaacctgaattttctgagcaatcttcagacagtaaagaggtgatctttagacagatcactctagaggctgataacctcctctggttagctgagatcttagctgacagaaatgcagctgatgagctgacatcaatttgggcaagccagggagagctggccaagctgcattgcaggataccagtgatgcaccggcatctcatcagctgtgtcactgcaaggctcttcgtcgcggtagggaaaggcgaggcgttaccgtctaaggagacgaggcagctcctccttgatgtgtggctccagcctctgatggatgattacaactggttgcagcatggctgcaggtggtttgatcggaaggtcatcgaggaagggatagggcagaccatcctgacgctgccattggaggatcagcagagcattctgctcacctggcttggaagatttctcaaggttggagatagctgcccaaatcttcagagagcattcgaggtgtggtggaggagaacctttgtcaggccttacactgatcagcaagcgagttcttcgtcgcaatcgcgatggagctgatgaaaaatggagggtgatgttgcttacacgttgcataatatgtgtaagaacttggtggtattgttagttaggagaacatcagtaagggaagaagaaaaattgtgtaggattagtagtagtgcaggtgctcttttaactgaactgagggtgtgtgtgctgaattgctgattgttcttgtgttgtaatgccttgaaatgtgacagctctctgatttctttgttacaggaataaatcctgtatgatttact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0123500, RefSeq:Os07g0123500