Os07g0124600

From RiceWiki
Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0124600| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001065340.1 GI:115470412 Gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0124600

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001065340.1 GI:115470412 GeneID:4342307

Length

3634 bp

Definition

Oryza sativa Japonica Group Os07g0124600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1280407..1284040

Sequence Coding Region

1280479..1280754,1281232..1282089

Expression

GEO Profiles:Os07g0124600

Genome Context

<gbrowseImage1> name=NC_008400:1280407..1284040 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1280407..1284040 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcgggggcggcggcgggtggggggttcgttggggagaggaggaagctgttcgtgggagggatcccgacgtcggcgcaggaggcggagctgcggggccacttcgggcagtacggggcggtgaggtcggtgatcgtgatgcgggacaaggagaccgggcatggccgggggttcgggttcgtggagttcgaggaggaggaggacgccgccagggcgctcggcgacggggagcaccccaggcacctcatctgcggccgcgtcgttgatgtcaagagggctagggcaaggcctcaacgaaaccatgatgatcaatcttcacagcatcagcacttcggacagggtcaggatcagggtcaccagccagcacctgtgagtggtacagaggatggcggcgacggcatgaactatgcttcgaagaaggtctttattggtggtctgcgggacaacatcactgaggaggagttcaagacatatttcgagagttttggcaccgtaacagatgtggtagtcatatatgacagtatgacaaacaggtctagggggtttggtttcgtcacctttgactcagaggaagcggtgaggaaggtgatagaacacagttttcatgacttgaaaggaacaagggtagaagccaagattgccatccccaaggatgcttcgtattaccgtaatggcagaggtcgtggctcaagaaactttggtggaaggggtcatgctggttttgatggtccctcgtaccaaccatacaatgacagatatggtttctacaacagctataatatgcctcaacctgttccaccacatccctactatcctggtgtatattatggtatgggaggaggttatccctatgcgaatgcatattcaaacatgggagcccctgctaatattcctccaggcatgatgacaaggcgtccagtttatggtgcatatcctccaatgtttccagggtacggcgttatatatagaggttatgtgggtgctgcaccctctattcagcatgatagtaatggtgggagcgatagcaaaaaggatcaaacttcagtagatgtacaagaagttgacagtgctgcttccgttgcaacaaaacttgagtttatgaagctagggtcacaatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAGAAAGGGFVGERRKLFVGGIPTSAQEAELRGHFGQYG AVRSVIVMRDKETGHGRGFGFVEFEEEEDAARALGDGEHPRHLICGRVVDVKRARARP QRNHDDQSSQHQHFGQGQDQGHQPAPVSGTEDGGDGMNYASKKVFIGGLRDNITEEEF KTYFESFGTVTDVVVIYDSMTNRSRGFGFVTFDSEEAVRKVIEHSFHDLKGTRVEAKI AIPKDASYYRNGRGRGSRNFGGRGHAGFDGPSYQPYNDRYGFYNSYNMPQPVPPHPYY PGVYYGMGGGYPYANAYSNMGAPANIPPGMMTRRPVYGAYPPMFPGYGVIYRGYVGAA PSIQHDSNGGSDSKKDQTSVDVQEVDSAASVATKLEFMKLGSQ</aaseq>

Gene Sequence

<dnaseqindica>73..348#826..1683#gtccgccgctcccaccaccctcgtctctcccctccacttcgcgagacctccaaaaccctagtttcgtcggcgatggcggcggcggcggcggcgggggcggcggcgggtggggggttcgttggggagaggaggaagctgttcgtgggagggatcccgacgtcggcgcaggaggcggagctgcggggccacttcgggcagtacggggcggtgaggtcggtgatcgtgatgcgggacaaggagaccgggcatggccgggggttcgggttcgtggagttcgaggaggaggaggacgccgccagggcgctcggcgacggggagcaccccaggcacctcatctgcggccgcgtcgtgagtttttttttttttgcctttttgggactgattcgatctactactctttgctcactttgctttgcttgccccctccctcgtttgtttacttatatgtggtggagattggagaatgcgcggtgtgtgatttgccgtcgaaagcttggagcatggtgttttttttttttgaagatctattaatattggcgaagttggtggtagcctattgcttggtcaatttatttatttattttgcttattaatctggtagtaccgtcatgcatgggagaaaattcttcgatttcttcgtattcatggctaaattgtaattatggactgttctaaaaaaaattgtagtcaaggaaagcaacgttacccagattctgttagttgcctcatcttcagtgtagtttgactcgttcgatgggaaaagtttgtggctatgatgttgattgcactattaattgatgtaagtttggtggtccttttgcacaggttgatgtcaagagggctagggcaaggcctcaacgaaaccatgatgatcaatcttcacagcatcagcacttcggacagggtcaggatcagggtcaccagccagcacctgtgagtggtacagaggatggcggcgacggcatgaactatgcttcgaagaaggtctttattggtggtctgcgggacaacatcactgaggaggagttcaagacatatttcgagagttttggcaccgtaacagatgtggtagtcatatatgacagtatgacaaacaggtctagggggtttggtttcgtcacctttgactcagaggaagcggtgaggaaggtgatagaacacagttttcatgacttgaaaggaacaagggtagaagccaagattgccatccccaaggatgcttcgtattaccgtaatggcagaggtcgtggctcaagaaactttggtggaaggggtcatgctggttttgatggtccctcgtaccaaccatacaatgacagatatggtttctacaacagctataatatgcctcaacctgttccaccacatccctactatcctggtgtatattatggtatgggaggaggttatccctatgcgaatgcatattcaaacatgggagcccctgctaatattcctccaggcatgatgacaaggcgtccagtttatggtgcatatcctccaatgtttccagggtacggcgttatatatagaggttatgtgggtgctgcaccctctattcagcatgatagtaatggtgggagcgatagcaaaaaggatcaaacttcagtagatgtacaagaagttgacagtgctgcttccgttgcaacaaaacttgagtttatgaagctagggtcacaatgactttctggtgagttctaaaaaccctcagatttaatcttttatcctagccacacatgaaaactaatcttatttaattatccatgaagaactatgattattcaaatagttgttaaatgattgctgctaggtacttcaattgttaaactatgactattcaatcataaattattagttgtgaggttttagtgacttcctggtgattttgtgttaatatgatgcatagcctccaatctatatagcttgttttgattccttgattgttctttgtcgatagctaattatgcactatatgcccaattagctaaacattgggaacctgtaacatattccagatactgtatacttatgcaaagtgcgtggaataagtttaatgccagactctagcttagcattctaccctttgaaacaaaacggatggatttttttgttgcataccatgccagatggtcatggatgtggctgtgctggtgtctagtttatttgattagaatacagcagctatgtatttttttagtacaatgacagcactagctagacaccaaagtccagtacaacaatagcaagaactaaactgcgatcattatatccgattaaacctgtgcttaattaaatgcattgaaaaactgaagattaatgttgattcatcacatgtcaattgagtaatatgtcctacaatgagttgagtgaaatgtatagcttgaaagcttgtgctaggattttgttccttgaaatccattgccacttgtgagtagttcatgcttaaattcggtatatcccgaaatcagtgttcttccccaatattacaagtatggtctatgctagtaattatatctttagtgtatacatcatgatacctcacaataaaatatggaacatgggagttatttttatttttatgcatctatgctgatcagcattgatctcttttgtgcttaaacgaatgaatccttattacttgaaatttagaactaaacaaagatgtaagctcatgttattgactgaatgtattatcccaactgccaaggttttgggcaagtttgctgttttacagtttttaaggctgtttaagtaccattttaatcaaggttattaatttcctagtattagtttgtgttgcttagcatttttctattttctatctattatgcctctacaccacttgcatagtacatagtgctttgtagcagttcttaacacagggttaacagtttaaggctgtagaaacctagttccatgggtttacccagatcagggttatgttttggcctggcctgtctggctgcctgcctttctaagtttctatgtgaatttccactgcatgcatggtggtttggcaaactgagtttgaacaagtttgttcagcaatattagtagtatttggcttgtttgcttgttcttatttccagttatcatgtccaccgaacctgtattctcttcattgtgaaaatatccagttgttatcctttttaagatttacatatagtccaatctatatattcgttaaagagggcaatctgtttattcttctcaatttatgaagtctactgtacctaatccagttgttatccttttaaagaattacatattctccaatctatgttcaatcaatttgtgaataatctactgtactgaattggtgtccttcataattattatgtttatttggtgttgatgctcctatgaactatttgcttgttttctttttgagacaggacaaattacttctaaattgatgacaccagagttcgacattttgggaaccctcaattgtgaagacttgagctgagattctttggttgacaagtacatcattggaattcaacttacccaccctcattccttgcttcatctgcctgtacactgaaaacgtgcaagttgacctcactgcttcttgtaccgatgtttaaattctttgttgatttaatgtaccaggatcagaacatccaatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0124600, RefSeq:Os07g0124600